RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 ATAD2Q6PL18 1390 aa5.93□□□□□ -1.46
SCARNA18-201ENST00000459004 H7C1W4 665 aa5.93□□□□□ -1.46
SCARNA18-201ENST00000459004 WFS1O76024 890 aa5.93□□□□□ -1.46
SCARNA18-201ENST00000459004 MSX1P28360 303 aa5.93□□□□□ -1.46
SCARNA18-201ENST00000459004 PSMA6P60900 246 aaKnown RBP5.93□□□□□ -1.46
SCARNA18-201ENST00000459004 SWI5Q1ZZU3 235 aa5.93□□□□□ -1.46
SCARNA18-201ENST00000459004 TBCELQ5QJ74 424 aa5.93□□□□□ -1.46
SCARNA18-201ENST00000459004 TREML4Q6UXN2 200 aa5.93□□□□□ -1.46
SCARNA18-201ENST00000459004 C1orf216Q8TAB5 229 aa5.93□□□□□ -1.46
SCARNA18-201ENST00000459004 NANOS1Q8WY41 292 aaKnown RBP5.93□□□□□ -1.46
SCARNA18-201ENST00000459004 AIDAQ96BJ3 306 aa5.93□□□□□ -1.46
SCARNA18-201ENST00000459004 SERTM1A2A2V5 107 aa5.92□□□□□ -1.46
SCARNA18-201ENST00000459004 IGFBP4P22692 258 aa5.92□□□□□ -1.46
SCARNA18-201ENST00000459004 NBPF1Q3BBV0 1214 aa5.92□□□□□ -1.46
SCARNA18-201ENST00000459004 RIPOR1Q6ZS17 1223 aa5.92□□□□□ -1.46
SCARNA18-201ENST00000459004 SV2AQ7L0J3 742 aa5.92□□□□□ -1.46
SCARNA18-201ENST00000459004 STAG2Q8N3U4 1231 aa5.92□□□□□ -1.46
SCARNA18-201ENST00000459004 ZDHHC1Q8WTX9 485 aa5.92□□□□□ -1.46
SCARNA18-201ENST00000459004 STK32AQ8WU08 396 aa5.92□□□□□ -1.46
SCARNA18-201ENST00000459004 SCG3Q8WXD2 468 aaKnown RBP5.92□□□□□ -1.46
SCARNA18-201ENST00000459004 IRF7Q92985 503 aa5.92□□□□□ -1.46
SCARNA18-201ENST00000459004 L3MBTL2Q969R5 705 aa5.92□□□□□ -1.46
SCARNA18-201ENST00000459004 C21orf2O43822 256 aa5.91□□□□□ -1.46
SCARNA18-201ENST00000459004 PPP1R12BO60237 982 aaPredicted RBP5.91□□□□□ -1.46
SCARNA18-201ENST00000459004 CSB-PGBD3P0DP91 1061 aa5.91□□□□□ -1.46
SCARNA18-201ENST00000459004 FAM69CQ0P6D2 419 aa5.91□□□□□ -1.46
SCARNA18-201ENST00000459004 DBN1Q16643 649 aa5.91□□□□□ -1.46
SCARNA18-201ENST00000459004 TRIM22Q8IYM9 498 aa5.91□□□□□ -1.46
SCARNA18-201ENST00000459004 PGBD3Q8N328 593 aa5.91□□□□□ -1.46
SCARNA18-201ENST00000459004 VWA5B2Q8N398 1253 aa5.91□□□□□ -1.46
SCARNA18-201ENST00000459004 ZDHHC3Q9NYG2 299 aa5.91□□□□□ -1.46
SCARNA18-201ENST00000459004 ZNF232Q9UNY5 417 aa5.91□□□□□ -1.46
SCARNA18-201ENST00000459004 PARP3Q9Y6F1 533 aa5.91□□□□□ -1.46
SCARNA18-201ENST00000459004 CDC14CA4D256 554 aa5.9□□□□□ -1.46
SCARNA18-201ENST00000459004 EML1O00423 815 aa5.9□□□□□ -1.46
SCARNA18-201ENST00000459004 LGR5O75473 907 aa5.9□□□□□ -1.46
SCARNA18-201ENST00000459004 VSIG8P0DPA2 414 aa5.9□□□□□ -1.46
SCARNA18-201ENST00000459004 TATP17735 454 aaPredicted RBP5.9□□□□□ -1.46
SCARNA18-201ENST00000459004 WEE1P30291 646 aa5.9□□□□□ -1.46
SCARNA18-201ENST00000459004 HIRAP54198 1017 aaPredicted RBP5.9□□□□□ -1.46
SCARNA18-201ENST00000459004 LBRQ14739 615 aaKnown RBP5.9□□□□□ -1.46
SCARNA18-201ENST00000459004 TMEM164Q5U3C3 297 aa5.9□□□□□ -1.46
SCARNA18-201ENST00000459004 POTEAQ6S8J7 498 aa5.9□□□□□ -1.46
SCARNA18-201ENST00000459004 CHMP7Q8WUX9 453 aaPredicted RBP5.9□□□□□ -1.46
SCARNA18-201ENST00000459004 CUEDC1Q9NWM3 386 aaPredicted RBP5.9□□□□□ -1.46
SCARNA18-201ENST00000459004 TXLNAP40222 546 aa5.89□□□□□ -1.47
SCARNA18-201ENST00000459004 EFHC2Q5JST6 749 aa5.89□□□□□ -1.47
SCARNA18-201ENST00000459004 LCE2AQ5TA79 106 aaPredicted RBP5.89□□□□□ -1.47
SCARNA18-201ENST00000459004 C1orf53Q5VUE5 145 aa5.89□□□□□ -1.47
SCARNA18-201ENST00000459004 FOXR1Q6PIV2 292 aa5.89□□□□□ -1.47
SCARNA18-201ENST00000459004 C2orf49Q9BVC5 232 aaPredicted RBP5.89□□□□□ -1.47
SCARNA18-201ENST00000459004 NUCKS1Q9H1E3 243 aaKnown RBP5.89□□□□□ -1.47
SCARNA18-201ENST00000459004 CRISPLD1Q9H336 500 aa5.89□□□□□ -1.47
SCARNA18-201ENST00000459004 RUBCNLQ9H714 662 aa5.89□□□□□ -1.47
SCARNA18-201ENST00000459004 GPAMQ9HCL2 828 aa5.89□□□□□ -1.47
SCARNA18-201ENST00000459004 ERBB4Q15303 1308 aa5.89□□□□□ -1.47
SCARNA18-201ENST00000459004 FOXO3O43524 673 aa5.88□□□□□ -1.47
SCARNA18-201ENST00000459004 ATP4AP20648 1035 aa5.88□□□□□ -1.47
SCARNA18-201ENST00000459004 SH3PXD2AQ5TCZ1 1133 aa5.88□□□□□ -1.47
SCARNA18-201ENST00000459004 GPR161Q8N6U8 529 aaKnown RBP5.88□□□□□ -1.47
SCARNA18-201ENST00000459004 CLP1Q92989 425 aaKnown RBP5.88□□□□□ -1.47
SCARNA18-201ENST00000459004 ZNF837Q96EG3 531 aaPredicted RBP5.88□□□□□ -1.47
SCARNA18-201ENST00000459004 ZIC5Q96T25 663 aa5.88□□□□□ -1.47
SCARNA18-201ENST00000459004 HCN4Q9Y3Q4 1203 aa5.88□□□□□ -1.47
SCARNA18-201ENST00000459004 GPC6Q9Y625 555 aaPredicted RBP5.88□□□□□ -1.47
SCARNA18-201ENST00000459004 ARSJQ5FYB0 599 aaPredicted RBP5.87□□□□□ -1.47
SCARNA18-201ENST00000459004 LCE2CQ5TA81 110 aa5.87□□□□□ -1.47
SCARNA18-201ENST00000459004 BICDL1Q6ZP65 573 aa5.87□□□□□ -1.47
SCARNA18-201ENST00000459004 NLRP8Q86W28 1048 aa5.87□□□□□ -1.47
SCARNA18-201ENST00000459004 PRIMPOLQ96LW4 560 aa5.87□□□□□ -1.47
SCARNA18-201ENST00000459004 PHACTR1Q9C0D0 580 aa5.87□□□□□ -1.47
SCARNA18-201ENST00000459004 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.87□□□□□ -1.47
SCARNA18-201ENST00000459004 A0A1W2PNR3 127 aa5.86□□□□□ -1.47
SCARNA18-201ENST00000459004 TMEM88BA6NKF7 163 aa5.86□□□□□ -1.47
SCARNA18-201ENST00000459004 PRMT3O60678 531 aa5.86□□□□□ -1.47
SCARNA18-201ENST00000459004 THBS1P07996 1170 aa5.86□□□□□ -1.47
SCARNA18-201ENST00000459004 OCLNQ16625 522 aa5.86□□□□□ -1.47
SCARNA18-201ENST00000459004 FIGNL1Q6PIW4 674 aa5.86□□□□□ -1.47
SCARNA18-201ENST00000459004 ALDH16A1Q8IZ83 802 aa5.86□□□□□ -1.47
SCARNA18-201ENST00000459004 C7orf43Q8WVR3 580 aa5.86□□□□□ -1.47
SCARNA18-201ENST00000459004 GTPBP3Q969Y2 492 aaKnown RBP5.86□□□□□ -1.47
SCARNA18-201ENST00000459004 VTI1AQ96AJ9 217 aa5.86□□□□□ -1.47
SCARNA18-201ENST00000459004 TRERF1Q96PN7 1200 aa5.86□□□□□ -1.47
SCARNA18-201ENST00000459004 CFHR5Q9BXR6 569 aa5.86□□□□□ -1.47
SCARNA18-201ENST00000459004 NEUROD4Q9HD90 331 aa5.86□□□□□ -1.47
SCARNA18-201ENST00000459004 CXXC1Q9P0U4 656 aaPredicted RBP5.86□□□□□ -1.47
SCARNA18-201ENST00000459004 GMPRP36959 345 aa5.85□□□□□ -1.47
SCARNA18-201ENST00000459004 UBAP2LQ14157 1087 aaKnown RBP5.85□□□□□ -1.47
SCARNA18-201ENST00000459004 RHPN1Q8TCX5 695 aa5.85□□□□□ -1.47
SCARNA18-201ENST00000459004 ANKIB1Q9P2G1 1089 aa5.85□□□□□ -1.47
SCARNA18-201ENST00000459004 PHF24Q9UPV7 400 aa5.85□□□□□ -1.47
SCARNA18-201ENST00000459004 GJA3Q9Y6H8 435 aa5.85□□□□□ -1.47
SCARNA18-201ENST00000459004 WIPF1O43516 503 aa5.84□□□□□ -1.47
SCARNA18-201ENST00000459004 PDE4CQ08493 712 aa5.84□□□□□ -1.47
SCARNA18-201ENST00000459004 FKBP5Q13451 457 aaPredicted RBP5.84□□□□□ -1.47
SCARNA18-201ENST00000459004 HIF1AQ16665 826 aa5.84□□□□□ -1.47
SCARNA18-201ENST00000459004 NGLY1Q96IV0 654 aa5.84□□□□□ -1.47
SCARNA18-201ENST00000459004 COL25A1Q9BXS0 654 aaPredicted RBP5.84□□□□□ -1.47
SCARNA18-201ENST00000459004 ZCCHC2Q9C0B9 1178 aaKnown RBP5.84□□□□□ -1.47
SCARNA18-201ENST00000459004 USTQ9Y2C2 406 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms