RNA–Protein interactions for RNA: ENST00000456515.5

SEC22C-214, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-214ENST00000456515 LY75O60449 1722 aa9.65□□□□□ -0.86
SEC22C-214ENST00000456515 PAPPAQ13219 1627 aa9.65□□□□□ -0.86
SEC22C-214ENST00000456515 CHL1O00533 1208 aa9.65□□□□□ -0.86
SEC22C-214ENST00000456515 SNRPA1P09661 255 aaKnown RBP9.65□□□□□ -0.86
SEC22C-214ENST00000456515 CACNB1Q02641 598 aaPredicted RBP9.65□□□□□ -0.86
SEC22C-214ENST00000456515 FLAD1Q8NFF5 587 aa9.65□□□□□ -0.86
SEC22C-214ENST00000456515 AK7Q96M32 723 aa9.65□□□□□ -0.86
SEC22C-214ENST00000456515 HEG1Q9ULI3 1381 aa9.64□□□□□ -0.87
SEC22C-214ENST00000456515 YY1P25490 414 aa9.64□□□□□ -0.87
SEC22C-214ENST00000456515 HNRNPUQ00839 825 aaKnown RBP eCLIP9.64□□□□□ -0.87
SEC22C-214ENST00000456515 COL23A1Q86Y22 540 aaPredicted RBP9.64□□□□□ -0.87
SEC22C-214ENST00000456515 ZNF496Q96IT1 587 aaPredicted RBP9.64□□□□□ -0.87
SEC22C-214ENST00000456515 MIS18AQ9NYP9 233 aa9.64□□□□□ -0.87
SEC22C-214ENST00000456515 SENP3-EIF4A1A0A087X0R7 540 aa9.63□□□□□ -0.87
SEC22C-214ENST00000456515 EIF4A1P60842 406 aaKnown RBP9.63□□□□□ -0.87
SEC22C-214ENST00000456515 GOLGA2Q08379 1002 aa9.63□□□□□ -0.87
SEC22C-214ENST00000456515 RC3H1Q5TC82 1133 aaKnown RBP9.63□□□□□ -0.87
SEC22C-214ENST00000456515 ZNF831Q5JPB2 1677 aa9.63□□□□□ -0.87
SEC22C-214ENST00000456515 QSER1Q2KHR3 1735 aa9.62□□□□□ -0.87
SEC22C-214ENST00000456515 SOS1Q07889 1333 aaPredicted RBP9.62□□□□□ -0.87
SEC22C-214ENST00000456515 CNTNAP4Q9C0A0 1308 aa9.62□□□□□ -0.87
SEC22C-214ENST00000456515 E9PSI1 815 aa9.62□□□□□ -0.87
SEC22C-214ENST00000456515 ZNF853P0CG23 659 aa9.62□□□□□ -0.87
SEC22C-214ENST00000456515 POLD1P28340 1107 aa9.62□□□□□ -0.87
SEC22C-214ENST00000456515 DNAJC10Q8IXB1 793 aa9.62□□□□□ -0.87
SEC22C-214ENST00000456515 RTCBQ9Y3I0 505 aaKnown RBP9.62□□□□□ -0.87
SEC22C-214ENST00000456515 KCPQ6ZWJ8 1503 aa9.61□□□□□ -0.87
SEC22C-214ENST00000456515 KDM3BQ7LBC6 1761 aa9.61□□□□□ -0.87
SEC22C-214ENST00000456515 UBR2Q8IWV8 1755 aa9.61□□□□□ -0.87
SEC22C-214ENST00000456515 GNPATO15228 680 aa9.61□□□□□ -0.87
SEC22C-214ENST00000456515 KCNQ3O43525 872 aa9.61□□□□□ -0.87
SEC22C-214ENST00000456515 GIGYF1O75420 1035 aaPredicted RBP9.61□□□□□ -0.87
SEC22C-214ENST00000456515 HOXB7P09629 217 aa9.61□□□□□ -0.87
SEC22C-214ENST00000456515 ITPK1Q13572 414 aa9.61□□□□□ -0.87
SEC22C-214ENST00000456515 LINC00116Q8NCU8 138 aa9.61□□□□□ -0.87
SEC22C-214ENST00000456515 MBIPQ9NS73 344 aa9.61□□□□□ -0.87
SEC22C-214ENST00000456515 CCDC87Q9NVE4 849 aa9.61□□□□□ -0.87
SEC22C-214ENST00000456515 UTRNP46939 3433 aa9.61□□□□□ -0.87
SEC22C-214ENST00000456515 C5P01031 1676 aa9.61□□□□□ -0.87
SEC22C-214ENST00000456515 TAF1LQ8IZX4 1826 aa9.61□□□□□ -0.87
SEC22C-214ENST00000456515 TUBGCP6Q96RT7 1819 aa9.61□□□□□ -0.87
SEC22C-214ENST00000456515 COL24A1Q17RW2 1714 aa9.6□□□□□ -0.87
SEC22C-214ENST00000456515 A0A087WZG4 1122 aa9.6□□□□□ -0.87
SEC22C-214ENST00000456515 RPS6KA4O75676 772 aa9.6□□□□□ -0.87
SEC22C-214ENST00000456515 CYP19A1P11511 503 aaPredicted RBP9.6□□□□□ -0.87
SEC22C-214ENST00000456515 SSFA2P28290 1259 aa9.6□□□□□ -0.87
SEC22C-214ENST00000456515 CRKLP46109 303 aaKnown RBP9.6□□□□□ -0.87
SEC22C-214ENST00000456515 TRAPPC3LQ5T215 181 aa9.6□□□□□ -0.87
SEC22C-214ENST00000456515 SLC4A9Q96Q91 983 aa9.6□□□□□ -0.87
SEC22C-214ENST00000456515 C4BP0C0L5 1744 aa9.59□□□□□ -0.87
SEC22C-214ENST00000456515 ERBB4Q15303 1308 aa9.59□□□□□ -0.87
SEC22C-214ENST00000456515 DUSP27Q5VZP5 1158 aa9.59□□□□□ -0.87
SEC22C-214ENST00000456515 AMIGO3Q86WK7 504 aa9.59□□□□□ -0.87
SEC22C-214ENST00000456515 TSR2Q969E8 191 aaKnown RBP9.59□□□□□ -0.87
SEC22C-214ENST00000456515 CICQ96RK0 1608 aaPredicted RBP9.59□□□□□ -0.87
SEC22C-214ENST00000456515 ZNF521Q96K83 1311 aa9.58□□□□□ -0.88
SEC22C-214ENST00000456515 ATXN8OSP0DMR3 200 aa9.58□□□□□ -0.88
SEC22C-214ENST00000456515 EIF2S2P20042 333 aaKnown RBP9.58□□□□□ -0.88
SEC22C-214ENST00000456515 CANXP27824 592 aaKnown RBP9.58□□□□□ -0.88
SEC22C-214ENST00000456515 RFC4P35249 363 aa9.58□□□□□ -0.88
SEC22C-214ENST00000456515 IL6STP40189 918 aaPredicted RBP9.58□□□□□ -0.88
SEC22C-214ENST00000456515 GPR162Q16538 588 aa9.58□□□□□ -0.88
SEC22C-214ENST00000456515 HDGFL1Q5TGJ6 251 aa9.58□□□□□ -0.88
SEC22C-214ENST00000456515 CCDC30Q5VVM6 783 aa9.58□□□□□ -0.88
SEC22C-214ENST00000456515 SMIM5Q71RC9 77 aa9.58□□□□□ -0.88
SEC22C-214ENST00000456515 STK31Q9BXU1 1019 aa9.58□□□□□ -0.88
SEC22C-214ENST00000456515 ZNF330Q9Y3S2 320 aaPredicted RBP9.58□□□□□ -0.88
SEC22C-214ENST00000456515 USP16Q9Y5T5 823 aa9.58□□□□□ -0.88
SEC22C-214ENST00000456515 COL5A3P25940 1745 aaPredicted RBP9.58□□□□□ -0.88
SEC22C-214ENST00000456515 CHD4Q14839 1912 aa9.58□□□□□ -0.88
SEC22C-214ENST00000456515 ZBED9Q6R2W3 1325 aa9.57□□□□□ -0.88
SEC22C-214ENST00000456515 FANCIQ9NVI1 1328 aa9.57□□□□□ -0.88
SEC22C-214ENST00000456515 TJP1Q07157 1748 aa9.57□□□□□ -0.88
SEC22C-214ENST00000456515 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.57□□□□□ -0.88
SEC22C-214ENST00000456515 ZPR1O75312 459 aa9.57□□□□□ -0.88
SEC22C-214ENST00000456515 PHF14O94880 888 aa9.57□□□□□ -0.88
SEC22C-214ENST00000456515 SLFN5Q08AF3 891 aa9.57□□□□□ -0.88
SEC22C-214ENST00000456515 TWISTNBQ3B726 338 aaPredicted RBP9.57□□□□□ -0.88
SEC22C-214ENST00000456515 MSL1Q68DK7 614 aa9.57□□□□□ -0.88
SEC22C-214ENST00000456515 INTS5Q6P9B9 1019 aaKnown RBP9.57□□□□□ -0.88
SEC22C-214ENST00000456515 KLHL34Q8N239 644 aa9.57□□□□□ -0.88
SEC22C-214ENST00000456515 DBF4Q9UBU7 674 aaPredicted RBP9.57□□□□□ -0.88
SEC22C-214ENST00000456515 LAMB4A4D0S4 1761 aa9.56□□□□□ -0.88
SEC22C-214ENST00000456515 ELL2O00472 640 aaPredicted RBP9.56□□□□□ -0.88
SEC22C-214ENST00000456515 A1BGP04217 495 aa9.56□□□□□ -0.88
SEC22C-214ENST00000456515 EXOSC9Q06265 439 aaKnown RBP9.56□□□□□ -0.88
SEC22C-214ENST00000456515 NLGN2Q8NFZ4 835 aa9.56□□□□□ -0.88
SEC22C-214ENST00000456515 ZNF428Q96B54 188 aa9.56□□□□□ -0.88
SEC22C-214ENST00000456515 HYPKQ9NX55 129 aa9.56□□□□□ -0.88
SEC22C-214ENST00000456515 ZBTB1Q9Y2K1 713 aa9.56□□□□□ -0.88
SEC22C-214ENST00000456515 GOLGB1Q14789 3259 aaKnown RBP9.56□□□□□ -0.88
SEC22C-214ENST00000456515 PRAMEF22A3QJZ6 481 aa9.55□□□□□ -0.88
SEC22C-214ENST00000456515 CT47B1P0C2W7 299 aaPredicted RBP9.55□□□□□ -0.88
SEC22C-214ENST00000456515 EIF5P55010 431 aaKnown RBP9.55□□□□□ -0.88
SEC22C-214ENST00000456515 KIF6Q6ZMV9 814 aa9.55□□□□□ -0.88
SEC22C-214ENST00000456515 C8orf58Q8NAV2 365 aa9.55□□□□□ -0.88
SEC22C-214ENST00000456515 NECTIN2Q92692 538 aa9.55□□□□□ -0.88
SEC22C-214ENST00000456515 ARHGEF1Q92888 912 aaKnown RBP9.55□□□□□ -0.88
SEC22C-214ENST00000456515 DDX21Q9NR30 783 aaKnown RBP eCLIP9.55□□□□□ -0.88
SEC22C-214ENST00000456515 ZNF652Q9Y2D9 606 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms