RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 EIF5P55010 431 aaKnown RBP13.4□□□□□ -0.26
SPTAN1-204ENST00000461855 LMOD3Q0VAK6 560 aa13.4□□□□□ -0.26
SPTAN1-204ENST00000461855 CCDC146Q8IYE0 955 aa13.4□□□□□ -0.26
SPTAN1-204ENST00000461855 NLGN1Q8N2Q7 840 aa13.4□□□□□ -0.26
SPTAN1-204ENST00000461855 THUMPD2Q9BTF0 503 aaKnown RBP13.4□□□□□ -0.26
SPTAN1-204ENST00000461855 ZBTB1Q9Y2K1 713 aa13.4□□□□□ -0.26
SPTAN1-204ENST00000461855 USP42Q9H9J4 1324 aaKnown RBP13.39□□□□□ -0.27
SPTAN1-204ENST00000461855 SNRPA1P09661 255 aaKnown RBP13.39□□□□□ -0.27
SPTAN1-204ENST00000461855 RFC4P35249 363 aa13.39□□□□□ -0.27
SPTAN1-204ENST00000461855 MSL1Q68DK7 614 aa13.39□□□□□ -0.27
SPTAN1-204ENST00000461855 USP16Q9Y5T5 823 aa13.39□□□□□ -0.27
SPTAN1-204ENST00000461855 IL6STP40189 918 aaPredicted RBP13.38□□□□□ -0.27
SPTAN1-204ENST00000461855 EIF4A1P60842 406 aaKnown RBP13.38□□□□□ -0.27
SPTAN1-204ENST00000461855 MIS18AQ9NYP9 233 aa13.38□□□□□ -0.27
SPTAN1-204ENST00000461855 NARFQ9UHQ1 456 aa13.38□□□□□ -0.27
SPTAN1-204ENST00000461855 PRAMEF22A3QJZ6 481 aa13.37□□□□□ -0.27
SPTAN1-204ENST00000461855 CHL1O00533 1208 aa13.37□□□□□ -0.27
SPTAN1-204ENST00000461855 GIGYF1O75420 1035 aaPredicted RBP13.37□□□□□ -0.27
SPTAN1-204ENST00000461855 NCBP3Q53F19 620 aaKnown RBP13.37□□□□□ -0.27
SPTAN1-204ENST00000461855 RRP7AQ9Y3A4 280 aaKnown RBP13.37□□□□□ -0.27
SPTAN1-204ENST00000461855 CD2APQ9Y5K6 639 aa13.37□□□□□ -0.27
SPTAN1-204ENST00000461855 KDM3BQ7LBC6 1761 aa13.37□□□□□ -0.27
SPTAN1-204ENST00000461855 C4AP0C0L4 1744 aa13.36□□□□□ -0.27
SPTAN1-204ENST00000461855 COL15A1P39059 1388 aa13.36□□□□□ -0.27
SPTAN1-204ENST00000461855 A1BGP04217 495 aa13.36□□□□□ -0.27
SPTAN1-204ENST00000461855 TM4SF1P30408 202 aa13.36□□□□□ -0.27
SPTAN1-204ENST00000461855 BCL2L12Q9HB09 334 aa13.36□□□□□ -0.27
SPTAN1-204ENST00000461855 SRP68Q9UHB9 627 aaKnown RBP13.36□□□□□ -0.27
SPTAN1-204ENST00000461855 APAF1O14727 1248 aa13.35□□□□□ -0.27
SPTAN1-204ENST00000461855 MMP10P09238 476 aa13.35□□□□□ -0.27
SPTAN1-204ENST00000461855 CANXP27824 592 aaKnown RBP13.35□□□□□ -0.27
SPTAN1-204ENST00000461855 FKBP8Q14318 412 aa13.35□□□□□ -0.27
SPTAN1-204ENST00000461855 A0A087WZG4 1122 aa13.34□□□□□ -0.27
SPTAN1-204ENST00000461855 NBPF26B4DH59 902 aa13.34□□□□□ -0.27
SPTAN1-204ENST00000461855 ZNF853P0CG23 659 aa13.34□□□□□ -0.27
SPTAN1-204ENST00000461855 NEUROD2Q15784 382 aa13.34□□□□□ -0.27
SPTAN1-204ENST00000461855 USPL1Q5W0Q7 1092 aa13.34□□□□□ -0.27
SPTAN1-204ENST00000461855 NBPF10Q6P3W6 841 aaKnown RBP13.34□□□□□ -0.27
SPTAN1-204ENST00000461855 NBPF15Q8N660 670 aa13.34□□□□□ -0.27
SPTAN1-204ENST00000461855 MRS2Q9HD23 443 aa13.34□□□□□ -0.27
SPTAN1-204ENST00000461855 RGL2O15211 777 aa13.33□□□□□ -0.28
SPTAN1-204ENST00000461855 ZPR1O75312 459 aa13.33□□□□□ -0.28
SPTAN1-204ENST00000461855 CCDC27Q2M243 656 aa13.33□□□□□ -0.28
SPTAN1-204ENST00000461855 CFAP44Q96MT7 982 aa13.33□□□□□ -0.28
SPTAN1-204ENST00000461855 TSPYL4Q9UJ04 414 aa13.33□□□□□ -0.28
SPTAN1-204ENST00000461855 DDR1Q08345 913 aa13.32□□□□□ -0.28
SPTAN1-204ENST00000461855 NLGN2Q8NFZ4 835 aa13.32□□□□□ -0.28
SPTAN1-204ENST00000461855 UTRNP46939 3433 aa13.32□□□□□ -0.28
SPTAN1-204ENST00000461855 POLRMTO00411 1230 aaKnown RBP13.31□□□□□ -0.28
SPTAN1-204ENST00000461855 CAMTA2O94983 1202 aa13.31□□□□□ -0.28
SPTAN1-204ENST00000461855 LRP10Q7Z4F1 713 aa13.31□□□□□ -0.28
SPTAN1-204ENST00000461855 ERBB4Q15303 1308 aa13.31□□□□□ -0.28
SPTAN1-204ENST00000461855 C10orf71Q711Q0 1435 aa13.3□□□□□ -0.28
SPTAN1-204ENST00000461855 NFIXQ14938 502 aa13.3□□□□□ -0.28
SPTAN1-204ENST00000461855 PDIA6Q15084 440 aa13.3□□□□□ -0.28
SPTAN1-204ENST00000461855 TBC1D2BQ9UPU7 963 aa13.3□□□□□ -0.28
SPTAN1-204ENST00000461855 KIF13BQ9NQT8 1826 aa13.29□□□□□ -0.28
SPTAN1-204ENST00000461855 HOXB7P09629 217 aa13.29□□□□□ -0.28
SPTAN1-204ENST00000461855 TGFB2P61812 414 aa13.29□□□□□ -0.28
SPTAN1-204ENST00000461855 CLEC4GQ6UXB4 293 aa13.29□□□□□ -0.28
SPTAN1-204ENST00000461855 IFT57Q9NWB7 429 aa13.29□□□□□ -0.28
SPTAN1-204ENST00000461855 PARP3Q9Y6F1 533 aa13.29□□□□□ -0.28
SPTAN1-204ENST00000461855 LAMB4A4D0S4 1761 aa13.29□□□□□ -0.28
SPTAN1-204ENST00000461855 GOLGB1Q14789 3259 aaKnown RBP13.28□□□□□ -0.28
SPTAN1-204ENST00000461855 PIP4K2AP48426 406 aaPredicted RBP13.28□□□□□ -0.28
SPTAN1-204ENST00000461855 CALD1Q05682 793 aaKnown RBP13.28□□□□□ -0.28
SPTAN1-204ENST00000461855 DZIP3Q86Y13 1208 aaKnown RBP13.28□□□□□ -0.28
SPTAN1-204ENST00000461855 MBIPQ9NS73 344 aa13.28□□□□□ -0.28
SPTAN1-204ENST00000461855 NRXN2Q9P2S2 1712 aa13.27□□□□□ -0.28
SPTAN1-204ENST00000461855 GNAI1P63096 354 aa13.27□□□□□ -0.29
SPTAN1-204ENST00000461855 TBC1D9BQ66K14 1250 aa13.27□□□□□ -0.29
SPTAN1-204ENST00000461855 WWC1Q8IX03 1113 aa13.27□□□□□ -0.29
SPTAN1-204ENST00000461855 SCN7AQ01118 1682 aa13.27□□□□□ -0.29
SPTAN1-204ENST00000461855 PXDNLA1KZ92 1463 aa13.26□□□□□ -0.29
SPTAN1-204ENST00000461855 ERVV-1B6SEH8 477 aa13.26□□□□□ -0.29
SPTAN1-204ENST00000461855 SERPINB2P05120 415 aa13.26□□□□□ -0.29
SPTAN1-204ENST00000461855 KCNA3P22001 575 aa13.26□□□□□ -0.29
SPTAN1-204ENST00000461855 KRT24Q2M2I5 525 aa13.26□□□□□ -0.29
SPTAN1-204ENST00000461855 KLHL34Q8N239 644 aa13.26□□□□□ -0.29
SPTAN1-204ENST00000461855 NGEFQ8N5V2 710 aa13.26□□□□□ -0.29
SPTAN1-204ENST00000461855 KIAA1551Q9HCM1 1747 aa13.26□□□□□ -0.29
SPTAN1-204ENST00000461855 IL16Q14005 1332 aa13.25□□□□□ -0.29
SPTAN1-204ENST00000461855 DCAF8L1A6NGE4 600 aa13.25□□□□□ -0.29
SPTAN1-204ENST00000461855 CCER2I3L3R5 266 aa13.25□□□□□ -0.29
SPTAN1-204ENST00000461855 YBX3P16989 372 aaKnown RBP eCLIP13.25□□□□□ -0.29
SPTAN1-204ENST00000461855 NPM2Q86SE8 214 aaKnown RBP13.25□□□□□ -0.29
SPTAN1-204ENST00000461855 BCORQ6W2J9 1755 aa13.25□□□□□ -0.29
SPTAN1-204ENST00000461855 ZNF330Q9Y3S2 320 aaPredicted RBP13.24□□□□□ -0.29
SPTAN1-204ENST00000461855 LAS1LQ9Y4W2 734 aaKnown RBP13.24□□□□□ -0.29
SPTAN1-204ENST00000461855 CARMIL3Q8ND23 1372 aa13.23□□□□□ -0.29
SPTAN1-204ENST00000461855 MAP3K15Q6ZN16 1313 aa13.23□□□□□ -0.29
SPTAN1-204ENST00000461855 HLFQ16534 295 aa13.23□□□□□ -0.29
SPTAN1-204ENST00000461855 DUSP27Q5VZP5 1158 aa13.23□□□□□ -0.29
SPTAN1-204ENST00000461855 TTLL7Q6ZT98 887 aa13.23□□□□□ -0.29
SPTAN1-204ENST00000461855 WDR63Q8IWG1 891 aa13.23□□□□□ -0.29
SPTAN1-204ENST00000461855 DDX21Q9NR30 783 aaKnown RBP eCLIP13.23□□□□□ -0.29
SPTAN1-204ENST00000461855 A0A0G2JLW4 131 aa13.22□□□□□ -0.29
SPTAN1-204ENST00000461855 GRIN3BO60391 1043 aa13.22□□□□□ -0.29
SPTAN1-204ENST00000461855 MYL6BP14649 208 aa13.22□□□□□ -0.29
SPTAN1-204ENST00000461855 DPEP1P16444 411 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms