RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 BTBD6Q96KE9 485 aa10.09□□□□□ -0.79
CFHR3-204ENST00000461558 GDPD2Q9HCC8 539 aa10.09□□□□□ -0.79
CFHR3-204ENST00000461558 ATP4AP20648 1035 aa10.08□□□□□ -0.8
CFHR3-204ENST00000461558 DGKGP49619 791 aa10.08□□□□□ -0.8
CFHR3-204ENST00000461558 FIGNL1Q6PIW4 674 aa10.08□□□□□ -0.8
CFHR3-204ENST00000461558 C1orf216Q8TAB5 229 aa10.08□□□□□ -0.8
CFHR3-204ENST00000461558 DNAAF2Q9NVR5 837 aaKnown RBP10.08□□□□□ -0.8
CFHR3-204ENST00000461558 ARAFP10398 606 aa10.07□□□□□ -0.8
CFHR3-204ENST00000461558 ABL2P42684 1182 aa10.07□□□□□ -0.8
CFHR3-204ENST00000461558 CHRNA4P43681 627 aa10.07□□□□□ -0.8
CFHR3-204ENST00000461558 MAP7D1Q3KQU3 841 aa10.07□□□□□ -0.8
CFHR3-204ENST00000461558 PLPP7Q8NBV4 271 aa10.07□□□□□ -0.8
CFHR3-204ENST00000461558 NIFKQ9BYG3 293 aaKnown RBP10.07□□□□□ -0.8
CFHR3-204ENST00000461558 ZCCHC2Q9C0B9 1178 aaKnown RBP10.06□□□□□ -0.8
CFHR3-204ENST00000461558 PCDHGC4Q9Y5F7 938 aa10.06□□□□□ -0.8
CFHR3-204ENST00000461558 NEURL1BA8MQ27 555 aa10.05□□□□□ -0.8
CFHR3-204ENST00000461558 SMTNP53814 917 aa10.05□□□□□ -0.8
CFHR3-204ENST00000461558 WASHC4Q2M389 1173 aa10.05□□□□□ -0.8
CFHR3-204ENST00000461558 NLRP8Q86W28 1048 aa10.05□□□□□ -0.8
CFHR3-204ENST00000461558 TPRNQ4KMQ1 711 aa10.04□□□□□ -0.8
CFHR3-204ENST00000461558 AIDAQ96BJ3 306 aa10.04□□□□□ -0.8
CFHR3-204ENST00000461558 ZNF295-AS1Q8N0V1 137 aa10.03□□□□□ -0.8
CFHR3-204ENST00000461558 SERTAD1Q9UHV2 236 aa10.03□□□□□ -0.8
CFHR3-204ENST00000461558 TMEM229AB2RXF0 380 aa10.02□□□□□ -0.81
CFHR3-204ENST00000461558 ATXN7O15265 892 aaPredicted RBP10.02□□□□□ -0.81
CFHR3-204ENST00000461558 SOX11P35716 441 aa10.02□□□□□ -0.81
CFHR3-204ENST00000461558 SEMA3FQ13275 785 aa10.02□□□□□ -0.81
CFHR3-204ENST00000461558 CHSY3Q70JA7 882 aa10.02□□□□□ -0.81
CFHR3-204ENST00000461558 SLC4A9Q96Q91 983 aa10.02□□□□□ -0.81
CFHR3-204ENST00000461558 A0A1W2PNR3 127 aa10.01□□□□□ -0.81
CFHR3-204ENST00000461558 DCDC2BA2VCK2 349 aa10.01□□□□□ -0.81
CFHR3-204ENST00000461558 MTFR1Q15390 333 aa10.01□□□□□ -0.81
CFHR3-204ENST00000461558 NBPF1Q3BBV0 1214 aa10.01□□□□□ -0.81
CFHR3-204ENST00000461558 SEMA6BQ9H3T3 888 aa10.01□□□□□ -0.81
CFHR3-204ENST00000461558 HCN2Q9UL51 889 aa10.01□□□□□ -0.81
CFHR3-204ENST00000461558 IQSEC3Q9UPP2 1182 aaPredicted RBP10.01□□□□□ -0.81
CFHR3-204ENST00000461558 A6NJY4 79 aa10□□□□□ -0.81
CFHR3-204ENST00000461558 ITGB7P26010 798 aa10□□□□□ -0.81
CFHR3-204ENST00000461558 ADH6P28332 368 aa10□□□□□ -0.81
CFHR3-204ENST00000461558 DOC2BQ14184 412 aa10□□□□□ -0.81
CFHR3-204ENST00000461558 ARSJQ5FYB0 599 aaPredicted RBP10□□□□□ -0.81
CFHR3-204ENST00000461558 CDK2AP1O14519 115 aa9.99□□□□□ -0.81
CFHR3-204ENST00000461558 MAPTP10636 758 aaKnown RBP9.99□□□□□ -0.81
CFHR3-204ENST00000461558 TNP2Q05952 138 aa9.99□□□□□ -0.81
CFHR3-204ENST00000461558 MCM6Q14566 821 aa9.99□□□□□ -0.81
CFHR3-204ENST00000461558 FAM182BQ5T319 152 aa9.99□□□□□ -0.81
CFHR3-204ENST00000461558 ZDHHC3Q9NYG2 299 aa9.99□□□□□ -0.81
CFHR3-204ENST00000461558 USP3Q9Y6I4 520 aa9.99□□□□□ -0.81
CFHR3-204ENST00000461558 TATP17735 454 aaPredicted RBP9.98□□□□□ -0.81
CFHR3-204ENST00000461558 CD33P20138 364 aa9.98□□□□□ -0.81
CFHR3-204ENST00000461558 ZMYM1Q5SVZ6 1142 aa9.98□□□□□ -0.81
CFHR3-204ENST00000461558 AVENQ9NQS1 362 aaPredicted RBP9.98□□□□□ -0.81
CFHR3-204ENST00000461558 PCDHGA11Q9Y5H2 935 aa9.98□□□□□ -0.81
CFHR3-204ENST00000461558 PIK3CDO00329 1044 aa9.97□□□□□ -0.81
CFHR3-204ENST00000461558 KLF15Q9UIH9 416 aa9.97□□□□□ -0.81
CFHR3-204ENST00000461558 KHNYNO15037 678 aaKnown RBP9.96□□□□□ -0.82
CFHR3-204ENST00000461558 FAM157BP0CG42 384 aa9.96□□□□□ -0.82
CFHR3-204ENST00000461558 GATA4P43694 442 aa9.96□□□□□ -0.82
CFHR3-204ENST00000461558 KRTAP1-3Q8IUG1 177 aa9.96□□□□□ -0.82
CFHR3-204ENST00000461558 ZIC5Q96T25 663 aa9.96□□□□□ -0.82
CFHR3-204ENST00000461558 CABP1Q9NZU7 370 aa9.96□□□□□ -0.82
CFHR3-204ENST00000461558 EML3Q32P44 896 aa9.95□□□□□ -0.82
CFHR3-204ENST00000461558 FCHSD1Q86WN1 690 aa9.95□□□□□ -0.82
CFHR3-204ENST00000461558 SPATA31C1P0DKV0 1188 aa9.94□□□□□ -0.82
CFHR3-204ENST00000461558 GJA3Q9Y6H8 435 aa9.94□□□□□ -0.82
CFHR3-204ENST00000461558 BACH1O14867 736 aa9.93□□□□□ -0.82
CFHR3-204ENST00000461558 SAMD5Q5TGI4 173 aa9.93□□□□□ -0.82
CFHR3-204ENST00000461558 ZNF468Q5VIY5 522 aaPredicted RBP9.93□□□□□ -0.82
CFHR3-204ENST00000461558 TRIM11Q96F44 468 aa9.93□□□□□ -0.82
CFHR3-204ENST00000461558 PLVAPQ9BX97 442 aa9.93□□□□□ -0.82
CFHR3-204ENST00000461558 PARP3Q9Y6F1 533 aa9.93□□□□□ -0.82
CFHR3-204ENST00000461558 SKIP12755 728 aa9.92□□□□□ -0.82
CFHR3-204ENST00000461558 GTF2IP78347 998 aa9.92□□□□□ -0.82
CFHR3-204ENST00000461558 NOD1Q9Y239 953 aa9.92□□□□□ -0.82
CFHR3-204ENST00000461558 COG6Q9Y2V7 657 aa9.92□□□□□ -0.82
CFHR3-204ENST00000461558 EFSO43281 561 aa9.91□□□□□ -0.82
CFHR3-204ENST00000461558 PCBP4P57723 403 aaKnown RBP9.91□□□□□ -0.82
CFHR3-204ENST00000461558 BICDL1Q6ZP65 573 aa9.91□□□□□ -0.82
CFHR3-204ENST00000461558 SCHIP1Q9P0W5 487 aaPredicted RBP9.91□□□□□ -0.82
CFHR3-204ENST00000461558 PRR12Q9ULL5 1215 aa9.91□□□□□ -0.82
CFHR3-204ENST00000461558 LZTS3O60299 673 aaPredicted RBP9.9□□□□□ -0.82
CFHR3-204ENST00000461558 TXLNAP40222 546 aa9.9□□□□□ -0.82
CFHR3-204ENST00000461558 PSME1Q06323 249 aa9.9□□□□□ -0.82
CFHR3-204ENST00000461558 LAMC2Q13753 1193 aa9.9□□□□□ -0.82
CFHR3-204ENST00000461558 NFATC2IPQ8NCF5 419 aa9.9□□□□□ -0.82
CFHR3-204ENST00000461558 ZDHHC1Q8WTX9 485 aa9.9□□□□□ -0.82
CFHR3-204ENST00000461558 ALG2Q9H553 416 aa9.9□□□□□ -0.82
CFHR3-204ENST00000461558 STRN4Q9NRL3 753 aa9.9□□□□□ -0.82
CFHR3-204ENST00000461558 ZNF358Q9NW07 568 aa9.9□□□□□ -0.82
CFHR3-204ENST00000461558 MARK1Q9P0L2 795 aa9.9□□□□□ -0.82
CFHR3-204ENST00000461558 SCO2A0A1W2PP80 73 aa9.89□□□□□ -0.83
CFHR3-204ENST00000461558 SPDYE3A6NKU9 549 aa9.89□□□□□ -0.83
CFHR3-204ENST00000461558 NCOA4Q13772 614 aa9.89□□□□□ -0.83
CFHR3-204ENST00000461558 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.89□□□□□ -0.83
CFHR3-204ENST00000461558 RSPO4Q2I0M5 234 aaPredicted RBP9.88□□□□□ -0.83
CFHR3-204ENST00000461558 L3MBTL2Q969R5 705 aa9.88□□□□□ -0.83
CFHR3-204ENST00000461558 EPHA4P54764 986 aa9.87□□□□□ -0.83
CFHR3-204ENST00000461558 TEAD4Q15561 434 aa9.87□□□□□ -0.83
CFHR3-204ENST00000461558 PRRT3Q5FWE3 981 aa9.87□□□□□ -0.83
CFHR3-204ENST00000461558 USP17L5A8MUK1 530 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms