RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 MYL6BP14649 208 aa11.21□□□□□ -0.61
CLTCL1-204ENST00000458188 VSIG10Q8N0Z9 540 aa11.21□□□□□ -0.61
CLTCL1-204ENST00000458188 ZNF330Q9Y3S2 320 aaPredicted RBP11.21□□□□□ -0.61
CLTCL1-204ENST00000458188 KAT6BQ8WYB5 2073 aa11.21□□□□□ -0.62
CLTCL1-204ENST00000458188 UTRNP46939 3433 aa11.2□□□□□ -0.62
CLTCL1-204ENST00000458188 CRKLP46109 303 aaKnown RBP11.2□□□□□ -0.62
CLTCL1-204ENST00000458188 PROSER3Q2NL68 480 aa11.2□□□□□ -0.62
CLTCL1-204ENST00000458188 SLC27A3Q5K4L6 730 aa11.2□□□□□ -0.62
CLTCL1-204ENST00000458188 HDGFL1Q5TGJ6 251 aa11.2□□□□□ -0.62
CLTCL1-204ENST00000458188 INTS5Q6P9B9 1019 aaKnown RBP11.2□□□□□ -0.62
CLTCL1-204ENST00000458188 AMIGO3Q86WK7 504 aa11.2□□□□□ -0.62
CLTCL1-204ENST00000458188 ARXQ96QS3 562 aa11.2□□□□□ -0.62
CLTCL1-204ENST00000458188 SYT17Q9BSW7 474 aa11.2□□□□□ -0.62
CLTCL1-204ENST00000458188 BCL2L13Q9BXK5 485 aa11.2□□□□□ -0.62
CLTCL1-204ENST00000458188 BTAF1O14981 1849 aa11.19□□□□□ -0.62
CLTCL1-204ENST00000458188 ITGB4P16144 1822 aa11.19□□□□□ -0.62
CLTCL1-204ENST00000458188 NBPF26B4DH59 902 aa11.19□□□□□ -0.62
CLTCL1-204ENST00000458188 PHF14O94880 888 aa11.19□□□□□ -0.62
CLTCL1-204ENST00000458188 ZBTB7AO95365 584 aa11.19□□□□□ -0.62
CLTCL1-204ENST00000458188 STARD3NLO95772 234 aa11.19□□□□□ -0.62
CLTCL1-204ENST00000458188 ZNF827Q17R98 1081 aa11.19□□□□□ -0.62
CLTCL1-204ENST00000458188 NBPF10Q6P3W6 841 aaKnown RBP11.19□□□□□ -0.62
CLTCL1-204ENST00000458188 NBPF15Q8N660 670 aa11.19□□□□□ -0.62
CLTCL1-204ENST00000458188 TEX13AQ9BXU3 409 aaPredicted RBP11.19□□□□□ -0.62
CLTCL1-204ENST00000458188 CHPF2Q9P2E5 772 aa11.19□□□□□ -0.62
CLTCL1-204ENST00000458188 ATF5Q9Y2D1 282 aaPredicted RBP11.19□□□□□ -0.62
CLTCL1-204ENST00000458188 ZBTB1Q9Y2K1 713 aa11.19□□□□□ -0.62
CLTCL1-204ENST00000458188 GNPATO15228 680 aa11.18□□□□□ -0.62
CLTCL1-204ENST00000458188 AK7Q96M32 723 aa11.18□□□□□ -0.62
CLTCL1-204ENST00000458188 FHDC1Q9C0D6 1143 aaPredicted RBP11.18□□□□□ -0.62
CLTCL1-204ENST00000458188 ANO8Q9HCE9 1232 aaPredicted RBP11.18□□□□□ -0.62
CLTCL1-204ENST00000458188 CCDC87Q9NVE4 849 aa11.18□□□□□ -0.62
CLTCL1-204ENST00000458188 SBF2Q86WG5 1849 aa11.18□□□□□ -0.62
CLTCL1-204ENST00000458188 SLC4A2P04920 1241 aa11.17□□□□□ -0.62
CLTCL1-204ENST00000458188 AIMP1Q12904 312 aaKnown RBP11.17□□□□□ -0.62
CLTCL1-204ENST00000458188 PDIA6Q15084 440 aa11.17□□□□□ -0.62
CLTCL1-204ENST00000458188 G2E3Q7L622 706 aa11.17□□□□□ -0.62
CLTCL1-204ENST00000458188 PHAXQ9H814 394 aaKnown RBP11.17□□□□□ -0.62
CLTCL1-204ENST00000458188 TFCP2L1Q9NZI6 479 aa11.17□□□□□ -0.62
CLTCL1-204ENST00000458188 SIPA1L3O60292 1781 aaPredicted RBP11.16□□□□□ -0.62
CLTCL1-204ENST00000458188 MSH5O43196 834 aa11.16□□□□□ -0.62
CLTCL1-204ENST00000458188 BCAR3O75815 825 aa11.16□□□□□ -0.62
CLTCL1-204ENST00000458188 PTGER2P43116 358 aa11.16□□□□□ -0.62
CLTCL1-204ENST00000458188 GPR162Q16538 588 aa11.16□□□□□ -0.62
CLTCL1-204ENST00000458188 CCDC30Q5VVM6 783 aa11.16□□□□□ -0.62
CLTCL1-204ENST00000458188 SSH1Q8WYL5 1049 aa11.16□□□□□ -0.62
CLTCL1-204ENST00000458188 AKT1S1Q96B36 256 aa11.16□□□□□ -0.62
CLTCL1-204ENST00000458188 STK32BQ9NY57 414 aa11.16□□□□□ -0.62
CLTCL1-204ENST00000458188 TBC1D2BQ9UPU7 963 aa11.16□□□□□ -0.62
CLTCL1-204ENST00000458188 RPS6KA4O75676 772 aa11.15□□□□□ -0.62
CLTCL1-204ENST00000458188 HOXB7P09629 217 aa11.15□□□□□ -0.62
CLTCL1-204ENST00000458188 SLC15A2Q16348 729 aa11.15□□□□□ -0.62
CLTCL1-204ENST00000458188 ZNF428Q96B54 188 aa11.15□□□□□ -0.62
CLTCL1-204ENST00000458188 PDGFDQ9GZP0 370 aaPredicted RBP11.15□□□□□ -0.62
CLTCL1-204ENST00000458188 RTCBQ9Y3I0 505 aaKnown RBP11.15□□□□□ -0.62
CLTCL1-204ENST00000458188 CNTNAP4Q9C0A0 1308 aa11.14□□□□□ -0.63
CLTCL1-204ENST00000458188 PAPPAQ13219 1627 aa11.14□□□□□ -0.63
CLTCL1-204ENST00000458188 KDM3BQ7LBC6 1761 aa11.14□□□□□ -0.63
CLTCL1-204ENST00000458188 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-204ENST00000458188 RARSP54136 660 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-204ENST00000458188 TRAPPC3LQ5T215 181 aa11.14□□□□□ -0.63
CLTCL1-204ENST00000458188 RC3H1Q5TC82 1133 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-204ENST00000458188 TTLL7Q6ZT98 887 aa11.14□□□□□ -0.63
CLTCL1-204ENST00000458188 COPS6Q7L5N1 327 aa11.14□□□□□ -0.63
CLTCL1-204ENST00000458188 MRPL50Q8N5N7 158 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-204ENST00000458188 XAGE3Q8WTP9 111 aa11.14□□□□□ -0.63
CLTCL1-204ENST00000458188 ARHGEF1Q92888 912 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-204ENST00000458188 STK31Q9BXU1 1019 aa11.14□□□□□ -0.63
CLTCL1-204ENST00000458188 MTFR1LQ9H019 292 aa11.14□□□□□ -0.63
CLTCL1-204ENST00000458188 DDX21Q9NR30 783 aaKnown RBP eCLIP11.14□□□□□ -0.63
CLTCL1-204ENST00000458188 SMC4Q9NTJ3 1288 aa11.14□□□□□ -0.63
CLTCL1-204ENST00000458188 DBF4Q9UBU7 674 aaPredicted RBP11.14□□□□□ -0.63
CLTCL1-204ENST00000458188 SRP68Q9UHB9 627 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-204ENST00000458188 CASZ1Q86V15 1759 aa11.13□□□□□ -0.63
CLTCL1-204ENST00000458188 EIF5P55010 431 aaKnown RBP11.13□□□□□ -0.63
CLTCL1-204ENST00000458188 LRP10Q7Z4F1 713 aa11.13□□□□□ -0.63
CLTCL1-204ENST00000458188 COL23A1Q86Y22 540 aaPredicted RBP11.13□□□□□ -0.63
CLTCL1-204ENST00000458188 FRAT1Q92837 279 aaPredicted RBP11.13□□□□□ -0.63
CLTCL1-204ENST00000458188 VIRMAQ69YN4 1812 aaKnown RBP11.13□□□□□ -0.63
CLTCL1-204ENST00000458188 SOS1Q07889 1333 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-204ENST00000458188 IL6STP40189 918 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-204ENST00000458188 NPM2Q86SE8 214 aaKnown RBP11.12□□□□□ -0.63
CLTCL1-204ENST00000458188 ZBTB3Q9H5J0 574 aa11.12□□□□□ -0.63
CLTCL1-204ENST00000458188 RCAN3Q9UKA8 241 aa11.12□□□□□ -0.63
CLTCL1-204ENST00000458188 NOB1Q9ULX3 412 aaKnown RBP11.12□□□□□ -0.63
CLTCL1-204ENST00000458188 TNNQ9UQP3 1299 aa11.12□□□□□ -0.63
CLTCL1-204ENST00000458188 RGPD3A6NKT7 1758 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-204ENST00000458188 RGPD4Q7Z3J3 1758 aa11.12□□□□□ -0.63
CLTCL1-204ENST00000458188 PNPLA7Q6ZV29 1317 aa11.11□□□□□ -0.63
CLTCL1-204ENST00000458188 PLIN1O60240 522 aa11.11□□□□□ -0.63
CLTCL1-204ENST00000458188 RFC4P35249 363 aa11.11□□□□□ -0.63
CLTCL1-204ENST00000458188 HLFQ16534 295 aa11.11□□□□□ -0.63
CLTCL1-204ENST00000458188 USPL1Q5W0Q7 1092 aa11.11□□□□□ -0.63
CLTCL1-204ENST00000458188 DZIP3Q86Y13 1208 aaKnown RBP11.11□□□□□ -0.63
CLTCL1-204ENST00000458188 HYPKQ9NX55 129 aa11.11□□□□□ -0.63
CLTCL1-204ENST00000458188 UBR2Q8IWV8 1755 aa11.11□□□□□ -0.63
CLTCL1-204ENST00000458188 TJP1Q07157 1748 aa11.1□□□□□ -0.63
CLTCL1-204ENST00000458188 F6X3S4 739 aa11.1□□□□□ -0.63
CLTCL1-204ENST00000458188 CT47B1P0C2W7 299 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-204ENST00000458188 FLIIQ13045 1269 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms