RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 PRAMEF22A3QJZ6 481 aa16.37■□□□□ 0.21
CSNK1E-211ENST00000451964 NEFMP07197 916 aa16.37■□□□□ 0.21
CSNK1E-211ENST00000451964 TAF7Q15545 349 aaPredicted RBP16.37■□□□□ 0.21
CSNK1E-211ENST00000451964 USPL1Q5W0Q7 1092 aa16.37■□□□□ 0.21
CSNK1E-211ENST00000451964 THUMPD2Q9BTF0 503 aaKnown RBP16.37■□□□□ 0.21
CSNK1E-211ENST00000451964 A1BGP04217 495 aa16.36■□□□□ 0.21
CSNK1E-211ENST00000451964 EIF5P55010 431 aaKnown RBP16.36■□□□□ 0.21
CSNK1E-211ENST00000451964 DDR1Q08345 913 aa16.36■□□□□ 0.21
CSNK1E-211ENST00000451964 TEX13AQ9BXU3 409 aaPredicted RBP16.36■□□□□ 0.21
CSNK1E-211ENST00000451964 PNNQ9H307 717 aaKnown RBP16.36■□□□□ 0.21
CSNK1E-211ENST00000451964 BCL2L12Q9HB09 334 aa16.36■□□□□ 0.21
CSNK1E-211ENST00000451964 NARFQ9UHQ1 456 aa16.36■□□□□ 0.21
CSNK1E-211ENST00000451964 USP16Q9Y5T5 823 aa16.36■□□□□ 0.21
CSNK1E-211ENST00000451964 ZPR1O75312 459 aa16.35■□□□□ 0.21
CSNK1E-211ENST00000451964 TM4SF1P30408 202 aa16.35■□□□□ 0.21
CSNK1E-211ENST00000451964 UBR2Q8IWV8 1755 aa16.35■□□□□ 0.21
CSNK1E-211ENST00000451964 SIPA1L3O60292 1781 aaPredicted RBP16.34■□□□□ 0.21
CSNK1E-211ENST00000451964 WWC3Q9ULE0 1092 aa16.34■□□□□ 0.21
CSNK1E-211ENST00000451964 PARP3Q9Y6F1 533 aa16.34■□□□□ 0.21
CSNK1E-211ENST00000451964 MAPK8IP3Q9UPT6 1336 aa16.34■□□□□ 0.21
CSNK1E-211ENST00000451964 COL15A1P39059 1388 aa16.34■□□□□ 0.21
CSNK1E-211ENST00000451964 VIRMAQ69YN4 1812 aaKnown RBP16.33■□□□□ 0.21
CSNK1E-211ENST00000451964 POLRMTO00411 1230 aaKnown RBP16.32■□□□□ 0.2
CSNK1E-211ENST00000451964 SNRPA1P09661 255 aaKnown RBP16.32■□□□□ 0.2
CSNK1E-211ENST00000451964 IL6STP40189 918 aaPredicted RBP16.32■□□□□ 0.2
CSNK1E-211ENST00000451964 PIP4K2AP48426 406 aaPredicted RBP16.32■□□□□ 0.2
CSNK1E-211ENST00000451964 RIPK4P57078 832 aa16.32■□□□□ 0.2
CSNK1E-211ENST00000451964 CCDC146Q8IYE0 955 aa16.32■□□□□ 0.2
CSNK1E-211ENST00000451964 ADAMTS8Q9UP79 889 aa16.32■□□□□ 0.2
CSNK1E-211ENST00000451964 C4AP0C0L4 1744 aa16.31■□□□□ 0.2
CSNK1E-211ENST00000451964 C10orf71Q711Q0 1435 aa16.31■□□□□ 0.2
CSNK1E-211ENST00000451964 A0A0G2JLW4 131 aa16.31■□□□□ 0.2
CSNK1E-211ENST00000451964 GRIN3BO60391 1043 aa16.31■□□□□ 0.2
CSNK1E-211ENST00000451964 TMPOP42166 694 aaKnown RBP16.31■□□□□ 0.2
CSNK1E-211ENST00000451964 NFIXQ14938 502 aa16.31■□□□□ 0.2
CSNK1E-211ENST00000451964 TBC1D2BQ9UPU7 963 aa16.31■□□□□ 0.2
CSNK1E-211ENST00000451964 A0A087WZG4 1122 aa16.3■□□□□ 0.2
CSNK1E-211ENST00000451964 ZNF316A6NFI3 1004 aaPredicted RBP16.3■□□□□ 0.2
CSNK1E-211ENST00000451964 TGFB2P61812 414 aa16.3■□□□□ 0.2
CSNK1E-211ENST00000451964 RRP7AQ9Y3A4 280 aaKnown RBP16.3■□□□□ 0.2
CSNK1E-211ENST00000451964 ZNF330Q9Y3S2 320 aaPredicted RBP16.3■□□□□ 0.2
CSNK1E-211ENST00000451964 PXDNLA1KZ92 1463 aa16.29■□□□□ 0.2
CSNK1E-211ENST00000451964 NBPF26B4DH59 902 aa16.29■□□□□ 0.2
CSNK1E-211ENST00000451964 DPEP1P16444 411 aa16.29■□□□□ 0.2
CSNK1E-211ENST00000451964 EIF4A1P60842 406 aaKnown RBP16.29■□□□□ 0.2
CSNK1E-211ENST00000451964 WDR43Q15061 677 aaKnown RBP eCLIP16.29■□□□□ 0.2
CSNK1E-211ENST00000451964 NBPF10Q6P3W6 841 aaKnown RBP16.29■□□□□ 0.2
CSNK1E-211ENST00000451964 NBPF15Q8N660 670 aa16.29■□□□□ 0.2
CSNK1E-211ENST00000451964 PNISRQ8TF01 805 aaKnown RBP16.29■□□□□ 0.2
CSNK1E-211ENST00000451964 KCNA3P22001 575 aa16.28■□□□□ 0.2
CSNK1E-211ENST00000451964 RUNDC1Q96C34 613 aa16.28■□□□□ 0.2
CSNK1E-211ENST00000451964 GIGYF1O75420 1035 aaPredicted RBP16.27■□□□□ 0.2
CSNK1E-211ENST00000451964 CAMTA2O94983 1202 aa16.27■□□□□ 0.2
CSNK1E-211ENST00000451964 NEUROD2Q15784 382 aa16.27■□□□□ 0.2
CSNK1E-211ENST00000451964 CCDC184Q52MB2 194 aa16.27■□□□□ 0.2
CSNK1E-211ENST00000451964 TBC1D9BQ66K14 1250 aa16.27■□□□□ 0.2
CSNK1E-211ENST00000451964 SERPINB2P05120 415 aa16.26■□□□□ 0.19
CSNK1E-211ENST00000451964 BICDL1Q6ZP65 573 aa16.26■□□□□ 0.19
CSNK1E-211ENST00000451964 ZNF784Q8NCA9 323 aaPredicted RBP16.26■□□□□ 0.19
CSNK1E-211ENST00000451964 TRIM35Q9UPQ4 493 aa16.26■□□□□ 0.19
CSNK1E-211ENST00000451964 DZIP3Q86Y13 1208 aaKnown RBP16.25■□□□□ 0.19
CSNK1E-211ENST00000451964 CHRNA5P30532 468 aa16.24■□□□□ 0.19
CSNK1E-211ENST00000451964 TSPYL4Q9UJ04 414 aa16.24■□□□□ 0.19
CSNK1E-211ENST00000451964 LMOD3Q0VAK6 560 aa16.23■□□□□ 0.19
CSNK1E-211ENST00000451964 NPM2Q86SE8 214 aaKnown RBP16.23■□□□□ 0.19
CSNK1E-211ENST00000451964 BCS1LQ9Y276 419 aa16.23■□□□□ 0.19
CSNK1E-211ENST00000451964 DLG5Q8TDM6 1919 aa16.23■□□□□ 0.19
CSNK1E-211ENST00000451964 KIAA1551Q9HCM1 1747 aa16.22■□□□□ 0.19
CSNK1E-211ENST00000451964 KIF13BQ9NQT8 1826 aa16.22■□□□□ 0.19
CSNK1E-211ENST00000451964 CHL1O00533 1208 aa16.21■□□□□ 0.19
CSNK1E-211ENST00000451964 CCDC24Q8N4L8 307 aa16.21■□□□□ 0.19
CSNK1E-211ENST00000451964 BABAM1Q9NWV8 329 aa16.21■□□□□ 0.19
CSNK1E-211ENST00000451964 PIM2Q9P1W9 311 aa16.21■□□□□ 0.19
CSNK1E-211ENST00000451964 CARMIL3Q8ND23 1372 aa16.21■□□□□ 0.19
CSNK1E-211ENST00000451964 APAF1O14727 1248 aa16.2■□□□□ 0.18
CSNK1E-211ENST00000451964 PRR5LQ6MZQ0 368 aa16.2■□□□□ 0.18
CSNK1E-211ENST00000451964 HLFQ16534 295 aa16.19■□□□□ 0.18
CSNK1E-211ENST00000451964 CLEC4GQ6UXB4 293 aa16.19■□□□□ 0.18
CSNK1E-211ENST00000451964 NGEFQ8N5V2 710 aa16.19■□□□□ 0.18
CSNK1E-211ENST00000451964 SETDB2Q96T68 719 aa16.19■□□□□ 0.18
CSNK1E-211ENST00000451964 KDM3BQ7LBC6 1761 aa16.18■□□□□ 0.18
CSNK1E-211ENST00000451964 MYL6BP14649 208 aa16.18■□□□□ 0.18
CSNK1E-211ENST00000451964 KRT24Q2M2I5 525 aa16.18■□□□□ 0.18
CSNK1E-211ENST00000451964 DALRD3Q5D0E6 543 aaKnown RBP16.18■□□□□ 0.18
CSNK1E-211ENST00000451964 TTLL7Q6ZT98 887 aa16.18■□□□□ 0.18
CSNK1E-211ENST00000451964 N4BP2Q86UW6 1770 aaPredicted RBP16.18■□□□□ 0.18
CSNK1E-211ENST00000451964 PDIA6Q15084 440 aa16.17■□□□□ 0.18
CSNK1E-211ENST00000451964 ARHGAP27Q6ZUM4 889 aa16.17■□□□□ 0.18
CSNK1E-211ENST00000451964 LRP10Q7Z4F1 713 aa16.17■□□□□ 0.18
CSNK1E-211ENST00000451964 C2CD5Q86YS7 1000 aa16.17■□□□□ 0.18
CSNK1E-211ENST00000451964 LAS1LQ9Y4W2 734 aaKnown RBP16.17■□□□□ 0.18
CSNK1E-211ENST00000451964 RGL2O15211 777 aa16.16■□□□□ 0.18
CSNK1E-211ENST00000451964 EIF2S2P20042 333 aaKnown RBP16.16■□□□□ 0.18
CSNK1E-211ENST00000451964 BRIP1Q9BX63 1249 aa16.16■□□□□ 0.18
CSNK1E-211ENST00000451964 NRXN2Q9P2S2 1712 aa16.16■□□□□ 0.18
CSNK1E-211ENST00000451964 CHD4Q14839 1912 aa16.15■□□□□ 0.18
CSNK1E-211ENST00000451964 SCN7AQ01118 1682 aa16.15■□□□□ 0.18
CSNK1E-211ENST00000451964 ANP32CO43423 234 aa16.15■□□□□ 0.18
CSNK1E-211ENST00000451964 PROSER3Q2NL68 480 aa16.15■□□□□ 0.18
CSNK1E-211ENST00000451964 CNBD1Q8NA66 436 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms