RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 ZBTB1Q9Y2K1 713 aa24.41■■□□□ 1.5
CDKN1A-206ENST00000462537 CANXP27824 592 aaKnown RBP24.4■■□□□ 1.5
CDKN1A-206ENST00000462537 NEUROD2Q15784 382 aa24.4■■□□□ 1.5
CDKN1A-206ENST00000462537 MIS18AQ9NYP9 233 aa24.4■■□□□ 1.5
CDKN1A-206ENST00000462537 RRP7AQ9Y3A4 280 aaKnown RBP24.4■■□□□ 1.5
CDKN1A-206ENST00000462537 SOS1Q07889 1333 aaPredicted RBP24.39■■□□□ 1.5
CDKN1A-206ENST00000462537 TMPOP42166 694 aaKnown RBP24.39■■□□□ 1.49
CDKN1A-206ENST00000462537 NLGN1Q8N2Q7 840 aa24.39■■□□□ 1.49
CDKN1A-206ENST00000462537 COL15A1P39059 1388 aa24.39■■□□□ 1.49
CDKN1A-206ENST00000462537 KDM3BQ7LBC6 1761 aa24.39■■□□□ 1.49
CDKN1A-206ENST00000462537 GYS1P13807 737 aa24.38■■□□□ 1.49
CDKN1A-206ENST00000462537 LMOD3Q0VAK6 560 aa24.38■■□□□ 1.49
CDKN1A-206ENST00000462537 PNISRQ8TF01 805 aaKnown RBP24.38■■□□□ 1.49
CDKN1A-206ENST00000462537 SRP68Q9UHB9 627 aaKnown RBP24.38■■□□□ 1.49
CDKN1A-206ENST00000462537 MMP10P09238 476 aa24.37■■□□□ 1.49
CDKN1A-206ENST00000462537 USP42Q9H9J4 1324 aaKnown RBP24.36■■□□□ 1.49
CDKN1A-206ENST00000462537 ZPR1O75312 459 aa24.36■■□□□ 1.49
CDKN1A-206ENST00000462537 SNRPA1P09661 255 aaKnown RBP24.36■■□□□ 1.49
CDKN1A-206ENST00000462537 ZNF330Q9Y3S2 320 aaPredicted RBP24.36■■□□□ 1.49
CDKN1A-206ENST00000462537 NLGN2Q8NFZ4 835 aa24.35■■□□□ 1.49
CDKN1A-206ENST00000462537 PRAMEF22A3QJZ6 481 aa24.33■■□□□ 1.49
CDKN1A-206ENST00000462537 A1BGP04217 495 aa24.33■■□□□ 1.49
CDKN1A-206ENST00000462537 CCDC184Q52MB2 194 aa24.33■■□□□ 1.49
CDKN1A-206ENST00000462537 CD2APQ9Y5K6 639 aa24.33■■□□□ 1.49
CDKN1A-206ENST00000462537 USP16Q9Y5T5 823 aa24.33■■□□□ 1.49
CDKN1A-206ENST00000462537 FKBP8Q14318 412 aa24.32■■□□□ 1.48
CDKN1A-206ENST00000462537 USPL1Q5W0Q7 1092 aa24.32■■□□□ 1.48
CDKN1A-206ENST00000462537 NPM2Q86SE8 214 aaKnown RBP24.32■■□□□ 1.48
CDKN1A-206ENST00000462537 PELP1Q8IZL8 1130 aaKnown RBP24.32■■□□□ 1.48
CDKN1A-206ENST00000462537 PARP3Q9Y6F1 533 aa24.32■■□□□ 1.48
CDKN1A-206ENST00000462537 LAMB4A4D0S4 1761 aa24.31■■□□□ 1.48
CDKN1A-206ENST00000462537 A0A087WZG4 1122 aa24.31■■□□□ 1.48
CDKN1A-206ENST00000462537 NARFQ9UHQ1 456 aa24.31■■□□□ 1.48
CDKN1A-206ENST00000462537 TSPYL4Q9UJ04 414 aa24.31■■□□□ 1.48
CDKN1A-206ENST00000462537 EIF5P55010 431 aaKnown RBP24.3■■□□□ 1.48
CDKN1A-206ENST00000462537 MRS2Q9HD23 443 aa24.3■■□□□ 1.48
CDKN1A-206ENST00000462537 IL6STP40189 918 aaPredicted RBP24.29■■□□□ 1.48
CDKN1A-206ENST00000462537 GPR162Q16538 588 aa24.29■■□□□ 1.48
CDKN1A-206ENST00000462537 PIP4K2AP48426 406 aaPredicted RBP24.28■■□□□ 1.48
CDKN1A-206ENST00000462537 EIF4A1P60842 406 aaKnown RBP24.28■■□□□ 1.48
CDKN1A-206ENST00000462537 TRIM35Q9UPQ4 493 aa24.27■■□□□ 1.48
CDKN1A-206ENST00000462537 APAF1O14727 1248 aa24.26■■□□□ 1.47
CDKN1A-206ENST00000462537 LAS1LQ9Y4W2 734 aaKnown RBP24.26■■□□□ 1.47
CDKN1A-206ENST00000462537 SCN7AQ01118 1682 aa24.26■■□□□ 1.47
CDKN1A-206ENST00000462537 TBC1D2BQ9UPU7 963 aa24.25■■□□□ 1.47
CDKN1A-206ENST00000462537 KIF13BQ9NQT8 1826 aa24.24■■□□□ 1.47
CDKN1A-206ENST00000462537 GIGYF1O75420 1035 aaPredicted RBP24.24■■□□□ 1.47
CDKN1A-206ENST00000462537 DDR1Q08345 913 aa24.24■■□□□ 1.47
CDKN1A-206ENST00000462537 BABAM1Q9NWV8 329 aa24.24■■□□□ 1.47
CDKN1A-206ENST00000462537 BCL2L12Q9HB09 334 aa24.23■■□□□ 1.47
CDKN1A-206ENST00000462537 C10orf71Q711Q0 1435 aa24.23■■□□□ 1.47
CDKN1A-206ENST00000462537 TM4SF1P30408 202 aa24.22■■□□□ 1.47
CDKN1A-206ENST00000462537 DZIP3Q86Y13 1208 aaKnown RBP24.22■■□□□ 1.47
CDKN1A-206ENST00000462537 BCORQ6W2J9 1755 aa24.21■■□□□ 1.47
CDKN1A-206ENST00000462537 POLRMTO00411 1230 aaKnown RBP24.21■■□□□ 1.47
CDKN1A-206ENST00000462537 NFIXQ14938 502 aa24.21■■□□□ 1.47
CDKN1A-206ENST00000462537 BICDL1Q6ZP65 573 aa24.21■■□□□ 1.47
CDKN1A-206ENST00000462537 N4BP2Q86UW6 1770 aaPredicted RBP24.21■■□□□ 1.47
CDKN1A-206ENST00000462537 NBPF26B4DH59 902 aa24.2■■□□□ 1.46
CDKN1A-206ENST00000462537 NBPF10Q6P3W6 841 aaKnown RBP24.2■■□□□ 1.46
CDKN1A-206ENST00000462537 NBPF15Q8N660 670 aa24.2■■□□□ 1.46
CDKN1A-206ENST00000462537 AFDNP55196 1824 aaKnown RBP24.19■■□□□ 1.46
CDKN1A-206ENST00000462537 WWC3Q9ULE0 1092 aa24.19■■□□□ 1.46
CDKN1A-206ENST00000462537 CHL1O00533 1208 aa24.18■■□□□ 1.46
CDKN1A-206ENST00000462537 CAMTA2O94983 1202 aa24.18■■□□□ 1.46
CDKN1A-206ENST00000462537 KIAA1551Q9HCM1 1747 aa24.18■■□□□ 1.46
CDKN1A-206ENST00000462537 YBX3P16989 372 aaKnown RBP eCLIP24.17■■□□□ 1.46
CDKN1A-206ENST00000462537 TGFB2P61812 414 aa24.17■■□□□ 1.46
CDKN1A-206ENST00000462537 TBC1D9BQ66K14 1250 aa24.17■■□□□ 1.46
CDKN1A-206ENST00000462537 PXDNLA1KZ92 1463 aa24.17■■□□□ 1.46
CDKN1A-206ENST00000462537 SENP3-EIF4A1A0A087X0R7 540 aa24.16■■□□□ 1.46
CDKN1A-206ENST00000462537 SERPINB2P05120 415 aa24.16■■□□□ 1.46
CDKN1A-206ENST00000462537 EIF2S2P20042 333 aaKnown RBP24.16■■□□□ 1.46
CDKN1A-206ENST00000462537 YY1P25490 414 aa24.16■■□□□ 1.46
CDKN1A-206ENST00000462537 CALD1Q05682 793 aaKnown RBP24.16■■□□□ 1.46
CDKN1A-206ENST00000462537 NGEFQ8N5V2 710 aa24.16■■□□□ 1.46
CDKN1A-206ENST00000462537 NRXN2Q9P2S2 1712 aa24.15■■□□□ 1.46
CDKN1A-206ENST00000462537 A0A0G2JLW4 131 aa24.15■■□□□ 1.46
CDKN1A-206ENST00000462537 MYL6BP14649 208 aa24.15■■□□□ 1.46
CDKN1A-206ENST00000462537 CHD4Q14839 1912 aa24.14■■□□□ 1.46
CDKN1A-206ENST00000462537 CFAP44Q96MT7 982 aa24.14■■□□□ 1.45
CDKN1A-206ENST00000462537 ZNF652Q9Y2D9 606 aa24.14■■□□□ 1.45
CDKN1A-206ENST00000462537 GRIN3BO60391 1043 aa24.13■■□□□ 1.45
CDKN1A-206ENST00000462537 DPEP1P16444 411 aa24.13■■□□□ 1.45
CDKN1A-206ENST00000462537 CARMIL3Q8ND23 1372 aa24.13■■□□□ 1.45
CDKN1A-206ENST00000462537 KRT24Q2M2I5 525 aa24.12■■□□□ 1.45
CDKN1A-206ENST00000462537 FAM9BQ8IZU0 186 aa24.12■■□□□ 1.45
CDKN1A-206ENST00000462537 NECTIN2Q92692 538 aa24.12■■□□□ 1.45
CDKN1A-206ENST00000462537 SETDB2Q96T68 719 aa24.12■■□□□ 1.45
CDKN1A-206ENST00000462537 ERBB4Q15303 1308 aa24.11■■□□□ 1.45
CDKN1A-206ENST00000462537 NPHP1O15259 732 aa24.11■■□□□ 1.45
CDKN1A-206ENST00000462537 GNAI1P63096 354 aa24.11■■□□□ 1.45
CDKN1A-206ENST00000462537 MBIPQ9NS73 344 aa24.11■■□□□ 1.45
CDKN1A-206ENST00000462537 IFT57Q9NWB7 429 aa24.11■■□□□ 1.45
CDKN1A-206ENST00000462537 CLEC4GQ6UXB4 293 aa24.1■■□□□ 1.45
CDKN1A-206ENST00000462537 KIF6Q6ZMV9 814 aa24.1■■□□□ 1.45
CDKN1A-206ENST00000462537 GOLGB1Q14789 3259 aaKnown RBP24.1■■□□□ 1.45
CDKN1A-206ENST00000462537 UTRNP46939 3433 aa24.09■■□□□ 1.45
CDKN1A-206ENST00000462537 ZNF853P0CG23 659 aa24.08■■□□□ 1.45
CDKN1A-206ENST00000462537 CHRNA5P30532 468 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms