RNA–Protein interactions for RNA: ENST00000459741.5

TRAPPC10-204, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 5,826 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-204ENST00000459741 GJB2P29033 226 aa13.3□□□□□ -0.28
TRAPPC10-204ENST00000459741 SYCP1Q15431 976 aa13.3□□□□□ -0.28
TRAPPC10-204ENST00000459741 MRC2Q9UBG0 1479 aa13.3□□□□□ -0.28
TRAPPC10-204ENST00000459741 CNNM1Q9NRU3 951 aa13.3□□□□□ -0.28
TRAPPC10-204ENST00000459741 FAM135AQ9P2D6 1515 aa13.3□□□□□ -0.28
TRAPPC10-204ENST00000459741 GDPD2Q9HCC8 539 aa13.3□□□□□ -0.28
TRAPPC10-204ENST00000459741 HSP90AB3PQ58FF7 597 aa13.29□□□□□ -0.28
TRAPPC10-204ENST00000459741 KIF14Q15058 1648 aa13.29□□□□□ -0.28
TRAPPC10-204ENST00000459741 THUMPD2Q9BTF0 503 aaKnown RBP13.29□□□□□ -0.28
TRAPPC10-204ENST00000459741 IMMTQ16891 758 aaKnown RBP13.29□□□□□ -0.28
TRAPPC10-204ENST00000459741 PIK3C2GO75747 1445 aa13.29□□□□□ -0.28
TRAPPC10-204ENST00000459741 PTPRKQ15262 1439 aa13.29□□□□□ -0.28
TRAPPC10-204ENST00000459741 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
TRAPPC10-204ENST00000459741 KIF4BQ2VIQ3 1234 aa13.29□□□□□ -0.28
TRAPPC10-204ENST00000459741 RRAGDQ9NQL2 400 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC10-204ENST00000459741 POLR3AO14802 1390 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC10-204ENST00000459741 KIAA1328Q86T90 577 aa13.28□□□□□ -0.28
TRAPPC10-204ENST00000459741 ANKRD36BQ8N2N9 1353 aa13.28□□□□□ -0.28
TRAPPC10-204ENST00000459741 GNAT3A8MTJ3 354 aa13.28□□□□□ -0.28
TRAPPC10-204ENST00000459741 ZRSR2Q15696 482 aaKnown RBP13.28□□□□□ -0.28
TRAPPC10-204ENST00000459741 FEZ1Q99689 392 aa13.28□□□□□ -0.28
TRAPPC10-204ENST00000459741 KDM2BQ8NHM5 1336 aa13.28□□□□□ -0.28
TRAPPC10-204ENST00000459741 GTF2F1P35269 517 aaKnown RBP eCLIP13.28□□□□□ -0.28
TRAPPC10-204ENST00000459741 PRIM1P49642 420 aaKnown RBP13.28□□□□□ -0.28
TRAPPC10-204ENST00000459741 SKIDA1Q1XH10 827 aa13.28□□□□□ -0.28
TRAPPC10-204ENST00000459741 ZNF530Q6P9A1 599 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC10-204ENST00000459741 TRMT1Q9NXH9 659 aaKnown RBP13.28□□□□□ -0.28
TRAPPC10-204ENST00000459741 ARHGEF11O15085 1522 aa13.28□□□□□ -0.28
TRAPPC10-204ENST00000459741 RBM5P52756 815 aaKnown RBP eCLIP13.28□□□□□ -0.28
TRAPPC10-204ENST00000459741 UGGT2Q9NYU1 1516 aa13.28□□□□□ -0.28
TRAPPC10-204ENST00000459741 FAM193AP78312 1265 aa13.28□□□□□ -0.28
TRAPPC10-204ENST00000459741 ZSCAN16Q9H4T2 348 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC10-204ENST00000459741 POLR3GO15318 223 aaPredicted RBP13.27□□□□□ -0.28
TRAPPC10-204ENST00000459741 EVI5LQ96CN4 794 aa13.27□□□□□ -0.28
TRAPPC10-204ENST00000459741 CCDC57Q2TAC2 916 aa13.27□□□□□ -0.28
TRAPPC10-204ENST00000459741 FSIP1Q8NA03 581 aa13.27□□□□□ -0.28
TRAPPC10-204ENST00000459741 TATP17735 454 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC10-204ENST00000459741 RRS1Q15050 365 aaKnown RBP13.27□□□□□ -0.29
TRAPPC10-204ENST00000459741 MICALCLQ6ZW33 695 aa13.27□□□□□ -0.29
TRAPPC10-204ENST00000459741 GIMAP7Q8NHV1 300 aa13.27□□□□□ -0.29
TRAPPC10-204ENST00000459741 NESP48681 1621 aa13.27□□□□□ -0.29
TRAPPC10-204ENST00000459741 C8orf76Q96K31 380 aa13.27□□□□□ -0.29
TRAPPC10-204ENST00000459741 HMG20BQ9P0W2 317 aa13.27□□□□□ -0.29
TRAPPC10-204ENST00000459741 LRRFIP2Q9Y608 721 aaKnown RBP13.27□□□□□ -0.29
TRAPPC10-204ENST00000459741 SDSP20132 328 aa13.26□□□□□ -0.29
TRAPPC10-204ENST00000459741 SRRTQ9BXP5 876 aaKnown RBP13.26□□□□□ -0.29
TRAPPC10-204ENST00000459741 ZNF397Q8NF99 534 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC10-204ENST00000459741 TMC6Q7Z403 805 aa13.26□□□□□ -0.29
TRAPPC10-204ENST00000459741 INTS4Q96HW7 963 aaKnown RBP13.26□□□□□ -0.29
TRAPPC10-204ENST00000459741 USP48Q86UV5 1035 aa13.26□□□□□ -0.29
TRAPPC10-204ENST00000459741 CEP126Q9P2H0 1117 aa13.26□□□□□ -0.29
TRAPPC10-204ENST00000459741 CCDC61Q9Y6R9 512 aa13.26□□□□□ -0.29
TRAPPC10-204ENST00000459741 SNAPC4Q5SXM2 1469 aa13.26□□□□□ -0.29
TRAPPC10-204ENST00000459741 TXNDC2Q86VQ3 553 aa13.26□□□□□ -0.29
TRAPPC10-204ENST00000459741 PEG3Q9GZU2 1588 aa13.25□□□□□ -0.29
TRAPPC10-204ENST00000459741 EIF5P55010 431 aaKnown RBP13.25□□□□□ -0.29
TRAPPC10-204ENST00000459741 GIMAP6Q6P9H5 292 aa13.25□□□□□ -0.29
TRAPPC10-204ENST00000459741 ANKRD44Q8N8A2 993 aa13.25□□□□□ -0.29
TRAPPC10-204ENST00000459741 TAF4BQ92750 862 aa13.25□□□□□ -0.29
TRAPPC10-204ENST00000459741 ECHDC1Q9NTX5 307 aa13.25□□□□□ -0.29
TRAPPC10-204ENST00000459741 PHAXQ9H814 394 aaKnown RBP13.25□□□□□ -0.29
TRAPPC10-204ENST00000459741 PRAG1Q86YV5 1406 aa13.24□□□□□ -0.29
TRAPPC10-204ENST00000459741 ARHGEF12Q9NZN5 1544 aa13.24□□□□□ -0.29
TRAPPC10-204ENST00000459741 IVLP07476 585 aa13.24□□□□□ -0.29
TRAPPC10-204ENST00000459741 MCM10Q7L590 875 aa13.24□□□□□ -0.29
TRAPPC10-204ENST00000459741 TCOF1Q13428 1488 aaKnown RBP13.24□□□□□ -0.29
TRAPPC10-204ENST00000459741 CABP4P57796 275 aa13.24□□□□□ -0.29
TRAPPC10-204ENST00000459741 TOM1L2Q6ZVM7 507 aa13.24□□□□□ -0.29
TRAPPC10-204ENST00000459741 OGFRQ9NZT2 677 aa13.24□□□□□ -0.29
TRAPPC10-204ENST00000459741 CCDC186Q7Z3E2 898 aa13.24□□□□□ -0.29
TRAPPC10-204ENST00000459741 ESYT1Q9BSJ8 1104 aa13.24□□□□□ -0.29
TRAPPC10-204ENST00000459741 SLU7O95391 586 aaKnown RBP13.24□□□□□ -0.29
TRAPPC10-204ENST00000459741 SPA17Q15506 151 aa13.24□□□□□ -0.29
TRAPPC10-204ENST00000459741 SMARCC1Q92922 1105 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC10-204ENST00000459741 BTBD11A6QL63 1104 aa13.23□□□□□ -0.29
TRAPPC10-204ENST00000459741 DDX54Q8TDD1 881 aaKnown RBP13.23□□□□□ -0.29
TRAPPC10-204ENST00000459741 MPHOSPH10O00566 681 aaKnown RBP13.23□□□□□ -0.29
TRAPPC10-204ENST00000459741 SKILP12757 684 aa13.23□□□□□ -0.29
TRAPPC10-204ENST00000459741 INCENPQ9NQS7 918 aa13.23□□□□□ -0.29
TRAPPC10-204ENST00000459741 ZMYM3Q14202 1370 aa13.23□□□□□ -0.29
TRAPPC10-204ENST00000459741 F13A1P00488 732 aa13.23□□□□□ -0.29
TRAPPC10-204ENST00000459741 TAF7Q15545 349 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC10-204ENST00000459741 UBAC1Q9BSL1 405 aa13.23□□□□□ -0.29
TRAPPC10-204ENST00000459741 CENPHQ9H3R5 247 aa13.23□□□□□ -0.29
TRAPPC10-204ENST00000459741 MBIPQ9NS73 344 aa13.23□□□□□ -0.29
TRAPPC10-204ENST00000459741 ZNF445P59923 1031 aa13.23□□□□□ -0.29
TRAPPC10-204ENST00000459741 STK11IPQ8N1F8 1099 aa13.23□□□□□ -0.29
TRAPPC10-204ENST00000459741 ZNF830Q96NB3 372 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC10-204ENST00000459741 FKBP4Q02790 459 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRAPPC10-204ENST00000459741 TFIP11Q9UBB9 837 aaKnown RBP13.22□□□□□ -0.29
TRAPPC10-204ENST00000459741 SEC24BO95487 1268 aa13.22□□□□□ -0.29
TRAPPC10-204ENST00000459741 PDE1AP54750 535 aa13.22□□□□□ -0.29
TRAPPC10-204ENST00000459741 TUBB4BP68371 445 aa13.22□□□□□ -0.29
TRAPPC10-204ENST00000459741 NUDT16Q96DE0 195 aaKnown RBP13.22□□□□□ -0.29
TRAPPC10-204ENST00000459741 CNPY2Q9Y2B0 182 aa13.22□□□□□ -0.29
TRAPPC10-204ENST00000459741 EIF2AK4Q9P2K8 1649 aaKnown RBP13.22□□□□□ -0.29
TRAPPC10-204ENST00000459741 CCDC196A0A1B0GTZ2 297 aa13.22□□□□□ -0.29
TRAPPC10-204ENST00000459741 KIF20AO95235 890 aa13.22□□□□□ -0.29
TRAPPC10-204ENST00000459741 YEATS4O95619 227 aa13.22□□□□□ -0.29
TRAPPC10-204ENST00000459741 FLIIQ13045 1269 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms