RNA–Protein interactions for RNA: ENST00000463423.5

CTPS1-204, Transcript of CTP synthase 1, humanhuman

TSL 5

Gene CTPS1, Length 457 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-204ENST00000463423 MBIPQ9NS73 344 aa7.91□□□□□ -1.14
CTPS1-204ENST00000463423 MIS18AQ9NYP9 233 aa7.91□□□□□ -1.14
CTPS1-204ENST00000463423 TSPYL4Q9UJ04 414 aa7.91□□□□□ -1.14
CTPS1-204ENST00000463423 CCNL1Q9UK58 526 aaPredicted RBP7.91□□□□□ -1.14
CTPS1-204ENST00000463423 COL24A1Q17RW2 1714 aa7.91□□□□□ -1.14
CTPS1-204ENST00000463423 ZBED9Q6R2W3 1325 aa7.9□□□□□ -1.14
CTPS1-204ENST00000463423 CNTNAP4Q9C0A0 1308 aa7.9□□□□□ -1.14
CTPS1-204ENST00000463423 E9PSI1 815 aa7.9□□□□□ -1.14
CTPS1-204ENST00000463423 PTCD1O75127 700 aaKnown RBP7.9□□□□□ -1.14
CTPS1-204ENST00000463423 CYP19A1P11511 503 aaPredicted RBP7.9□□□□□ -1.14
CTPS1-204ENST00000463423 ITPK1Q13572 414 aa7.9□□□□□ -1.14
CTPS1-204ENST00000463423 AKT1S1Q96B36 256 aa7.9□□□□□ -1.14
CTPS1-204ENST00000463423 RBM42Q9BTD8 480 aaKnown RBP7.9□□□□□ -1.14
CTPS1-204ENST00000463423 MYH16Q9H6N6 1097 aa7.9□□□□□ -1.14
CTPS1-204ENST00000463423 STARD3NLO95772 234 aa7.89□□□□□ -1.15
CTPS1-204ENST00000463423 HNRNPUQ00839 825 aaKnown RBP eCLIP7.89□□□□□ -1.15
CTPS1-204ENST00000463423 NBPF14Q5TI25 921 aa7.89□□□□□ -1.15
CTPS1-204ENST00000463423 USP16Q9Y5T5 823 aa7.89□□□□□ -1.15
CTPS1-204ENST00000463423 NUP98P52948 1817 aa7.89□□□□□ -1.15
CTPS1-204ENST00000463423 ERBB4Q15303 1308 aa7.88□□□□□ -1.15
CTPS1-204ENST00000463423 RPS6KA4O75676 772 aa7.88□□□□□ -1.15
CTPS1-204ENST00000463423 SLC15A2Q16348 729 aa7.88□□□□□ -1.15
CTPS1-204ENST00000463423 INTS5Q6P9B9 1019 aaKnown RBP7.88□□□□□ -1.15
CTPS1-204ENST00000463423 LINC00116Q8NCU8 138 aa7.88□□□□□ -1.15
CTPS1-204ENST00000463423 FLAD1Q8NFF5 587 aa7.88□□□□□ -1.15
CTPS1-204ENST00000463423 ZNF428Q96B54 188 aa7.88□□□□□ -1.15
CTPS1-204ENST00000463423 SALL2Q9Y467 1007 aaPredicted RBP7.88□□□□□ -1.15
CTPS1-204ENST00000463423 LAS1LQ9Y4W2 734 aaKnown RBP7.88□□□□□ -1.15
CTPS1-204ENST00000463423 C4AP0C0L4 1744 aa7.87□□□□□ -1.15
CTPS1-204ENST00000463423 FANCIQ9NVI1 1328 aa7.87□□□□□ -1.15
CTPS1-204ENST00000463423 RGL2O15211 777 aa7.87□□□□□ -1.15
CTPS1-204ENST00000463423 VAMP4O75379 141 aa7.87□□□□□ -1.15
CTPS1-204ENST00000463423 CT47B1P0C2W7 299 aaPredicted RBP7.87□□□□□ -1.15
CTPS1-204ENST00000463423 IL6STP40189 918 aaPredicted RBP7.87□□□□□ -1.15
CTPS1-204ENST00000463423 CRKLP46109 303 aaKnown RBP7.87□□□□□ -1.15
CTPS1-204ENST00000463423 KCNQ4P56696 695 aa7.87□□□□□ -1.15
CTPS1-204ENST00000463423 DUSP27Q5VZP5 1158 aa7.87□□□□□ -1.15
CTPS1-204ENST00000463423 DNAJC10Q8IXB1 793 aa7.87□□□□□ -1.15
CTPS1-204ENST00000463423 C8orf58Q8NAV2 365 aa7.87□□□□□ -1.15
CTPS1-204ENST00000463423 CASZ1Q86V15 1759 aa7.87□□□□□ -1.15
CTPS1-204ENST00000463423 SSFA2P28290 1259 aa7.86□□□□□ -1.15
CTPS1-204ENST00000463423 EIF5P55010 431 aaKnown RBP7.86□□□□□ -1.15
CTPS1-204ENST00000463423 PDIA6Q15084 440 aa7.86□□□□□ -1.15
CTPS1-204ENST00000463423 SLC16A10Q8TF71 515 aa7.86□□□□□ -1.15
CTPS1-204ENST00000463423 TSR2Q969E8 191 aaKnown RBP7.86□□□□□ -1.15
CTPS1-204ENST00000463423 CDCA7LQ96GN5 454 aa7.86□□□□□ -1.15
CTPS1-204ENST00000463423 CCDC87Q9NVE4 849 aa7.86□□□□□ -1.15
CTPS1-204ENST00000463423 STK32BQ9NY57 414 aa7.86□□□□□ -1.15
CTPS1-204ENST00000463423 BCORQ6W2J9 1755 aa7.85□□□□□ -1.15
CTPS1-204ENST00000463423 SENP3-EIF4A1A0A087X0R7 540 aa7.85□□□□□ -1.15
CTPS1-204ENST00000463423 PRAMEF22A3QJZ6 481 aa7.85□□□□□ -1.15
CTPS1-204ENST00000463423 A1BGP04217 495 aa7.85□□□□□ -1.15
CTPS1-204ENST00000463423 EXOSC9Q06265 439 aaKnown RBP7.85□□□□□ -1.15
CTPS1-204ENST00000463423 TWISTNBQ3B726 338 aaPredicted RBP7.85□□□□□ -1.15
CTPS1-204ENST00000463423 TRAPPC3LQ5T215 181 aa7.85□□□□□ -1.15
CTPS1-204ENST00000463423 CCDC30Q5VVM6 783 aa7.85□□□□□ -1.15
CTPS1-204ENST00000463423 LRP10Q7Z4F1 713 aa7.85□□□□□ -1.15
CTPS1-204ENST00000463423 TSPYL6Q8N831 410 aa7.85□□□□□ -1.15
CTPS1-204ENST00000463423 DDX21Q9NR30 783 aaKnown RBP eCLIP7.85□□□□□ -1.15
CTPS1-204ENST00000463423 DBF4Q9UBU7 674 aaPredicted RBP7.85□□□□□ -1.15
CTPS1-204ENST00000463423 RTCBQ9Y3I0 505 aaKnown RBP7.85□□□□□ -1.15
CTPS1-204ENST00000463423 A0A087WZG4 1122 aa7.84□□□□□ -1.15
CTPS1-204ENST00000463423 NBPF26B4DH59 902 aa7.84□□□□□ -1.15
CTPS1-204ENST00000463423 BRPF1P55201 1214 aaPredicted RBP7.84□□□□□ -1.15
CTPS1-204ENST00000463423 ZNF827Q17R98 1081 aa7.84□□□□□ -1.15
CTPS1-204ENST00000463423 KRT24Q2M2I5 525 aa7.84□□□□□ -1.15
CTPS1-204ENST00000463423 NBPF10Q6P3W6 841 aaKnown RBP7.84□□□□□ -1.15
CTPS1-204ENST00000463423 NBPF15Q8N660 670 aa7.84□□□□□ -1.15
CTPS1-204ENST00000463423 AK7Q96M32 723 aa7.84□□□□□ -1.15
CTPS1-204ENST00000463423 ANO8Q9HCE9 1232 aaPredicted RBP7.84□□□□□ -1.15
CTPS1-204ENST00000463423 HYPKQ9NX55 129 aa7.84□□□□□ -1.15
CTPS1-204ENST00000463423 TFCP2L1Q9NZI6 479 aa7.84□□□□□ -1.15
CTPS1-204ENST00000463423 ANKRD36CQ5JPF3 1778 aa7.84□□□□□ -1.15
CTPS1-204ENST00000463423 PNPLA7Q6ZV29 1317 aa7.83□□□□□ -1.16
CTPS1-204ENST00000463423 ERVV-1B6SEH8 477 aa7.83□□□□□ -1.16
CTPS1-204ENST00000463423 ALDH1L2Q3SY69 923 aa7.83□□□□□ -1.16
CTPS1-204ENST00000463423 HDGFL1Q5TGJ6 251 aa7.83□□□□□ -1.16
CTPS1-204ENST00000463423 CLEC4GQ6UXB4 293 aa7.83□□□□□ -1.16
CTPS1-204ENST00000463423 COL23A1Q86Y22 540 aaPredicted RBP7.83□□□□□ -1.16
CTPS1-204ENST00000463423 ARHGEF1Q92888 912 aaKnown RBP7.83□□□□□ -1.16
CTPS1-204ENST00000463423 NARFQ9UHQ1 456 aa7.83□□□□□ -1.16
CTPS1-204ENST00000463423 ZBTB1Q9Y2K1 713 aa7.83□□□□□ -1.16
CTPS1-204ENST00000463423 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.82□□□□□ -1.16
CTPS1-204ENST00000463423 ELL2O00472 640 aaPredicted RBP7.82□□□□□ -1.16
CTPS1-204ENST00000463423 GNPATO15228 680 aa7.82□□□□□ -1.16
CTPS1-204ENST00000463423 EIF2S2P20042 333 aaKnown RBP7.82□□□□□ -1.16
CTPS1-204ENST00000463423 CANXP27824 592 aaKnown RBP7.82□□□□□ -1.16
CTPS1-204ENST00000463423 AMIGO3Q86WK7 504 aa7.82□□□□□ -1.16
CTPS1-204ENST00000463423 AFDNP55196 1824 aaKnown RBP7.82□□□□□ -1.16
CTPS1-204ENST00000463423 SCN7AQ01118 1682 aa7.82□□□□□ -1.16
CTPS1-204ENST00000463423 COL15A1P39059 1388 aa7.82□□□□□ -1.16
CTPS1-204ENST00000463423 ARFGEF2Q9Y6D5 1785 aa7.82□□□□□ -1.16
CTPS1-204ENST00000463423 NRXN2Q9P2S2 1712 aa7.81□□□□□ -1.16
CTPS1-204ENST00000463423 KIF13BQ9NQT8 1826 aa7.81□□□□□ -1.16
CTPS1-204ENST00000463423 SLC4A2P04920 1241 aa7.81□□□□□ -1.16
CTPS1-204ENST00000463423 RFC4P35249 363 aa7.81□□□□□ -1.16
CTPS1-204ENST00000463423 NLGN1Q8N2Q7 840 aa7.81□□□□□ -1.16
CTPS1-204ENST00000463423 CHPF2Q9P2E5 772 aa7.81□□□□□ -1.16
CTPS1-204ENST00000463423 USP42Q9H9J4 1324 aaKnown RBP7.8□□□□□ -1.16
CTPS1-204ENST00000463423 ZPR1O75312 459 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms