RNA–Protein interactions for RNA: ENST00000462202.2

TRIM8-202, Transcript of tripartite motif containing 8, humanhuman

TSL 5

Gene TRIM8, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-202ENST00000462202 UBR2Q8IWV8 1755 aa28.48■■■□□ 2.15
TRIM8-202ENST00000462202 LMOD3Q0VAK6 560 aa28.48■■■□□ 2.15
TRIM8-202ENST00000462202 CICQ96RK0 1608 aaPredicted RBP28.47■■■□□ 2.15
TRIM8-202ENST00000462202 PNISRQ8TF01 805 aaKnown RBP28.47■■■□□ 2.15
TRIM8-202ENST00000462202 SRP68Q9UHB9 627 aaKnown RBP28.47■■■□□ 2.15
TRIM8-202ENST00000462202 ZNF330Q9Y3S2 320 aaPredicted RBP28.47■■■□□ 2.15
TRIM8-202ENST00000462202 MYH14Q7Z406 1995 aaKnown RBP28.47■■■□□ 2.15
TRIM8-202ENST00000462202 DLG5Q8TDM6 1919 aa28.47■■■□□ 2.15
TRIM8-202ENST00000462202 CCDC184Q52MB2 194 aa28.46■■■□□ 2.15
TRIM8-202ENST00000462202 SOS1Q07889 1333 aaPredicted RBP28.45■■■□□ 2.15
TRIM8-202ENST00000462202 NLGN1Q8N2Q7 840 aa28.45■■■□□ 2.14
TRIM8-202ENST00000462202 ZPR1O75312 459 aa28.44■■■□□ 2.14
TRIM8-202ENST00000462202 MMP10P09238 476 aa28.44■■■□□ 2.14
TRIM8-202ENST00000462202 NPM2Q86SE8 214 aaKnown RBP28.44■■■□□ 2.14
TRIM8-202ENST00000462202 MRS2Q9HD23 443 aa28.44■■■□□ 2.14
TRIM8-202ENST00000462202 SNRPA1P09661 255 aaKnown RBP28.43■■■□□ 2.14
TRIM8-202ENST00000462202 GYS1P13807 737 aa28.43■■■□□ 2.14
TRIM8-202ENST00000462202 COL24A1Q17RW2 1714 aa28.43■■■□□ 2.14
TRIM8-202ENST00000462202 COL15A1P39059 1388 aa28.42■■■□□ 2.14
TRIM8-202ENST00000462202 USP42Q9H9J4 1324 aaKnown RBP28.42■■■□□ 2.14
TRIM8-202ENST00000462202 PRAMEF22A3QJZ6 481 aa28.41■■■□□ 2.14
TRIM8-202ENST00000462202 A1BGP04217 495 aa28.41■■■□□ 2.14
TRIM8-202ENST00000462202 TSPYL4Q9UJ04 414 aa28.41■■■□□ 2.14
TRIM8-202ENST00000462202 USPL1Q5W0Q7 1092 aa28.4■■■□□ 2.14
TRIM8-202ENST00000462202 PELP1Q8IZL8 1130 aaKnown RBP28.4■■■□□ 2.14
TRIM8-202ENST00000462202 USP16Q9Y5T5 823 aa28.4■■■□□ 2.14
TRIM8-202ENST00000462202 NLGN2Q8NFZ4 835 aa28.39■■■□□ 2.14
TRIM8-202ENST00000462202 FKBP8Q14318 412 aa28.38■■■□□ 2.13
TRIM8-202ENST00000462202 LAS1LQ9Y4W2 734 aaKnown RBP28.38■■■□□ 2.13
TRIM8-202ENST00000462202 PARP3Q9Y6F1 533 aa28.38■■■□□ 2.13
TRIM8-202ENST00000462202 C4AP0C0L4 1744 aa28.38■■■□□ 2.13
TRIM8-202ENST00000462202 A0A087WZG4 1122 aa28.37■■■□□ 2.13
TRIM8-202ENST00000462202 APAF1O14727 1248 aa28.37■■■□□ 2.13
TRIM8-202ENST00000462202 PIP4K2AP48426 406 aaPredicted RBP28.37■■■□□ 2.13
TRIM8-202ENST00000462202 NARFQ9UHQ1 456 aa28.36■■■□□ 2.13
TRIM8-202ENST00000462202 EIF5P55010 431 aaKnown RBP28.35■■■□□ 2.13
TRIM8-202ENST00000462202 CD2APQ9Y5K6 639 aa28.35■■■□□ 2.13
TRIM8-202ENST00000462202 IL6STP40189 918 aaPredicted RBP28.34■■■□□ 2.13
TRIM8-202ENST00000462202 EIF4A1P60842 406 aaKnown RBP28.34■■■□□ 2.13
TRIM8-202ENST00000462202 GPR162Q16538 588 aa28.34■■■□□ 2.13
TRIM8-202ENST00000462202 TRIM35Q9UPQ4 493 aa28.34■■■□□ 2.13
TRIM8-202ENST00000462202 TBC1D2BQ9UPU7 963 aa28.33■■■□□ 2.13
TRIM8-202ENST00000462202 SENP3-EIF4A1A0A087X0R7 540 aa28.32■■■□□ 2.12
TRIM8-202ENST00000462202 GIGYF1O75420 1035 aaPredicted RBP28.3■■■□□ 2.12
TRIM8-202ENST00000462202 KDM3BQ7LBC6 1761 aa28.29■■■□□ 2.12
TRIM8-202ENST00000462202 BICDL1Q6ZP65 573 aa28.29■■■□□ 2.12
TRIM8-202ENST00000462202 DDR1Q08345 913 aa28.28■■■□□ 2.12
TRIM8-202ENST00000462202 DZIP3Q86Y13 1208 aaKnown RBP28.28■■■□□ 2.12
TRIM8-202ENST00000462202 BABAM1Q9NWV8 329 aa28.28■■■□□ 2.12
TRIM8-202ENST00000462202 WWC3Q9ULE0 1092 aa28.28■■■□□ 2.12
TRIM8-202ENST00000462202 NGEFQ8N5V2 710 aa28.26■■■□□ 2.11
TRIM8-202ENST00000462202 BCL2L12Q9HB09 334 aa28.26■■■□□ 2.11
TRIM8-202ENST00000462202 NBPF26B4DH59 902 aa28.25■■■□□ 2.11
TRIM8-202ENST00000462202 NFIXQ14938 502 aa28.25■■■□□ 2.11
TRIM8-202ENST00000462202 NBPF10Q6P3W6 841 aaKnown RBP28.25■■■□□ 2.11
TRIM8-202ENST00000462202 NBPF15Q8N660 670 aa28.25■■■□□ 2.11
TRIM8-202ENST00000462202 EIF2S2P20042 333 aaKnown RBP28.24■■■□□ 2.11
TRIM8-202ENST00000462202 TM4SF1P30408 202 aa28.24■■■□□ 2.11
TRIM8-202ENST00000462202 POLRMTO00411 1230 aaKnown RBP28.23■■■□□ 2.11
TRIM8-202ENST00000462202 CHL1O00533 1208 aa28.23■■■□□ 2.11
TRIM8-202ENST00000462202 MYL6BP14649 208 aa28.23■■■□□ 2.11
TRIM8-202ENST00000462202 CALD1Q05682 793 aaKnown RBP28.23■■■□□ 2.11
TRIM8-202ENST00000462202 FAM9BQ8IZU0 186 aa28.23■■■□□ 2.11
TRIM8-202ENST00000462202 CAMTA2O94983 1202 aa28.21■■■□□ 2.11
TRIM8-202ENST00000462202 TBC1D9BQ66K14 1250 aa28.21■■■□□ 2.11
TRIM8-202ENST00000462202 NECTIN2Q92692 538 aa28.21■■■□□ 2.11
TRIM8-202ENST00000462202 C10orf71Q711Q0 1435 aa28.2■■■□□ 2.11
TRIM8-202ENST00000462202 CFAP44Q96MT7 982 aa28.2■■■□□ 2.1
TRIM8-202ENST00000462202 LAMB4A4D0S4 1761 aa28.19■■■□□ 2.1
TRIM8-202ENST00000462202 NPHP1O15259 732 aa28.19■■■□□ 2.1
TRIM8-202ENST00000462202 SERPINB2P05120 415 aa28.19■■■□□ 2.1
TRIM8-202ENST00000462202 A0A0G2JLW4 131 aa28.18■■■□□ 2.1
TRIM8-202ENST00000462202 KRT24Q2M2I5 525 aa28.18■■■□□ 2.1
TRIM8-202ENST00000462202 ZNF652Q9Y2D9 606 aa28.18■■■□□ 2.1
TRIM8-202ENST00000462202 SALL2Q9Y467 1007 aaPredicted RBP28.18■■■□□ 2.1
TRIM8-202ENST00000462202 YBX3P16989 372 aaKnown RBP eCLIP28.17■■■□□ 2.1
TRIM8-202ENST00000462202 TGFB2P61812 414 aa28.17■■■□□ 2.1
TRIM8-202ENST00000462202 SETDB2Q96T68 719 aa28.17■■■□□ 2.1
TRIM8-202ENST00000462202 GNAI1P63096 354 aa28.16■■■□□ 2.1
TRIM8-202ENST00000462202 KIF6Q6ZMV9 814 aa28.16■■■□□ 2.1
TRIM8-202ENST00000462202 MBIPQ9NS73 344 aa28.16■■■□□ 2.1
TRIM8-202ENST00000462202 IFT57Q9NWB7 429 aa28.16■■■□□ 2.1
TRIM8-202ENST00000462202 SCN7AQ01118 1682 aa28.16■■■□□ 2.1
TRIM8-202ENST00000462202 DPEP1P16444 411 aa28.15■■■□□ 2.1
TRIM8-202ENST00000462202 YY1P25490 414 aa28.15■■■□□ 2.1
TRIM8-202ENST00000462202 PXDNLA1KZ92 1463 aa28.15■■■□□ 2.1
TRIM8-202ENST00000462202 GRIN3BO60391 1043 aa28.14■■■□□ 2.1
TRIM8-202ENST00000462202 CARMIL3Q8ND23 1372 aa28.13■■■□□ 2.09
TRIM8-202ENST00000462202 ERBB4Q15303 1308 aa28.13■■■□□ 2.09
TRIM8-202ENST00000462202 ANXA1P04083 346 aa28.12■■■□□ 2.09
TRIM8-202ENST00000462202 CLEC4GQ6UXB4 293 aa28.11■■■□□ 2.09
TRIM8-202ENST00000462202 TTLL7Q6ZT98 887 aa28.11■■■□□ 2.09
TRIM8-202ENST00000462202 BCS1LQ9Y276 419 aa28.11■■■□□ 2.09
TRIM8-202ENST00000462202 GOLGB1Q14789 3259 aaKnown RBP28.1■■■□□ 2.09
TRIM8-202ENST00000462202 ZNF853P0CG23 659 aa28.1■■■□□ 2.09
TRIM8-202ENST00000462202 CHRNA5P30532 468 aa28.1■■■□□ 2.09
TRIM8-202ENST00000462202 HDGFL1Q5TGJ6 251 aa28.1■■■□□ 2.09
TRIM8-202ENST00000462202 CCDC24Q8N4L8 307 aa28.1■■■□□ 2.09
TRIM8-202ENST00000462202 ZBTB3Q9H5J0 574 aa28.1■■■□□ 2.09
TRIM8-202ENST00000462202 NIP7Q9Y221 180 aaKnown RBP eCLIP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms