RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 USP42Q9H9J4 1324 aaKnown RBP17.58■□□□□ 0.4
COMMD1-206ENST00000458337 EIF5P55010 431 aaKnown RBP17.58■□□□□ 0.4
COMMD1-206ENST00000458337 CD2APQ9Y5K6 639 aa17.58■□□□□ 0.4
COMMD1-206ENST00000458337 USP16Q9Y5T5 823 aa17.58■□□□□ 0.4
COMMD1-206ENST00000458337 SNRPA1P09661 255 aaKnown RBP17.57■□□□□ 0.4
COMMD1-206ENST00000458337 CCDC146Q8IYE0 955 aa17.57■□□□□ 0.4
COMMD1-206ENST00000458337 THUMPD2Q9BTF0 503 aaKnown RBP17.57■□□□□ 0.4
COMMD1-206ENST00000458337 MIS18AQ9NYP9 233 aa17.57■□□□□ 0.4
COMMD1-206ENST00000458337 MMP10P09238 476 aa17.56■□□□□ 0.4
COMMD1-206ENST00000458337 LMOD3Q0VAK6 560 aa17.56■□□□□ 0.4
COMMD1-206ENST00000458337 CCDC184Q52MB2 194 aa17.56■□□□□ 0.4
COMMD1-206ENST00000458337 BABAM1Q9NWV8 329 aa17.56■□□□□ 0.4
COMMD1-206ENST00000458337 SRP68Q9UHB9 627 aaKnown RBP17.56■□□□□ 0.4
COMMD1-206ENST00000458337 NARFQ9UHQ1 456 aa17.56■□□□□ 0.4
COMMD1-206ENST00000458337 C4AP0C0L4 1744 aa17.55■□□□□ 0.4
COMMD1-206ENST00000458337 DCAF8L1A6NGE4 600 aa17.55■□□□□ 0.4
COMMD1-206ENST00000458337 ANP32CO43423 234 aa17.55■□□□□ 0.4
COMMD1-206ENST00000458337 CANXP27824 592 aaKnown RBP17.55■□□□□ 0.4
COMMD1-206ENST00000458337 IL6STP40189 918 aaPredicted RBP17.55■□□□□ 0.4
COMMD1-206ENST00000458337 TRIM35Q9UPQ4 493 aa17.55■□□□□ 0.4
COMMD1-206ENST00000458337 PRAMEF22A3QJZ6 481 aa17.54■□□□□ 0.4
COMMD1-206ENST00000458337 ZPR1O75312 459 aa17.54■□□□□ 0.4
COMMD1-206ENST00000458337 A1BGP04217 495 aa17.54■□□□□ 0.4
COMMD1-206ENST00000458337 TM4SF1P30408 202 aa17.54■□□□□ 0.4
COMMD1-206ENST00000458337 EIF4A1P60842 406 aaKnown RBP17.54■□□□□ 0.4
COMMD1-206ENST00000458337 FKBP8Q14318 412 aa17.54■□□□□ 0.4
COMMD1-206ENST00000458337 NLGN2Q8NFZ4 835 aa17.54■□□□□ 0.4
COMMD1-206ENST00000458337 COL15A1P39059 1388 aa17.53■□□□□ 0.4
COMMD1-206ENST00000458337 A0A087WZG4 1122 aa17.53■□□□□ 0.4
COMMD1-206ENST00000458337 USPL1Q5W0Q7 1092 aa17.53■□□□□ 0.4
COMMD1-206ENST00000458337 RRP7AQ9Y3A4 280 aaKnown RBP17.53■□□□□ 0.4
COMMD1-206ENST00000458337 GIGYF1O75420 1035 aaPredicted RBP17.52■□□□□ 0.4
COMMD1-206ENST00000458337 KLHL34Q8N239 644 aa17.52■□□□□ 0.4
COMMD1-206ENST00000458337 BCL2L12Q9HB09 334 aa17.52■□□□□ 0.4
COMMD1-206ENST00000458337 KDM3BQ7LBC6 1761 aa17.51■□□□□ 0.39
COMMD1-206ENST00000458337 NEUROD2Q15784 382 aa17.51■□□□□ 0.39
COMMD1-206ENST00000458337 CHL1O00533 1208 aa17.5■□□□□ 0.39
COMMD1-206ENST00000458337 PARP3Q9Y6F1 533 aa17.5■□□□□ 0.39
COMMD1-206ENST00000458337 NBPF26B4DH59 902 aa17.49■□□□□ 0.39
COMMD1-206ENST00000458337 APAF1O14727 1248 aa17.49■□□□□ 0.39
COMMD1-206ENST00000458337 DDR1Q08345 913 aa17.49■□□□□ 0.39
COMMD1-206ENST00000458337 NBPF10Q6P3W6 841 aaKnown RBP17.49■□□□□ 0.39
COMMD1-206ENST00000458337 NBPF15Q8N660 670 aa17.49■□□□□ 0.39
COMMD1-206ENST00000458337 TSPYL4Q9UJ04 414 aa17.49■□□□□ 0.39
COMMD1-206ENST00000458337 POLRMTO00411 1230 aaKnown RBP17.48■□□□□ 0.39
COMMD1-206ENST00000458337 TGFB2P61812 414 aa17.48■□□□□ 0.39
COMMD1-206ENST00000458337 UTRNP46939 3433 aa17.48■□□□□ 0.39
COMMD1-206ENST00000458337 KIF13BQ9NQT8 1826 aa17.47■□□□□ 0.39
COMMD1-206ENST00000458337 NFIXQ14938 502 aa17.47■□□□□ 0.39
COMMD1-206ENST00000458337 GPR162Q16538 588 aa17.47■□□□□ 0.39
COMMD1-206ENST00000458337 TBC1D2BQ9UPU7 963 aa17.47■□□□□ 0.39
COMMD1-206ENST00000458337 GOLGB1Q14789 3259 aaKnown RBP17.46■□□□□ 0.39
COMMD1-206ENST00000458337 CAMTA2O94983 1202 aa17.46■□□□□ 0.39
COMMD1-206ENST00000458337 MRS2Q9HD23 443 aa17.46■□□□□ 0.39
COMMD1-206ENST00000458337 RGL2O15211 777 aa17.45■□□□□ 0.38
COMMD1-206ENST00000458337 PIP4K2AP48426 406 aaPredicted RBP17.45■□□□□ 0.38
COMMD1-206ENST00000458337 NPM2Q86SE8 214 aaKnown RBP17.45■□□□□ 0.38
COMMD1-206ENST00000458337 C10orf71Q711Q0 1435 aa17.45■□□□□ 0.38
COMMD1-206ENST00000458337 ZNF853P0CG23 659 aa17.44■□□□□ 0.38
COMMD1-206ENST00000458337 YBX3P16989 372 aaKnown RBP eCLIP17.44■□□□□ 0.38
COMMD1-206ENST00000458337 NCBP3Q53F19 620 aaKnown RBP17.44■□□□□ 0.38
COMMD1-206ENST00000458337 CLEC4GQ6UXB4 293 aa17.44■□□□□ 0.38
COMMD1-206ENST00000458337 DZIP3Q86Y13 1208 aaKnown RBP17.44■□□□□ 0.38
COMMD1-206ENST00000458337 CFAP44Q96MT7 982 aa17.44■□□□□ 0.38
COMMD1-206ENST00000458337 ZNF330Q9Y3S2 320 aaPredicted RBP17.43■□□□□ 0.38
COMMD1-206ENST00000458337 ERBB4Q15303 1308 aa17.43■□□□□ 0.38
COMMD1-206ENST00000458337 GRIN3BO60391 1043 aa17.42■□□□□ 0.38
COMMD1-206ENST00000458337 SERPINB2P05120 415 aa17.42■□□□□ 0.38
COMMD1-206ENST00000458337 KCNA3P22001 575 aa17.42■□□□□ 0.38
COMMD1-206ENST00000458337 CCDC27Q2M243 656 aa17.42■□□□□ 0.38
COMMD1-206ENST00000458337 TBC1D9BQ66K14 1250 aa17.42■□□□□ 0.38
COMMD1-206ENST00000458337 LAMB4A4D0S4 1761 aa17.42■□□□□ 0.38
COMMD1-206ENST00000458337 A0A0G2JLW4 131 aa17.41■□□□□ 0.38
COMMD1-206ENST00000458337 CALD1Q05682 793 aaKnown RBP17.41■□□□□ 0.38
COMMD1-206ENST00000458337 PDIA6Q15084 440 aa17.41■□□□□ 0.38
COMMD1-206ENST00000458337 PXDNLA1KZ92 1463 aa17.41■□□□□ 0.38
COMMD1-206ENST00000458337 KIAA1551Q9HCM1 1747 aa17.41■□□□□ 0.38
COMMD1-206ENST00000458337 NRXN2Q9P2S2 1712 aa17.41■□□□□ 0.38
COMMD1-206ENST00000458337 AFDNP55196 1824 aaKnown RBP17.4■□□□□ 0.38
COMMD1-206ENST00000458337 LRP10Q7Z4F1 713 aa17.4■□□□□ 0.38
COMMD1-206ENST00000458337 LAS1LQ9Y4W2 734 aaKnown RBP17.4■□□□□ 0.38
COMMD1-206ENST00000458337 CHD4Q14839 1912 aa17.39■□□□□ 0.37
COMMD1-206ENST00000458337 ERVV-1B6SEH8 477 aa17.39■□□□□ 0.37
COMMD1-206ENST00000458337 DPEP1P16444 411 aa17.39■□□□□ 0.37
COMMD1-206ENST00000458337 PELP1Q8IZL8 1130 aaKnown RBP17.39■□□□□ 0.37
COMMD1-206ENST00000458337 IFT57Q9NWB7 429 aa17.39■□□□□ 0.37
COMMD1-206ENST00000458337 SCN7AQ01118 1682 aa17.39■□□□□ 0.37
COMMD1-206ENST00000458337 HOXB7P09629 217 aa17.38■□□□□ 0.37
COMMD1-206ENST00000458337 YY1P25490 414 aa17.38■□□□□ 0.37
COMMD1-206ENST00000458337 GNAI1P63096 354 aa17.38■□□□□ 0.37
COMMD1-206ENST00000458337 BICDL1Q6ZP65 573 aa17.38■□□□□ 0.37
COMMD1-206ENST00000458337 SETDB2Q96T68 719 aa17.38■□□□□ 0.37
COMMD1-206ENST00000458337 MBIPQ9NS73 344 aa17.38■□□□□ 0.37
COMMD1-206ENST00000458337 EIF2S2P20042 333 aaKnown RBP17.37■□□□□ 0.37
COMMD1-206ENST00000458337 HLFQ16534 295 aa17.37■□□□□ 0.37
COMMD1-206ENST00000458337 KRT24Q2M2I5 525 aa17.37■□□□□ 0.37
COMMD1-206ENST00000458337 WWC1Q8IX03 1113 aa17.37■□□□□ 0.37
COMMD1-206ENST00000458337 ZNF652Q9Y2D9 606 aa17.37■□□□□ 0.37
COMMD1-206ENST00000458337 BCORQ6W2J9 1755 aa17.37■□□□□ 0.37
COMMD1-206ENST00000458337 N4BP2Q86UW6 1770 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms