RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 TDRD12Q587J7 1177 aaKnown RBP22.85■■□□□ 1.25
SNX27-204ENST00000458013 TMC6Q7Z403 805 aa22.85■■□□□ 1.25
SNX27-204ENST00000458013 ZSWIM4Q9H7M6 989 aa22.85■■□□□ 1.25
SNX27-204ENST00000458013 SFPQP23246 707 aaKnown RBP eCLIP22.85■■□□□ 1.25
SNX27-204ENST00000458013 HSP90AA4PQ58FG1 418 aa22.85■■□□□ 1.25
SNX27-204ENST00000458013 TSG101Q99816 390 aa22.85■■□□□ 1.25
SNX27-204ENST00000458013 KIF5CO60282 957 aa22.84■■□□□ 1.25
SNX27-204ENST00000458013 SSRP1Q08945 709 aaKnown RBP22.84■■□□□ 1.25
SNX27-204ENST00000458013 SLC12A7Q9Y666 1083 aa22.84■■□□□ 1.25
SNX27-204ENST00000458013 FKBP15Q5T1M5 1219 aa22.84■■□□□ 1.25
SNX27-204ENST00000458013 GJB2P29033 226 aa22.84■■□□□ 1.25
SNX27-204ENST00000458013 GOLGA8BA8MQT2 603 aa22.84■■□□□ 1.25
SNX27-204ENST00000458013 LUZP1Q86V48 1076 aa22.84■■□□□ 1.25
SNX27-204ENST00000458013 NLRP5P59047 1200 aa22.83■■□□□ 1.25
SNX27-204ENST00000458013 ZNF830Q96NB3 372 aaPredicted RBP22.83■■□□□ 1.25
SNX27-204ENST00000458013 NUDT16Q96DE0 195 aaKnown RBP22.83■■□□□ 1.25
SNX27-204ENST00000458013 KIAA1107Q9UPP5 1409 aa22.83■■□□□ 1.25
SNX27-204ENST00000458013 SSH1Q8WYL5 1049 aa22.83■■□□□ 1.25
SNX27-204ENST00000458013 TNPO1Q92973 898 aaKnown RBP22.83■■□□□ 1.25
SNX27-204ENST00000458013 GSTTP1A0A1W2PQM5 241 aa22.83■■□□□ 1.25
SNX27-204ENST00000458013 USP8P40818 1118 aa22.83■■□□□ 1.25
SNX27-204ENST00000458013 CASKIN1Q8WXD9 1431 aa22.83■■□□□ 1.24
SNX27-204ENST00000458013 ADAMTS2O95450 1211 aa22.83■■□□□ 1.24
SNX27-204ENST00000458013 CAVIN4Q5BKX8 364 aa22.83■■□□□ 1.24
SNX27-204ENST00000458013 NME9Q86XW9 330 aa22.83■■□□□ 1.24
SNX27-204ENST00000458013 CNNM3Q8NE01 707 aa22.83■■□□□ 1.24
SNX27-204ENST00000458013 KIF1BPQ96EK5 621 aa22.83■■□□□ 1.24
SNX27-204ENST00000458013 SNRKQ9NRH2 765 aa22.83■■□□□ 1.24
SNX27-204ENST00000458013 TMOD3Q9NYL9 352 aa22.83■■□□□ 1.24
SNX27-204ENST00000458013 PRG4Q92954 1404 aaPredicted RBP22.82■■□□□ 1.24
SNX27-204ENST00000458013 GOLGA8AA7E2F4 631 aa22.82■■□□□ 1.24
SNX27-204ENST00000458013 PRPF4BQ13523 1007 aaKnown RBP22.82■■□□□ 1.24
SNX27-204ENST00000458013 RAB11FIP3O75154 756 aa22.82■■□□□ 1.24
SNX27-204ENST00000458013 U3KPZ7 1027 aaPredicted RBP22.82■■□□□ 1.24
SNX27-204ENST00000458013 FSIP1Q8NA03 581 aa22.82■■□□□ 1.24
SNX27-204ENST00000458013 ZPR1O75312 459 aa22.81■■□□□ 1.24
SNX27-204ENST00000458013 DESP17661 470 aa22.81■■□□□ 1.24
SNX27-204ENST00000458013 TTLL12Q14166 644 aaPredicted RBP22.81■■□□□ 1.24
SNX27-204ENST00000458013 SHTN1A0MZ66 631 aa22.81■■□□□ 1.24
SNX27-204ENST00000458013 ZSCAN30Q86W11 494 aa22.81■■□□□ 1.24
SNX27-204ENST00000458013 ZNF213O14771 459 aa22.81■■□□□ 1.24
SNX27-204ENST00000458013 ANO10Q9NW15 660 aa22.81■■□□□ 1.24
SNX27-204ENST00000458013 STARD3NLO95772 234 aa22.8■■□□□ 1.24
SNX27-204ENST00000458013 IFIT3O14879 490 aaKnown RBP22.8■■□□□ 1.24
SNX27-204ENST00000458013 ECM2O94769 699 aaPredicted RBP22.8■■□□□ 1.24
SNX27-204ENST00000458013 RPAP2Q8IXW5 612 aaPredicted RBP22.79■■□□□ 1.24
SNX27-204ENST00000458013 ZBTB3Q9H5J0 574 aa22.79■■□□□ 1.24
SNX27-204ENST00000458013 EMILIN1Q9Y6C2 1016 aa22.79■■□□□ 1.24
SNX27-204ENST00000458013 TMCO5BA8MYB1 307 aa22.79■■□□□ 1.24
SNX27-204ENST00000458013 ATP2C2O75185 946 aa22.79■■□□□ 1.24
SNX27-204ENST00000458013 POTEJP0CG39 1038 aa22.79■■□□□ 1.24
SNX27-204ENST00000458013 CCDC91Q7Z6B0 441 aa22.79■■□□□ 1.24
SNX27-204ENST00000458013 ZNF444Q8N0Y2 327 aaPredicted RBP22.79■■□□□ 1.24
SNX27-204ENST00000458013 RNF216Q9NWF9 866 aaPredicted RBP22.79■■□□□ 1.24
SNX27-204ENST00000458013 GOLIM4O00461 696 aa22.79■■□□□ 1.24
SNX27-204ENST00000458013 ATP5J2-PTCD1G3V325 749 aa22.79■■□□□ 1.24
SNX27-204ENST00000458013 FCHSD2O94868 740 aa22.79■■□□□ 1.24
SNX27-204ENST00000458013 GTF2F1P35269 517 aaKnown RBP eCLIP22.79■■□□□ 1.24
SNX27-204ENST00000458013 PPP1R12BO60237 982 aaPredicted RBP22.78■■□□□ 1.24
SNX27-204ENST00000458013 PAXIP1Q6ZW49 1069 aaPredicted RBP22.78■■□□□ 1.24
SNX27-204ENST00000458013 GIMAP7Q8NHV1 300 aa22.78■■□□□ 1.24
SNX27-204ENST00000458013 TRMT112Q9UI30 125 aaKnown RBP22.78■■□□□ 1.24
SNX27-204ENST00000458013 PUS7Q96PZ0 661 aaKnown RBP22.78■■□□□ 1.24
SNX27-204ENST00000458013 TNIP1Q15025 636 aa22.78■■□□□ 1.24
SNX27-204ENST00000458013 LARP1Q6PKG0 1096 aaKnown RBP22.78■■□□□ 1.24
SNX27-204ENST00000458013 PUF60Q9UHX1 559 aaKnown RBP22.77■■□□□ 1.24
SNX27-204ENST00000458013 ZHX1Q9UKY1 873 aaPredicted RBP22.77■■□□□ 1.24
SNX27-204ENST00000458013 PPP4R3BQ5MIZ7 849 aa22.77■■□□□ 1.24
SNX27-204ENST00000458013 TMOD2Q9NZR1 351 aa22.77■■□□□ 1.24
SNX27-204ENST00000458013 ARAP1Q96P48 1450 aa22.77■■□□□ 1.24
SNX27-204ENST00000458013 ZSCAN12O43309 604 aa22.77■■□□□ 1.24
SNX27-204ENST00000458013 THEMISQ8N1K5 641 aaPredicted RBP22.77■■□□□ 1.24
SNX27-204ENST00000458013 TBC1D2Q9BYX2 928 aa22.77■■□□□ 1.24
SNX27-204ENST00000458013 FAM107BQ9H098 131 aa22.77■■□□□ 1.24
SNX27-204ENST00000458013 ADCY5O95622 1261 aa22.77■■□□□ 1.23
SNX27-204ENST00000458013 TCERG1LQ5VWI1 586 aa22.77■■□□□ 1.23
SNX27-204ENST00000458013 AKAP2Q9Y2D5 859 aa22.77■■□□□ 1.23
SNX27-204ENST00000458013 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.76■■□□□ 1.23
SNX27-204ENST00000458013 MAP3K2Q9Y2U5 619 aa22.76■■□□□ 1.23
SNX27-204ENST00000458013 RARSP54136 660 aaKnown RBP22.76■■□□□ 1.23
SNX27-204ENST00000458013 MTIF2P46199 727 aaKnown RBP22.76■■□□□ 1.23
SNX27-204ENST00000458013 NF2P35240 595 aa22.76■■□□□ 1.23
SNX27-204ENST00000458013 GPATCH11Q8N954 259 aa22.76■■□□□ 1.23
SNX27-204ENST00000458013 LRRC2Q9BYS8 371 aa22.76■■□□□ 1.23
SNX27-204ENST00000458013 FAM83GA6ND36 823 aa22.76■■□□□ 1.23
SNX27-204ENST00000458013 HLTFQ14527 1009 aaKnown RBP eCLIP22.76■■□□□ 1.23
SNX27-204ENST00000458013 GLRX3O76003 335 aaKnown RBP22.75■■□□□ 1.23
SNX27-204ENST00000458013 STAC3Q96MF2 364 aa22.75■■□□□ 1.23
SNX27-204ENST00000458013 IFIT5Q13325 482 aaKnown RBP22.75■■□□□ 1.23
SNX27-204ENST00000458013 KIF18AQ8NI77 898 aa22.75■■□□□ 1.23
SNX27-204ENST00000458013 FBLN1P23142 703 aa22.75■■□□□ 1.23
SNX27-204ENST00000458013 CTCFLQ8NI51 663 aaPredicted RBP22.75■■□□□ 1.23
SNX27-204ENST00000458013 ERICH3Q5RHP9 1530 aa22.74■■□□□ 1.23
SNX27-204ENST00000458013 SYNJ2O15056 1496 aa22.74■■□□□ 1.23
SNX27-204ENST00000458013 CIZ1Q9ULV3 898 aaPredicted RBP22.74■■□□□ 1.23
SNX27-204ENST00000458013 CTNNA2P26232 953 aa22.74■■□□□ 1.23
SNX27-204ENST00000458013 PPP4R3AQ6IN85 833 aa22.74■■□□□ 1.23
SNX27-204ENST00000458013 MYO1BO43795 1136 aa22.73■■□□□ 1.23
SNX27-204ENST00000458013 NECAB1Q8N987 351 aa22.73■■□□□ 1.23
SNX27-204ENST00000458013 MAATS1Q7Z4T9 603 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms