RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 MIS18AQ9NYP9 233 aa15.86■□□□□ 0.13
HPS1-206ENST00000462743 CHL1O00533 1208 aa15.85■□□□□ 0.13
HPS1-206ENST00000462743 PHF14O94880 888 aa15.85■□□□□ 0.13
HPS1-206ENST00000462743 POLD1P28340 1107 aa15.85■□□□□ 0.13
HPS1-206ENST00000462743 EIF5P55010 431 aaKnown RBP15.85■□□□□ 0.13
HPS1-206ENST00000462743 EIF4A1P60842 406 aaKnown RBP15.85■□□□□ 0.13
HPS1-206ENST00000462743 NLGN1Q8N2Q7 840 aa15.85■□□□□ 0.13
HPS1-206ENST00000462743 ARXQ96QS3 562 aa15.85■□□□□ 0.13
HPS1-206ENST00000462743 USP16Q9Y5T5 823 aa15.85■□□□□ 0.13
HPS1-206ENST00000462743 SOS1Q07889 1333 aaPredicted RBP15.85■□□□□ 0.13
HPS1-206ENST00000462743 KDM3BQ7LBC6 1761 aa15.85■□□□□ 0.13
HPS1-206ENST00000462743 RFC4P35249 363 aa15.84■□□□□ 0.13
HPS1-206ENST00000462743 CCDC27Q2M243 656 aa15.84■□□□□ 0.13
HPS1-206ENST00000462743 ZBTB1Q9Y2K1 713 aa15.84■□□□□ 0.13
HPS1-206ENST00000462743 GIGYF1O75420 1035 aaPredicted RBP15.83■□□□□ 0.12
HPS1-206ENST00000462743 IL6STP40189 918 aaPredicted RBP15.83■□□□□ 0.12
HPS1-206ENST00000462743 PPP1R1BQ9UD71 204 aaPredicted RBP15.83■□□□□ 0.12
HPS1-206ENST00000462743 CCER2I3L3R5 266 aa15.82■□□□□ 0.12
HPS1-206ENST00000462743 ZNF853P0CG23 659 aa15.82■□□□□ 0.12
HPS1-206ENST00000462743 GYS1P13807 737 aa15.82■□□□□ 0.12
HPS1-206ENST00000462743 CFAP44Q96MT7 982 aa15.82■□□□□ 0.12
HPS1-206ENST00000462743 TSPYL4Q9UJ04 414 aa15.82■□□□□ 0.12
HPS1-206ENST00000462743 A0A087WZG4 1122 aa15.81■□□□□ 0.12
HPS1-206ENST00000462743 A1BGP04217 495 aa15.81■□□□□ 0.12
HPS1-206ENST00000462743 CALD1Q05682 793 aaKnown RBP15.81■□□□□ 0.12
HPS1-206ENST00000462743 NGEFQ8N5V2 710 aa15.81■□□□□ 0.12
HPS1-206ENST00000462743 NARFQ9UHQ1 456 aa15.81■□□□□ 0.12
HPS1-206ENST00000462743 USP42Q9H9J4 1324 aaKnown RBP15.8■□□□□ 0.12
HPS1-206ENST00000462743 PRAMEF22A3QJZ6 481 aa15.8■□□□□ 0.12
HPS1-206ENST00000462743 CANXP27824 592 aaKnown RBP15.8■□□□□ 0.12
HPS1-206ENST00000462743 SYT17Q9BSW7 474 aa15.8■□□□□ 0.12
HPS1-206ENST00000462743 MSL1Q68DK7 614 aa15.79■□□□□ 0.12
HPS1-206ENST00000462743 COL15A1P39059 1388 aa15.78■□□□□ 0.12
HPS1-206ENST00000462743 C4AP0C0L4 1744 aa15.78■□□□□ 0.12
HPS1-206ENST00000462743 ZPR1O75312 459 aa15.78■□□□□ 0.12
HPS1-206ENST00000462743 TM4SF1P30408 202 aa15.78■□□□□ 0.12
HPS1-206ENST00000462743 FHDC1Q9C0D6 1143 aaPredicted RBP15.78■□□□□ 0.12
HPS1-206ENST00000462743 IFT57Q9NWB7 429 aa15.78■□□□□ 0.12
HPS1-206ENST00000462743 SRP68Q9UHB9 627 aaKnown RBP15.78■□□□□ 0.12
HPS1-206ENST00000462743 ERBB4Q15303 1308 aa15.77■□□□□ 0.12
HPS1-206ENST00000462743 NBPF26B4DH59 902 aa15.77■□□□□ 0.12
HPS1-206ENST00000462743 RGL2O15211 777 aa15.77■□□□□ 0.12
HPS1-206ENST00000462743 GNAI1P63096 354 aa15.77■□□□□ 0.12
HPS1-206ENST00000462743 NBPF10Q6P3W6 841 aaKnown RBP15.77■□□□□ 0.12
HPS1-206ENST00000462743 WWC1Q8IX03 1113 aa15.77■□□□□ 0.12
HPS1-206ENST00000462743 NBPF15Q8N660 670 aa15.77■□□□□ 0.12
HPS1-206ENST00000462743 BCL2L12Q9HB09 334 aa15.77■□□□□ 0.12
HPS1-206ENST00000462743 CD2APQ9Y5K6 639 aa15.77■□□□□ 0.12
HPS1-206ENST00000462743 IL16Q14005 1332 aa15.76■□□□□ 0.11
HPS1-206ENST00000462743 FKBP8Q14318 412 aa15.76■□□□□ 0.11
HPS1-206ENST00000462743 FAM9BQ8IZU0 186 aa15.76■□□□□ 0.11
HPS1-206ENST00000462743 SRCAPQ6ZRS2 3230 aa15.75■□□□□ 0.11
HPS1-206ENST00000462743 MMP10P09238 476 aa15.75■□□□□ 0.11
HPS1-206ENST00000462743 HOXB7P09629 217 aa15.75■□□□□ 0.11
HPS1-206ENST00000462743 USPL1Q5W0Q7 1092 aa15.75■□□□□ 0.11
HPS1-206ENST00000462743 DIEXFQ68CQ4 756 aaKnown RBP15.75■□□□□ 0.11
HPS1-206ENST00000462743 CLEC4GQ6UXB4 293 aa15.74■□□□□ 0.11
HPS1-206ENST00000462743 NPM2Q86SE8 214 aaKnown RBP15.74■□□□□ 0.11
HPS1-206ENST00000462743 WDR63Q8IWG1 891 aa15.74■□□□□ 0.11
HPS1-206ENST00000462743 MBIPQ9NS73 344 aa15.74■□□□□ 0.11
HPS1-206ENST00000462743 LAS1LQ9Y4W2 734 aaKnown RBP15.74■□□□□ 0.11
HPS1-206ENST00000462743 LAMB4A4D0S4 1761 aa15.74■□□□□ 0.11
HPS1-206ENST00000462743 CAMTA2O94983 1202 aa15.73■□□□□ 0.11
HPS1-206ENST00000462743 TBC1D2BQ9UPU7 963 aa15.73■□□□□ 0.11
HPS1-206ENST00000462743 PARP3Q9Y6F1 533 aa15.73■□□□□ 0.11
HPS1-206ENST00000462743 PDIA6Q15084 440 aa15.72■□□□□ 0.11
HPS1-206ENST00000462743 DZIP3Q86Y13 1208 aaKnown RBP15.72■□□□□ 0.11
HPS1-206ENST00000462743 POLRMTO00411 1230 aaKnown RBP15.71■□□□□ 0.11
HPS1-206ENST00000462743 DDR1Q08345 913 aa15.71■□□□□ 0.11
HPS1-206ENST00000462743 NFIXQ14938 502 aa15.71■□□□□ 0.11
HPS1-206ENST00000462743 LRP10Q7Z4F1 713 aa15.71■□□□□ 0.11
HPS1-206ENST00000462743 ERVV-1B6SEH8 477 aa15.7■□□□□ 0.1
HPS1-206ENST00000462743 PIP4K2AP48426 406 aaPredicted RBP15.7■□□□□ 0.1
HPS1-206ENST00000462743 KRT24Q2M2I5 525 aa15.7■□□□□ 0.1
HPS1-206ENST00000462743 CHMP4AQ9BY43 222 aa15.7■□□□□ 0.1
HPS1-206ENST00000462743 KIF13BQ9NQT8 1826 aa15.69■□□□□ 0.1
HPS1-206ENST00000462743 EIF2S2P20042 333 aaKnown RBP15.69■□□□□ 0.1
HPS1-206ENST00000462743 TGFB2P61812 414 aa15.69■□□□□ 0.1
HPS1-206ENST00000462743 DUSP27Q5VZP5 1158 aa15.69■□□□□ 0.1
HPS1-206ENST00000462743 DDX21Q9NR30 783 aaKnown RBP eCLIP15.69■□□□□ 0.1
HPS1-206ENST00000462743 ZNF330Q9Y3S2 320 aaPredicted RBP15.69■□□□□ 0.1
HPS1-206ENST00000462743 MIER1Q8N108 512 aa15.68■□□□□ 0.1
HPS1-206ENST00000462743 SERPINB2P05120 415 aa15.67■□□□□ 0.1
HPS1-206ENST00000462743 TBC1D9BQ66K14 1250 aa15.67■□□□□ 0.1
HPS1-206ENST00000462743 NLGN2Q8NFZ4 835 aa15.67■□□□□ 0.1
HPS1-206ENST00000462743 ZNF652Q9Y2D9 606 aa15.67■□□□□ 0.1
HPS1-206ENST00000462743 MAP3K15Q6ZN16 1313 aa15.67■□□□□ 0.1
HPS1-206ENST00000462743 ZNF521Q96K83 1311 aa15.67■□□□□ 0.1
HPS1-206ENST00000462743 AFDNP55196 1824 aaKnown RBP15.66■□□□□ 0.1
HPS1-206ENST00000462743 NRXN2Q9P2S2 1712 aa15.66■□□□□ 0.1
HPS1-206ENST00000462743 DCAF8L1A6NGE4 600 aa15.66■□□□□ 0.1
HPS1-206ENST00000462743 MYL6BP14649 208 aa15.66■□□□□ 0.1
HPS1-206ENST00000462743 TTLL7Q6ZT98 887 aa15.66■□□□□ 0.1
HPS1-206ENST00000462743 C8orf58Q8NAV2 365 aa15.66■□□□□ 0.1
HPS1-206ENST00000462743 SETDB2Q96T68 719 aa15.66■□□□□ 0.1
HPS1-206ENST00000462743 C10orf71Q711Q0 1435 aa15.66■□□□□ 0.1
HPS1-206ENST00000462743 SCN7AQ01118 1682 aa15.66■□□□□ 0.1
HPS1-206ENST00000462743 BCORQ6W2J9 1755 aa15.65■□□□□ 0.1
HPS1-206ENST00000462743 HDGFL1Q5TGJ6 251 aa15.65■□□□□ 0.1
HPS1-206ENST00000462743 KLHL34Q8N239 644 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms