RNA–Protein interactions for RNA: ENST00000462813.1

DCTN1-216, Transcript of dynactin subunit 1, humanhuman

TSL 1 (best)

Gene DCTN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN1-216ENST00000462813 E9PSI1 815 aa23.15■■□□□ 1.3
DCTN1-216ENST00000462813 CRKLP46109 303 aaKnown RBP23.15■■□□□ 1.3
DCTN1-216ENST00000462813 SLFN5Q08AF3 891 aa23.15■■□□□ 1.3
DCTN1-216ENST00000462813 NBPF14Q5TI25 921 aa23.15■■□□□ 1.3
DCTN1-216ENST00000462813 AKT1S1Q96B36 256 aa23.15■■□□□ 1.3
DCTN1-216ENST00000462813 CDCA7LQ96GN5 454 aa23.15■■□□□ 1.3
DCTN1-216ENST00000462813 STK32BQ9NY57 414 aa23.15■■□□□ 1.3
DCTN1-216ENST00000462813 USP16Q9Y5T5 823 aa23.15■■□□□ 1.3
DCTN1-216ENST00000462813 BCORQ6W2J9 1755 aa23.14■■□□□ 1.3
DCTN1-216ENST00000462813 STARD3NLO95772 234 aa23.14■■□□□ 1.29
DCTN1-216ENST00000462813 AK7Q96M32 723 aa23.14■■□□□ 1.29
DCTN1-216ENST00000462813 SLC15A2Q16348 729 aa23.13■■□□□ 1.29
DCTN1-216ENST00000462813 RC3H1Q5TC82 1133 aaKnown RBP23.13■■□□□ 1.29
DCTN1-216ENST00000462813 DUSP27Q5VZP5 1158 aa23.13■■□□□ 1.29
DCTN1-216ENST00000462813 C8orf58Q8NAV2 365 aa23.12■■□□□ 1.29
DCTN1-216ENST00000462813 CCDC87Q9NVE4 849 aa23.12■■□□□ 1.29
DCTN1-216ENST00000462813 NUP98P52948 1817 aa23.11■■□□□ 1.29
DCTN1-216ENST00000462813 HOXB7P09629 217 aa23.11■■□□□ 1.29
DCTN1-216ENST00000462813 INTS5Q6P9B9 1019 aaKnown RBP23.11■■□□□ 1.29
DCTN1-216ENST00000462813 YTHDC1Q96MU7 727 aaKnown RBP23.11■■□□□ 1.29
DCTN1-216ENST00000462813 SCN7AQ01118 1682 aa23.1■■□□□ 1.29
DCTN1-216ENST00000462813 ELL2O00472 640 aaPredicted RBP23.1■■□□□ 1.29
DCTN1-216ENST00000462813 GNPATO15228 680 aa23.1■■□□□ 1.29
DCTN1-216ENST00000462813 EXOSC9Q06265 439 aaKnown RBP23.1■■□□□ 1.29
DCTN1-216ENST00000462813 TSPYL6Q8N831 410 aa23.1■■□□□ 1.29
DCTN1-216ENST00000462813 TFCP2L1Q9NZI6 479 aa23.1■■□□□ 1.29
DCTN1-216ENST00000462813 ZBTB1Q9Y2K1 713 aa23.1■■□□□ 1.29
DCTN1-216ENST00000462813 A1BGP04217 495 aa23.09■■□□□ 1.29
DCTN1-216ENST00000462813 TRMT2AQ8IZ69 625 aaKnown RBP23.09■■□□□ 1.29
DCTN1-216ENST00000462813 EIF2S2P20042 333 aaKnown RBP23.08■■□□□ 1.29
DCTN1-216ENST00000462813 TWISTNBQ3B726 338 aaPredicted RBP23.08■■□□□ 1.29
DCTN1-216ENST00000462813 SOS1Q07889 1333 aaPredicted RBP23.08■■□□□ 1.28
DCTN1-216ENST00000462813 RPS6KA4O75676 772 aa23.07■■□□□ 1.28
DCTN1-216ENST00000462813 CANXP27824 592 aaKnown RBP23.07■■□□□ 1.28
DCTN1-216ENST00000462813 AMIGO3Q86WK7 504 aa23.07■■□□□ 1.28
DCTN1-216ENST00000462813 NECTIN2Q92692 538 aa23.07■■□□□ 1.28
DCTN1-216ENST00000462813 RTCBQ9Y3I0 505 aaKnown RBP23.07■■□□□ 1.28
DCTN1-216ENST00000462813 COL24A1Q17RW2 1714 aa23.07■■□□□ 1.28
DCTN1-216ENST00000462813 ANKRD36CQ5JPF3 1778 aa23.06■■□□□ 1.28
DCTN1-216ENST00000462813 PIP4K2AP48426 406 aaPredicted RBP23.06■■□□□ 1.28
DCTN1-216ENST00000462813 R3HDM1Q15032 1099 aaKnown RBP23.06■■□□□ 1.28
DCTN1-216ENST00000462813 HDGFL1Q5TGJ6 251 aa23.06■■□□□ 1.28
DCTN1-216ENST00000462813 ARFGEF2Q9Y6D5 1785 aa23.06■■□□□ 1.28
DCTN1-216ENST00000462813 PNPLA7Q6ZV29 1317 aa23.06■■□□□ 1.28
DCTN1-216ENST00000462813 COL15A1P39059 1388 aa23.05■■□□□ 1.28
DCTN1-216ENST00000462813 PHF14O94880 888 aa23.05■■□□□ 1.28
DCTN1-216ENST00000462813 SMIM5Q71RC9 77 aa23.05■■□□□ 1.28
DCTN1-216ENST00000462813 ERBB4Q15303 1308 aa23.05■■□□□ 1.28
DCTN1-216ENST00000462813 PSDA5PKW4 1024 aaPredicted RBP23.04■■□□□ 1.28
DCTN1-216ENST00000462813 NBPF26B4DH59 902 aa23.04■■□□□ 1.28
DCTN1-216ENST00000462813 SSFA2P28290 1259 aa23.04■■□□□ 1.28
DCTN1-216ENST00000462813 NBPF10Q6P3W6 841 aaKnown RBP23.04■■□□□ 1.28
DCTN1-216ENST00000462813 NBPF15Q8N660 670 aa23.04■■□□□ 1.28
DCTN1-216ENST00000462813 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.03■■□□□ 1.28
DCTN1-216ENST00000462813 VAMP4O75379 141 aa23.02■■□□□ 1.28
DCTN1-216ENST00000462813 IL6STP40189 918 aaPredicted RBP23.02■■□□□ 1.28
DCTN1-216ENST00000462813 ZNF330Q9Y3S2 320 aaPredicted RBP23.02■■□□□ 1.28
DCTN1-216ENST00000462813 MYL6BP14649 208 aa23.01■■□□□ 1.27
DCTN1-216ENST00000462813 ADRA2BP18089 450 aa23.01■■□□□ 1.27
DCTN1-216ENST00000462813 EIF5P55010 431 aaKnown RBP23.01■■□□□ 1.27
DCTN1-216ENST00000462813 COL23A1Q86Y22 540 aaPredicted RBP23.01■■□□□ 1.27
DCTN1-216ENST00000462813 FLAD1Q8NFF5 587 aa23.01■■□□□ 1.27
DCTN1-216ENST00000462813 CHPF2Q9P2E5 772 aa23.01■■□□□ 1.27
DCTN1-216ENST00000462813 PDIA6Q15084 440 aa23■■□□□ 1.27
DCTN1-216ENST00000462813 PROSER3Q2NL68 480 aa23■■□□□ 1.27
DCTN1-216ENST00000462813 TRAPPC3LQ5T215 181 aa23■■□□□ 1.27
DCTN1-216ENST00000462813 CCDC30Q5VVM6 783 aa23■■□□□ 1.27
DCTN1-216ENST00000462813 AFDNP55196 1824 aaKnown RBP23■■□□□ 1.27
DCTN1-216ENST00000462813 MSH5O43196 834 aa22.99■■□□□ 1.27
DCTN1-216ENST00000462813 ANXA1P04083 346 aa22.99■■□□□ 1.27
DCTN1-216ENST00000462813 ARHGEF1Q92888 912 aaKnown RBP22.99■■□□□ 1.27
DCTN1-216ENST00000462813 CHMP4AQ9BY43 222 aa22.99■■□□□ 1.27
DCTN1-216ENST00000462813 PDGFDQ9GZP0 370 aaPredicted RBP22.99■■□□□ 1.27
DCTN1-216ENST00000462813 DDX21Q9NR30 783 aaKnown RBP eCLIP22.99■■□□□ 1.27
DCTN1-216ENST00000462813 DBF4Q9UBU7 674 aaPredicted RBP22.98■■□□□ 1.27
DCTN1-216ENST00000462813 RFC4P35249 363 aa22.97■■□□□ 1.27
DCTN1-216ENST00000462813 NPM2Q86SE8 214 aaKnown RBP22.97■■□□□ 1.27
DCTN1-216ENST00000462813 A0A087WZG4 1122 aa22.96■■□□□ 1.27
DCTN1-216ENST00000462813 TCERG1O14776 1098 aaKnown RBP22.96■■□□□ 1.27
DCTN1-216ENST00000462813 LRP10Q7Z4F1 713 aa22.96■■□□□ 1.27
DCTN1-216ENST00000462813 STK31Q9BXU1 1019 aa22.96■■□□□ 1.27
DCTN1-216ENST00000462813 USP42Q9H9J4 1324 aaKnown RBP22.95■■□□□ 1.26
DCTN1-216ENST00000462813 CT47B1P0C2W7 299 aaPredicted RBP22.94■■□□□ 1.26
DCTN1-216ENST00000462813 DZIP3Q86Y13 1208 aaKnown RBP22.94■■□□□ 1.26
DCTN1-216ENST00000462813 HYPKQ9NX55 129 aa22.94■■□□□ 1.26
DCTN1-216ENST00000462813 ARXQ96QS3 562 aa22.93■■□□□ 1.26
DCTN1-216ENST00000462813 SRP68Q9UHB9 627 aaKnown RBP22.93■■□□□ 1.26
DCTN1-216ENST00000462813 NARFQ9UHQ1 456 aa22.93■■□□□ 1.26
DCTN1-216ENST00000462813 TBC1D2BQ9UPU7 963 aa22.93■■□□□ 1.26
DCTN1-216ENST00000462813 N4BP2Q86UW6 1770 aaPredicted RBP22.93■■□□□ 1.26
DCTN1-216ENST00000462813 ZPR1O75312 459 aa22.92■■□□□ 1.26
DCTN1-216ENST00000462813 AIMP1Q12904 312 aaKnown RBP22.91■■□□□ 1.26
DCTN1-216ENST00000462813 USPL1Q5W0Q7 1092 aa22.91■■□□□ 1.26
DCTN1-216ENST00000462813 TTLL7Q6ZT98 887 aa22.91■■□□□ 1.26
DCTN1-216ENST00000462813 SLC16A10Q8TF71 515 aa22.91■■□□□ 1.26
DCTN1-216ENST00000462813 XAGE3Q8WTP9 111 aa22.91■■□□□ 1.26
DCTN1-216ENST00000462813 ZNF428Q96B54 188 aa22.91■■□□□ 1.26
DCTN1-216ENST00000462813 PHAXQ9H814 394 aaKnown RBP22.91■■□□□ 1.26
DCTN1-216ENST00000462813 CAMTA2O94983 1202 aa22.9■■□□□ 1.26
DCTN1-216ENST00000462813 SLC4A2P04920 1241 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms