RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 KCNQ3O43525 872 aa17.09■□□□□ 0.33
SNRNP27-203ENST00000450162 CCDC27Q2M243 656 aa17.09■□□□□ 0.33
SNRNP27-203ENST00000450162 INTS5Q6P9B9 1019 aaKnown RBP17.09■□□□□ 0.33
SNRNP27-203ENST00000450162 PHF14O94880 888 aa17.08■□□□□ 0.32
SNRNP27-203ENST00000450162 MIS18AQ9NYP9 233 aa17.08■□□□□ 0.32
SNRNP27-203ENST00000450162 TSPYL4Q9UJ04 414 aa17.08■□□□□ 0.32
SNRNP27-203ENST00000450162 ATF5Q9Y2D1 282 aaPredicted RBP17.08■□□□□ 0.32
SNRNP27-203ENST00000450162 COL5A3P25940 1745 aaPredicted RBP17.07■□□□□ 0.32
SNRNP27-203ENST00000450162 CHL1O00533 1208 aa17.07■□□□□ 0.32
SNRNP27-203ENST00000450162 POLD1P28340 1107 aa17.07■□□□□ 0.32
SNRNP27-203ENST00000450162 RFC4P35249 363 aa17.07■□□□□ 0.32
SNRNP27-203ENST00000450162 EIF4A1P60842 406 aaKnown RBP17.07■□□□□ 0.32
SNRNP27-203ENST00000450162 PTGER2P43116 358 aa17.06■□□□□ 0.32
SNRNP27-203ENST00000450162 FAM9BQ8IZU0 186 aa17.06■□□□□ 0.32
SNRNP27-203ENST00000450162 ARHGEF1Q92888 912 aaKnown RBP17.06■□□□□ 0.32
SNRNP27-203ENST00000450162 CFAP44Q96MT7 982 aa17.06■□□□□ 0.32
SNRNP27-203ENST00000450162 SGIP1Q9BQI5 828 aa17.06■□□□□ 0.32
SNRNP27-203ENST00000450162 PPP1R1BQ9UD71 204 aaPredicted RBP17.06■□□□□ 0.32
SNRNP27-203ENST00000450162 TJP1Q07157 1748 aa17.06■□□□□ 0.32
SNRNP27-203ENST00000450162 UBR3Q6ZT12 1888 aa17.05■□□□□ 0.32
SNRNP27-203ENST00000450162 A0A087WZG4 1122 aa17.05■□□□□ 0.32
SNRNP27-203ENST00000450162 NPM2Q86SE8 214 aaKnown RBP17.05■□□□□ 0.32
SNRNP27-203ENST00000450162 AMIGO3Q86WK7 504 aa17.05■□□□□ 0.32
SNRNP27-203ENST00000450162 NLGN1Q8N2Q7 840 aa17.05■□□□□ 0.32
SNRNP27-203ENST00000450162 SOS1Q07889 1333 aaPredicted RBP17.04■□□□□ 0.32
SNRNP27-203ENST00000450162 GIGYF1O75420 1035 aaPredicted RBP17.04■□□□□ 0.32
SNRNP27-203ENST00000450162 IL6STP40189 918 aaPredicted RBP17.04■□□□□ 0.32
SNRNP27-203ENST00000450162 GNAI1P63096 354 aa17.04■□□□□ 0.32
SNRNP27-203ENST00000450162 ZBTB1Q9Y2K1 713 aa17.04■□□□□ 0.32
SNRNP27-203ENST00000450162 USP16Q9Y5T5 823 aa17.04■□□□□ 0.32
SNRNP27-203ENST00000450162 TUBGCP6Q96RT7 1819 aa17.03■□□□□ 0.32
SNRNP27-203ENST00000450162 IFT57Q9NWB7 429 aa17.03■□□□□ 0.32
SNRNP27-203ENST00000450162 MYH14Q7Z406 1995 aaKnown RBP17.02■□□□□ 0.32
SNRNP27-203ENST00000450162 ZPR1O75312 459 aa17.02■□□□□ 0.32
SNRNP27-203ENST00000450162 CANXP27824 592 aaKnown RBP17.02■□□□□ 0.32
SNRNP27-203ENST00000450162 EIF5P55010 431 aaKnown RBP17.02■□□□□ 0.32
SNRNP27-203ENST00000450162 ARXQ96QS3 562 aa17.02■□□□□ 0.32
SNRNP27-203ENST00000450162 ZNF853P0CG23 659 aa17.01■□□□□ 0.31
SNRNP27-203ENST00000450162 WWC1Q8IX03 1113 aa17.01■□□□□ 0.31
SNRNP27-203ENST00000450162 LAS1LQ9Y4W2 734 aaKnown RBP17.01■□□□□ 0.31
SNRNP27-203ENST00000450162 COL15A1P39059 1388 aa17.01■□□□□ 0.31
SNRNP27-203ENST00000450162 IL16Q14005 1332 aa17■□□□□ 0.31
SNRNP27-203ENST00000450162 USP42Q9H9J4 1324 aaKnown RBP17■□□□□ 0.31
SNRNP27-203ENST00000450162 KDM3BQ7LBC6 1761 aa17■□□□□ 0.31
SNRNP27-203ENST00000450162 A1BGP04217 495 aa17■□□□□ 0.31
SNRNP27-203ENST00000450162 HOXB7P09629 217 aa17■□□□□ 0.31
SNRNP27-203ENST00000450162 SMIM5Q71RC9 77 aa17■□□□□ 0.31
SNRNP27-203ENST00000450162 CHMP4AQ9BY43 222 aa17■□□□□ 0.31
SNRNP27-203ENST00000450162 NARFQ9UHQ1 456 aa17■□□□□ 0.31
SNRNP27-203ENST00000450162 ERBB4Q15303 1308 aa16.99■□□□□ 0.31
SNRNP27-203ENST00000450162 GYS1P13807 737 aa16.99■□□□□ 0.31
SNRNP27-203ENST00000450162 WDR63Q8IWG1 891 aa16.99■□□□□ 0.31
SNRNP27-203ENST00000450162 SRCAPQ6ZRS2 3230 aa16.99■□□□□ 0.31
SNRNP27-203ENST00000450162 COL24A1Q17RW2 1714 aa16.99■□□□□ 0.31
SNRNP27-203ENST00000450162 PRAMEF22A3QJZ6 481 aa16.98■□□□□ 0.31
SNRNP27-203ENST00000450162 RGL2O15211 777 aa16.98■□□□□ 0.31
SNRNP27-203ENST00000450162 MSL1Q68DK7 614 aa16.98■□□□□ 0.31
SNRNP27-203ENST00000450162 MBIPQ9NS73 344 aa16.97■□□□□ 0.31
SNRNP27-203ENST00000450162 USPL1Q5W0Q7 1092 aa16.95■□□□□ 0.3
SNRNP27-203ENST00000450162 MIER1Q8N108 512 aa16.95■□□□□ 0.3
SNRNP27-203ENST00000450162 SRP68Q9UHB9 627 aaKnown RBP16.95■□□□□ 0.3
SNRNP27-203ENST00000450162 ZNF330Q9Y3S2 320 aaPredicted RBP16.95■□□□□ 0.3
SNRNP27-203ENST00000450162 NBPF26B4DH59 902 aa16.94■□□□□ 0.3
SNRNP27-203ENST00000450162 MMP10P09238 476 aa16.94■□□□□ 0.3
SNRNP27-203ENST00000450162 NBPF10Q6P3W6 841 aaKnown RBP16.94■□□□□ 0.3
SNRNP27-203ENST00000450162 CLEC4GQ6UXB4 293 aa16.94■□□□□ 0.3
SNRNP27-203ENST00000450162 DZIP3Q86Y13 1208 aaKnown RBP16.94■□□□□ 0.3
SNRNP27-203ENST00000450162 NBPF15Q8N660 670 aa16.94■□□□□ 0.3
SNRNP27-203ENST00000450162 SYT17Q9BSW7 474 aa16.94■□□□□ 0.3
SNRNP27-203ENST00000450162 FHDC1Q9C0D6 1143 aaPredicted RBP16.94■□□□□ 0.3
SNRNP27-203ENST00000450162 CD2APQ9Y5K6 639 aa16.94■□□□□ 0.3
SNRNP27-203ENST00000450162 EIF2S2P20042 333 aaKnown RBP16.93■□□□□ 0.3
SNRNP27-203ENST00000450162 FKBP8Q14318 412 aa16.93■□□□□ 0.3
SNRNP27-203ENST00000450162 TBC1D2BQ9UPU7 963 aa16.93■□□□□ 0.3
SNRNP27-203ENST00000450162 PARP3Q9Y6F1 533 aa16.93■□□□□ 0.3
SNRNP27-203ENST00000450162 TM4SF1P30408 202 aa16.92■□□□□ 0.3
SNRNP27-203ENST00000450162 DUSP27Q5VZP5 1158 aa16.92■□□□□ 0.3
SNRNP27-203ENST00000450162 ZNF652Q9Y2D9 606 aa16.92■□□□□ 0.3
SNRNP27-203ENST00000450162 LAMB4A4D0S4 1761 aa16.92■□□□□ 0.3
SNRNP27-203ENST00000450162 C4AP0C0L4 1744 aa16.91■□□□□ 0.3
SNRNP27-203ENST00000450162 CAMTA2O94983 1202 aa16.91■□□□□ 0.3
SNRNP27-203ENST00000450162 BCL2L12Q9HB09 334 aa16.91■□□□□ 0.3
SNRNP27-203ENST00000450162 SALL2Q9Y467 1007 aaPredicted RBP16.91■□□□□ 0.3
SNRNP27-203ENST00000450162 ERVV-1B6SEH8 477 aa16.9■□□□□ 0.3
SNRNP27-203ENST00000450162 PIP4K2AP48426 406 aaPredicted RBP16.9■□□□□ 0.3
SNRNP27-203ENST00000450162 HDGFL1Q5TGJ6 251 aa16.9■□□□□ 0.3
SNRNP27-203ENST00000450162 MYH16Q9H6N6 1097 aa16.9■□□□□ 0.3
SNRNP27-203ENST00000450162 DDX21Q9NR30 783 aaKnown RBP eCLIP16.9■□□□□ 0.3
SNRNP27-203ENST00000450162 DBF4Q9UBU7 674 aaPredicted RBP16.9■□□□□ 0.3
SNRNP27-203ENST00000450162 GOLGA2Q08379 1002 aa16.89■□□□□ 0.29
SNRNP27-203ENST00000450162 NFIXQ14938 502 aa16.89■□□□□ 0.29
SNRNP27-203ENST00000450162 PDIA6Q15084 440 aa16.89■□□□□ 0.29
SNRNP27-203ENST00000450162 KRT24Q2M2I5 525 aa16.89■□□□□ 0.29
SNRNP27-203ENST00000450162 KIF6Q6ZMV9 814 aa16.89■□□□□ 0.29
SNRNP27-203ENST00000450162 SENP3-EIF4A1A0A087X0R7 540 aa16.88■□□□□ 0.29
SNRNP27-203ENST00000450162 MYL6BP14649 208 aa16.88■□□□□ 0.29
SNRNP27-203ENST00000450162 ZNF521Q96K83 1311 aa16.88■□□□□ 0.29
SNRNP27-203ENST00000450162 POLRMTO00411 1230 aaKnown RBP16.87■□□□□ 0.29
SNRNP27-203ENST00000450162 CCDC30Q5VVM6 783 aa16.87■□□□□ 0.29
SNRNP27-203ENST00000450162 LRP10Q7Z4F1 713 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms