RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 SOS1Q07889 1333 aaPredicted RBP13.84□□□□□ -0.19
SYPL1-202ENST00000455385 NBPF26B4DH59 902 aa13.83□□□□□ -0.19
SYPL1-202ENST00000455385 RARSP54136 660 aaKnown RBP13.83□□□□□ -0.19
SYPL1-202ENST00000455385 NBPF14Q5TI25 921 aa13.83□□□□□ -0.19
SYPL1-202ENST00000455385 NBPF10Q6P3W6 841 aaKnown RBP13.83□□□□□ -0.19
SYPL1-202ENST00000455385 NBPF15Q8N660 670 aa13.83□□□□□ -0.19
SYPL1-202ENST00000455385 SSH1Q8WYL5 1049 aa13.83□□□□□ -0.19
SYPL1-202ENST00000455385 STARD3NLO95772 234 aa13.83□□□□□ -0.2
SYPL1-202ENST00000455385 ANXA1P04083 346 aa13.83□□□□□ -0.2
SYPL1-202ENST00000455385 BAG6P46379 1132 aa13.83□□□□□ -0.2
SYPL1-202ENST00000455385 PROSER3Q2NL68 480 aa13.83□□□□□ -0.2
SYPL1-202ENST00000455385 INTS5Q6P9B9 1019 aaKnown RBP13.83□□□□□ -0.2
SYPL1-202ENST00000455385 MYH14Q7Z406 1995 aaKnown RBP13.82□□□□□ -0.2
SYPL1-202ENST00000455385 CRKLP46109 303 aaKnown RBP13.82□□□□□ -0.2
SYPL1-202ENST00000455385 CCDC30Q5VVM6 783 aa13.82□□□□□ -0.2
SYPL1-202ENST00000455385 BCL2L13Q9BXK5 485 aa13.82□□□□□ -0.2
SYPL1-202ENST00000455385 CHPF2Q9P2E5 772 aa13.82□□□□□ -0.2
SYPL1-202ENST00000455385 BCAR3O75815 825 aa13.82□□□□□ -0.2
SYPL1-202ENST00000455385 CICQ96RK0 1608 aaPredicted RBP13.82□□□□□ -0.2
SYPL1-202ENST00000455385 TAF1LQ8IZX4 1826 aa13.81□□□□□ -0.2
SYPL1-202ENST00000455385 LRP10Q7Z4F1 713 aa13.81□□□□□ -0.2
SYPL1-202ENST00000455385 ZNF428Q96B54 188 aa13.81□□□□□ -0.2
SYPL1-202ENST00000455385 RCAN3Q9UKA8 241 aa13.81□□□□□ -0.2
SYPL1-202ENST00000455385 ZBTB1Q9Y2K1 713 aa13.81□□□□□ -0.2
SYPL1-202ENST00000455385 COL5A3P25940 1745 aaPredicted RBP13.81□□□□□ -0.2
SYPL1-202ENST00000455385 LAMB4A4D0S4 1761 aa13.81□□□□□ -0.2
SYPL1-202ENST00000455385 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
SYPL1-202ENST00000455385 SMIM5Q71RC9 77 aa13.81□□□□□ -0.2
SYPL1-202ENST00000455385 RGPD3A6NKT7 1758 aaPredicted RBP13.8□□□□□ -0.2
SYPL1-202ENST00000455385 RGPD4Q7Z3J3 1758 aa13.8□□□□□ -0.2
SYPL1-202ENST00000455385 MYL6BP14649 208 aa13.8□□□□□ -0.2
SYPL1-202ENST00000455385 CANXP27824 592 aaKnown RBP13.8□□□□□ -0.2
SYPL1-202ENST00000455385 G2E3Q7L622 706 aa13.8□□□□□ -0.2
SYPL1-202ENST00000455385 AMIGO3Q86WK7 504 aa13.8□□□□□ -0.2
SYPL1-202ENST00000455385 MRPL50Q8N5N7 158 aaKnown RBP13.8□□□□□ -0.2
SYPL1-202ENST00000455385 DDX21Q9NR30 783 aaKnown RBP eCLIP13.8□□□□□ -0.2
SYPL1-202ENST00000455385 CCDC87Q9NVE4 849 aa13.8□□□□□ -0.2
SYPL1-202ENST00000455385 DBF4Q9UBU7 674 aaPredicted RBP13.8□□□□□ -0.2
SYPL1-202ENST00000455385 ALDH1L2Q3SY69 923 aa13.79□□□□□ -0.2
SYPL1-202ENST00000455385 RC3H1Q5TC82 1133 aaKnown RBP13.79□□□□□ -0.2
SYPL1-202ENST00000455385 PHAXQ9H814 394 aaKnown RBP13.79□□□□□ -0.2
SYPL1-202ENST00000455385 SMC4Q9NTJ3 1288 aa13.79□□□□□ -0.2
SYPL1-202ENST00000455385 CNTNAP4Q9C0A0 1308 aa13.79□□□□□ -0.2
SYPL1-202ENST00000455385 STK31Q9BXU1 1019 aa13.78□□□□□ -0.2
SYPL1-202ENST00000455385 ZNF827Q17R98 1081 aa13.78□□□□□ -0.2
SYPL1-202ENST00000455385 CHMP4AQ9BY43 222 aa13.78□□□□□ -0.2
SYPL1-202ENST00000455385 ERBB4Q15303 1308 aa13.78□□□□□ -0.2
SYPL1-202ENST00000455385 C4BP0C0L5 1744 aa13.77□□□□□ -0.2
SYPL1-202ENST00000455385 EIF5P55010 431 aaKnown RBP13.77□□□□□ -0.21
SYPL1-202ENST00000455385 BRPF1P55201 1214 aaPredicted RBP13.77□□□□□ -0.21
SYPL1-202ENST00000455385 AKT1S1Q96B36 256 aa13.77□□□□□ -0.21
SYPL1-202ENST00000455385 RREB1Q92766 1687 aa13.77□□□□□ -0.21
SYPL1-202ENST00000455385 GNPATO15228 680 aa13.76□□□□□ -0.21
SYPL1-202ENST00000455385 RPS6KA4O75676 772 aa13.76□□□□□ -0.21
SYPL1-202ENST00000455385 ANO8Q9HCE9 1232 aaPredicted RBP13.76□□□□□ -0.21
SYPL1-202ENST00000455385 HYPKQ9NX55 129 aa13.76□□□□□ -0.21
SYPL1-202ENST00000455385 IL6STP40189 918 aaPredicted RBP13.76□□□□□ -0.21
SYPL1-202ENST00000455385 COPS6Q7L5N1 327 aa13.76□□□□□ -0.21
SYPL1-202ENST00000455385 CACNA1FO60840 1977 aa13.75□□□□□ -0.21
SYPL1-202ENST00000455385 CENPBP07199 599 aaPredicted RBP13.75□□□□□ -0.21
SYPL1-202ENST00000455385 AIMP1Q12904 312 aaKnown RBP13.75□□□□□ -0.21
SYPL1-202ENST00000455385 TTLL7Q6ZT98 887 aa13.75□□□□□ -0.21
SYPL1-202ENST00000455385 XAGE3Q8WTP9 111 aa13.75□□□□□ -0.21
SYPL1-202ENST00000455385 NOB1Q9ULX3 412 aaKnown RBP13.75□□□□□ -0.21
SYPL1-202ENST00000455385 ZNF330Q9Y3S2 320 aaPredicted RBP13.75□□□□□ -0.21
SYPL1-202ENST00000455385 FLIIQ13045 1269 aa13.75□□□□□ -0.21
SYPL1-202ENST00000455385 AK7Q96M32 723 aa13.75□□□□□ -0.21
SYPL1-202ENST00000455385 PLIN1O60240 522 aa13.74□□□□□ -0.21
SYPL1-202ENST00000455385 RTCBQ9Y3I0 505 aaKnown RBP13.74□□□□□ -0.21
SYPL1-202ENST00000455385 NUP188Q5SRE5 1749 aa13.74□□□□□ -0.21
SYPL1-202ENST00000455385 FRAT1Q92837 279 aaPredicted RBP13.73□□□□□ -0.21
SYPL1-202ENST00000455385 TBC1D2BQ9UPU7 963 aa13.73□□□□□ -0.21
SYPL1-202ENST00000455385 TNNQ9UQP3 1299 aa13.73□□□□□ -0.21
SYPL1-202ENST00000455385 SUPT16HQ9Y5B9 1047 aaKnown RBP13.73□□□□□ -0.21
SYPL1-202ENST00000455385 PHF14O94880 888 aa13.73□□□□□ -0.21
SYPL1-202ENST00000455385 ARHGEF1Q92888 912 aaKnown RBP13.73□□□□□ -0.21
SYPL1-202ENST00000455385 UBR3Q6ZT12 1888 aa13.72□□□□□ -0.21
SYPL1-202ENST00000455385 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.72□□□□□ -0.21
SYPL1-202ENST00000455385 HMGB2P26583 209 aaKnown RBP13.72□□□□□ -0.21
SYPL1-202ENST00000455385 SLC15A2Q16348 729 aa13.72□□□□□ -0.21
SYPL1-202ENST00000455385 TFCP2L1Q9NZI6 479 aa13.72□□□□□ -0.21
SYPL1-202ENST00000455385 ARXQ96QS3 562 aa13.72□□□□□ -0.21
SYPL1-202ENST00000455385 COL15A1P39059 1388 aa13.71□□□□□ -0.21
SYPL1-202ENST00000455385 PI4KAP2A4QPH2 592 aa13.71□□□□□ -0.21
SYPL1-202ENST00000455385 F6X3S4 739 aa13.71□□□□□ -0.21
SYPL1-202ENST00000455385 FKBP5Q13451 457 aaPredicted RBP13.71□□□□□ -0.21
SYPL1-202ENST00000455385 TRAPPC3LQ5T215 181 aa13.71□□□□□ -0.21
SYPL1-202ENST00000455385 ANKRD13DQ6ZTN6 518 aa13.71□□□□□ -0.21
SYPL1-202ENST00000455385 DZIP3Q86Y13 1208 aaKnown RBP13.71□□□□□ -0.21
SYPL1-202ENST00000455385 PI4KAP1Q8N8J0 262 aa13.71□□□□□ -0.21
SYPL1-202ENST00000455385 COL23A1Q86Y22 540 aaPredicted RBP13.71□□□□□ -0.22
SYPL1-202ENST00000455385 STK32BQ9NY57 414 aa13.71□□□□□ -0.22
SYPL1-202ENST00000455385 ADCY9O60503 1353 aa13.7□□□□□ -0.22
SYPL1-202ENST00000455385 RNF123Q5XPI4 1314 aa13.7□□□□□ -0.22
SYPL1-202ENST00000455385 KIF16BQ96L93 1317 aa13.7□□□□□ -0.22
SYPL1-202ENST00000455385 TRIM27P14373 513 aa13.7□□□□□ -0.22
SYPL1-202ENST00000455385 SSFA2P28290 1259 aa13.7□□□□□ -0.22
SYPL1-202ENST00000455385 HLFQ16534 295 aa13.7□□□□□ -0.22
SYPL1-202ENST00000455385 KSR2Q6VAB6 950 aa13.7□□□□□ -0.22
SYPL1-202ENST00000455385 ARHGAP45Q92619 1136 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms