RNA–Protein interactions for RNA: ENST00000461428.1

GTPBP1-205, Transcript of GTP binding protein 1, human

TSL 2

Gene GTPBP1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP1-205	ENST00000461428	CCDC87	Q9NVE4	849 aa		13.63	□□□□□ -0.23
GTPBP1-205	ENST00000461428	ADAMTS8	Q9UP79	889 aa		13.63	□□□□□ -0.23
GTPBP1-205	ENST00000461428	BRCA1	P38398	1863 aa	Known RBP	13.63	□□□□□ -0.23
GTPBP1-205	ENST00000461428	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.63	□□□□□ -0.23
GTPBP1-205	ENST00000461428	GOLGB1	Q14789	3259 aa	Known RBP	13.63	□□□□□ -0.23
GTPBP1-205	ENST00000461428	SOS1	Q07889	1333 aa	Predicted RBP	13.63	□□□□□ -0.23
GTPBP1-205	ENST00000461428	GYS1	P13807	737 aa		13.62	□□□□□ -0.23
GTPBP1-205	ENST00000461428	PNISR	Q8TF01	805 aa	Known RBP	13.62	□□□□□ -0.23
GTPBP1-205	ENST00000461428	THUMPD2	Q9BTF0	503 aa	Known RBP	13.62	□□□□□ -0.23
GTPBP1-205	ENST00000461428	ZBTB1	Q9Y2K1	713 aa		13.62	□□□□□ -0.23
GTPBP1-205	ENST00000461428	SCN7A	Q01118	1682 aa		13.62	□□□□□ -0.23
GTPBP1-205	ENST00000461428	NRXN2	Q9P2S2	1712 aa		13.61	□□□□□ -0.23
GTPBP1-205	ENST00000461428	PRAMEF22	A3QJZ6	481 aa		13.61	□□□□□ -0.23
GTPBP1-205	ENST00000461428	NEFM	P07197	916 aa		13.61	□□□□□ -0.23
GTPBP1-205	ENST00000461428	TMPO	P42166	694 aa	Known RBP	13.61	□□□□□ -0.23
GTPBP1-205	ENST00000461428	TAF7	Q15545	349 aa	Predicted RBP	13.61	□□□□□ -0.23
GTPBP1-205	ENST00000461428	CCDC146	Q8IYE0	955 aa		13.61	□□□□□ -0.23
GTPBP1-205	ENST00000461428	FMNL2	Q96PY5	1086 aa		13.61	□□□□□ -0.23
GTPBP1-205	ENST00000461428	USP42	Q9H9J4	1324 aa	Known RBP	13.61	□□□□□ -0.23
GTPBP1-205	ENST00000461428	MAPK8IP3	Q9UPT6	1336 aa		13.61	□□□□□ -0.23
GTPBP1-205	ENST00000461428	RUNDC1	Q96C34	613 aa		13.6	□□□□□ -0.23
GTPBP1-205	ENST00000461428	MIS18A	Q9NYP9	233 aa		13.6	□□□□□ -0.23
GTPBP1-205	ENST00000461428	SRP68	Q9UHB9	627 aa	Known RBP	13.6	□□□□□ -0.23
GTPBP1-205	ENST00000461428	USP16	Q9Y5T5	823 aa		13.6	□□□□□ -0.23
GTPBP1-205	ENST00000461428	COL15A1	P39059	1388 aa		13.59	□□□□□ -0.23
GTPBP1-205	ENST00000461428	RFC4	P35249	363 aa		13.59	□□□□□ -0.23
GTPBP1-205	ENST00000461428	RIPK4	P57078	832 aa		13.59	□□□□□ -0.23
GTPBP1-205	ENST00000461428	NLGN2	Q8NFZ4	835 aa		13.59	□□□□□ -0.23
GTPBP1-205	ENST00000461428	NUP98	P52948	1817 aa		13.58	□□□□□ -0.24
GTPBP1-205	ENST00000461428	EIF5	P55010	431 aa	Known RBP	13.58	□□□□□ -0.24
GTPBP1-205	ENST00000461428	NLGN1	Q8N2Q7	840 aa		13.58	□□□□□ -0.24
GTPBP1-205	ENST00000461428	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.58	□□□□□ -0.24
GTPBP1-205	ENST00000461428	TRIM35	Q9UPQ4	493 aa		13.58	□□□□□ -0.24
GTPBP1-205	ENST00000461428	RRP7A	Q9Y3A4	280 aa	Known RBP	13.58	□□□□□ -0.24
GTPBP1-205	ENST00000461428	STARD3NL	O95772	234 aa		13.57	□□□□□ -0.24
GTPBP1-205	ENST00000461428	A1BG	P04217	495 aa		13.57	□□□□□ -0.24
GTPBP1-205	ENST00000461428	MMP10	P09238	476 aa		13.57	□□□□□ -0.24
GTPBP1-205	ENST00000461428	FKBP8	Q14318	412 aa		13.57	□□□□□ -0.24
GTPBP1-205	ENST00000461428	BCL2L12	Q9HB09	334 aa		13.57	□□□□□ -0.24
GTPBP1-205	ENST00000461428	CANX	P27824	592 aa	Known RBP	13.56	□□□□□ -0.24
GTPBP1-205	ENST00000461428	EIF4A1	P60842	406 aa	Known RBP	13.56	□□□□□ -0.24
GTPBP1-205	ENST00000461428	USPL1	Q5W0Q7	1092 aa		13.56	□□□□□ -0.24
GTPBP1-205	ENST00000461428	NARF	Q9UHQ1	456 aa		13.56	□□□□□ -0.24
GTPBP1-205	ENST00000461428	CD2AP	Q9Y5K6	639 aa		13.56	□□□□□ -0.24
GTPBP1-205	ENST00000461428	ANKRD31	Q8N7Z5	1873 aa		13.56	□□□□□ -0.24
GTPBP1-205	ENST00000461428	SENP3-EIF4A1	A0A087X0R7	540 aa		13.55	□□□□□ -0.24
GTPBP1-205	ENST00000461428	SNRPA1	P09661	255 aa	Known RBP	13.55	□□□□□ -0.24
GTPBP1-205	ENST00000461428	TM4SF1	P30408	202 aa		13.55	□□□□□ -0.24
GTPBP1-205	ENST00000461428	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
GTPBP1-205	ENST00000461428	KLHL34	Q8N239	644 aa		13.55	□□□□□ -0.24
GTPBP1-205	ENST00000461428	DLEC1	Q9Y238	1755 aa		13.55	□□□□□ -0.24
GTPBP1-205	ENST00000461428	C10orf71	Q711Q0	1435 aa		13.55	□□□□□ -0.24
GTPBP1-205	ENST00000461428	NBPF26	B4DH59	902 aa		13.54	□□□□□ -0.24
GTPBP1-205	ENST00000461428	IL6ST	P40189	918 aa	Predicted RBP	13.54	□□□□□ -0.24
GTPBP1-205	ENST00000461428	DDR1	Q08345	913 aa		13.54	□□□□□ -0.24
GTPBP1-205	ENST00000461428	NEUROD2	Q15784	382 aa		13.54	□□□□□ -0.24
GTPBP1-205	ENST00000461428	NBPF10	Q6P3W6	841 aa	Known RBP	13.54	□□□□□ -0.24
GTPBP1-205	ENST00000461428	NBPF15	Q8N660	670 aa		13.54	□□□□□ -0.24
GTPBP1-205	ENST00000461428	ARFGEF1	Q9Y6D6	1849 aa		13.54	□□□□□ -0.24
GTPBP1-205	ENST00000461428	GIGYF1	O75420	1035 aa	Predicted RBP	13.53	□□□□□ -0.24
GTPBP1-205	ENST00000461428	PIP4K2A	P48426	406 aa	Predicted RBP	13.53	□□□□□ -0.24
GTPBP1-205	ENST00000461428	POLRMT	O00411	1230 aa	Known RBP	13.52	□□□□□ -0.25
GTPBP1-205	ENST00000461428	APAF1	O14727	1248 aa		13.52	□□□□□ -0.25
GTPBP1-205	ENST00000461428	ZPR1	O75312	459 aa		13.52	□□□□□ -0.25
GTPBP1-205	ENST00000461428	LMOD3	Q0VAK6	560 aa		13.52	□□□□□ -0.25
GTPBP1-205	ENST00000461428	BABAM1	Q9NWV8	329 aa		13.52	□□□□□ -0.25
GTPBP1-205	ENST00000461428	PXDNL	A1KZ92	1463 aa		13.52	□□□□□ -0.25
GTPBP1-205	ENST00000461428		A0A087WZG4	1122 aa		13.51	□□□□□ -0.25
GTPBP1-205	ENST00000461428	CHL1	O00533	1208 aa		13.51	□□□□□ -0.25
GTPBP1-205	ENST00000461428	CAMTA2	O94983	1202 aa		13.51	□□□□□ -0.25
GTPBP1-205	ENST00000461428	YBX3	P16989	372 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
GTPBP1-205	ENST00000461428	NFIX	Q14938	502 aa		13.51	□□□□□ -0.25
GTPBP1-205	ENST00000461428	TSPYL4	Q9UJ04	414 aa		13.51	□□□□□ -0.25
GTPBP1-205	ENST00000461428	TBC1D2B	Q9UPU7	963 aa		13.51	□□□□□ -0.25
GTPBP1-205	ENST00000461428	SALL2	Q9Y467	1007 aa	Predicted RBP	13.51	□□□□□ -0.25
GTPBP1-205	ENST00000461428	PARP3	Q9Y6F1	533 aa		13.5	□□□□□ -0.25
GTPBP1-205	ENST00000461428	CACNA1S	Q13698	1873 aa		13.49	□□□□□ -0.25
GTPBP1-205	ENST00000461428	ZNF853	P0CG23	659 aa		13.49	□□□□□ -0.25
GTPBP1-205	ENST00000461428	ANKRD36C	Q5JPF3	1778 aa		13.49	□□□□□ -0.25
GTPBP1-205	ENST00000461428	COL11A2	P13942	1736 aa	Predicted RBP	13.49	□□□□□ -0.25
GTPBP1-205	ENST00000461428	TGFB2	P61812	414 aa		13.48	□□□□□ -0.25
GTPBP1-205	ENST00000461428	TBC1D9B	Q66K14	1250 aa		13.48	□□□□□ -0.25
GTPBP1-205	ENST00000461428	LRP10	Q7Z4F1	713 aa		13.48	□□□□□ -0.25
GTPBP1-205	ENST00000461428	DZIP3	Q86Y13	1208 aa	Known RBP	13.48	□□□□□ -0.25
GTPBP1-205	ENST00000461428	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.48	□□□□□ -0.25
GTPBP1-205	ENST00000461428	SBF1	O95248	1867 aa		13.47	□□□□□ -0.25
GTPBP1-205	ENST00000461428	DCAF8L1	A6NGE4	600 aa		13.47	□□□□□ -0.25
GTPBP1-205	ENST00000461428	KCNA3	P22001	575 aa		13.47	□□□□□ -0.25
GTPBP1-205	ENST00000461428	PDIA6	Q15084	440 aa		13.47	□□□□□ -0.25
GTPBP1-205	ENST00000461428	GPR162	Q16538	588 aa		13.47	□□□□□ -0.25
GTPBP1-205	ENST00000461428	KRT24	Q2M2I5	525 aa		13.47	□□□□□ -0.25
GTPBP1-205	ENST00000461428	CARMIL3	Q8ND23	1372 aa		13.46	□□□□□ -0.25
GTPBP1-205	ENST00000461428	ARFGEF2	Q9Y6D5	1785 aa		13.46	□□□□□ -0.25
GTPBP1-205	ENST00000461428		A0A0G2JLW4	131 aa		13.46	□□□□□ -0.25
GTPBP1-205	ENST00000461428	SERPINB2	P05120	415 aa		13.46	□□□□□ -0.25
GTPBP1-205	ENST00000461428	CFAP44	Q96MT7	982 aa		13.46	□□□□□ -0.25
GTPBP1-205	ENST00000461428	CCDC88A	Q3V6T2	1871 aa		13.46	□□□□□ -0.26
GTPBP1-205	ENST00000461428	DPEP1	P16444	411 aa		13.45	□□□□□ -0.26
GTPBP1-205	ENST00000461428	BICDL1	Q6ZP65	573 aa		13.45	□□□□□ -0.26
GTPBP1-205	ENST00000461428	MBIP	Q9NS73	344 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms