RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 CUEDC1Q9NWM3 386 aaPredicted RBP5.57□□□□□ -1.52
PMS1-216ENST00000447734 PRKAG2Q9UGJ0 569 aa5.57□□□□□ -1.52
PMS1-216ENST00000447734 TMA7Q9Y2S6 64 aaKnown RBP5.57□□□□□ -1.52
PMS1-216ENST00000447734 CAPN5O15484 640 aaPredicted RBP5.56□□□□□ -1.52
PMS1-216ENST00000447734 LDHBP07195 334 aaKnown RBP5.56□□□□□ -1.52
PMS1-216ENST00000447734 CCNYL3P0C7X3 344 aa5.56□□□□□ -1.52
PMS1-216ENST00000447734 WEE1P30291 646 aa5.56□□□□□ -1.52
PMS1-216ENST00000447734 MAPK8P45983 427 aa5.56□□□□□ -1.52
PMS1-216ENST00000447734 FMR1Q06787 632 aaKnown RBP eCLIP5.56□□□□□ -1.52
PMS1-216ENST00000447734 LDLRAD1Q5T700 205 aa5.56□□□□□ -1.52
PMS1-216ENST00000447734 CAPN12Q6ZSI9 719 aa5.56□□□□□ -1.52
PMS1-216ENST00000447734 METTL16Q86W50 562 aaKnown RBP5.56□□□□□ -1.52
PMS1-216ENST00000447734 TMC1Q8TDI8 760 aa5.56□□□□□ -1.52
PMS1-216ENST00000447734 DHX38Q92620 1227 aaKnown RBP5.56□□□□□ -1.52
PMS1-216ENST00000447734 RNF34Q969K3 372 aa5.56□□□□□ -1.52
PMS1-216ENST00000447734 TGIF2Q9GZN2 237 aa5.56□□□□□ -1.52
PMS1-216ENST00000447734 CAPN10Q9HC96 672 aa5.56□□□□□ -1.52
PMS1-216ENST00000447734 METTL5Q9NRN9 209 aaKnown RBP5.56□□□□□ -1.52
PMS1-216ENST00000447734 PARP2Q9UGN5 583 aa5.56□□□□□ -1.52
PMS1-216ENST00000447734 TREHO43280 583 aa5.55□□□□□ -1.52
PMS1-216ENST00000447734 SORBS3O60504 671 aa5.55□□□□□ -1.52
PMS1-216ENST00000447734 PRPF40AO75400 957 aaKnown RBP5.55□□□□□ -1.52
PMS1-216ENST00000447734 GTF2F1P35269 517 aaKnown RBP eCLIP5.55□□□□□ -1.52
PMS1-216ENST00000447734 GNL2Q13823 731 aaKnown RBP5.55□□□□□ -1.52
PMS1-216ENST00000447734 NAA30Q147X3 362 aaPredicted RBP5.55□□□□□ -1.52
PMS1-216ENST00000447734 SLC43A3Q8NBI5 491 aa5.55□□□□□ -1.52
PMS1-216ENST00000447734 COL26A1Q96A83 441 aa5.55□□□□□ -1.52
PMS1-216ENST00000447734 ZFP42Q96MM3 310 aa5.55□□□□□ -1.52
PMS1-216ENST00000447734 FAM161BQ96MY7 647 aa5.55□□□□□ -1.52
PMS1-216ENST00000447734 VTI1BQ9UEU0 232 aa5.55□□□□□ -1.52
PMS1-216ENST00000447734 PCDHGA11Q9Y5H2 935 aa5.55□□□□□ -1.52
PMS1-216ENST00000447734 SOBPA7XYQ1 873 aa5.54□□□□□ -1.52
PMS1-216ENST00000447734 SH3BP2P78314 561 aa5.54□□□□□ -1.52
PMS1-216ENST00000447734 RNF20Q5VTR2 975 aa5.54□□□□□ -1.52
PMS1-216ENST00000447734 TSEN2Q8NCE0 465 aaKnown RBP5.54□□□□□ -1.52
PMS1-216ENST00000447734 PURBQ96QR8 312 aaKnown RBP5.54□□□□□ -1.52
PMS1-216ENST00000447734 DUSP9Q99956 384 aaKnown RBP5.54□□□□□ -1.52
PMS1-216ENST00000447734 NUDT12Q9BQG2 462 aa5.54□□□□□ -1.52
PMS1-216ENST00000447734 EVA1BQ9NVM1 165 aa5.54□□□□□ -1.52
PMS1-216ENST00000447734 NLRP2Q9NX02 1062 aa5.54□□□□□ -1.52
PMS1-216ENST00000447734 IQSEC3Q9UPP2 1182 aaPredicted RBP5.54□□□□□ -1.52
PMS1-216ENST00000447734 M0R2N6 131 aa5.53□□□□□ -1.52
PMS1-216ENST00000447734 GIGYF1O75420 1035 aaPredicted RBP5.53□□□□□ -1.52
PMS1-216ENST00000447734 VSIG8P0DPA2 414 aa5.53□□□□□ -1.52
PMS1-216ENST00000447734 NPR3P17342 541 aa5.53□□□□□ -1.52
PMS1-216ENST00000447734 MPSTP25325 297 aa5.53□□□□□ -1.52
PMS1-216ENST00000447734 ZNF76P36508 570 aa5.53□□□□□ -1.52
PMS1-216ENST00000447734 FANCCQ00597 558 aa5.53□□□□□ -1.52
PMS1-216ENST00000447734 ATP2B2Q01814 1243 aa5.53□□□□□ -1.52
PMS1-216ENST00000447734 PLCB3Q01970 1234 aa5.53□□□□□ -1.52
PMS1-216ENST00000447734 USP4Q13107 963 aa5.53□□□□□ -1.52
PMS1-216ENST00000447734 PSMD2Q13200 908 aa5.53□□□□□ -1.52
PMS1-216ENST00000447734 ZNF662Q6ZS27 426 aa5.53□□□□□ -1.52
PMS1-216ENST00000447734 TMC4Q7Z404 712 aa5.53□□□□□ -1.52
PMS1-216ENST00000447734 EHBP1Q8NDI1 1231 aa5.53□□□□□ -1.52
PMS1-216ENST00000447734 ARMC5Q96C12 935 aa5.53□□□□□ -1.52
PMS1-216ENST00000447734 CITED4Q96RK1 184 aa5.53□□□□□ -1.52
PMS1-216ENST00000447734 CARD14Q9BXL6 1004 aa5.53□□□□□ -1.52
PMS1-216ENST00000447734 TLL2Q9Y6L7 1015 aa5.53□□□□□ -1.52
PMS1-216ENST00000447734 TLDC2A0PJX2 215 aa5.52□□□□□ -1.53
PMS1-216ENST00000447734 FOXO3O43524 673 aa5.52□□□□□ -1.53
PMS1-216ENST00000447734 DNAJA1P31689 397 aaKnown RBP5.52□□□□□ -1.53
PMS1-216ENST00000447734 DAB2P98082 770 aa5.52□□□□□ -1.53
PMS1-216ENST00000447734 EHHADHQ08426 723 aa5.52□□□□□ -1.53
PMS1-216ENST00000447734 AAMPQ13685 434 aa5.52□□□□□ -1.53
PMS1-216ENST00000447734 NBPF20Q3BBV1 942 aa5.52□□□□□ -1.53
PMS1-216ENST00000447734 CCDC144BQ3MJ40 725 aa5.52□□□□□ -1.53
PMS1-216ENST00000447734 SH3BP5LQ7L8J4 393 aa5.52□□□□□ -1.53
PMS1-216ENST00000447734 DMRTB1Q96MA1 342 aa5.52□□□□□ -1.53
PMS1-216ENST00000447734 ACBD3Q9H3P7 528 aa5.52□□□□□ -1.53
PMS1-216ENST00000447734 MAGEB6P1A0A0J9YX57 407 aa5.51□□□□□ -1.53
PMS1-216ENST00000447734 IGFBP4P22692 258 aa5.51□□□□□ -1.53
PMS1-216ENST00000447734 KCNMA1Q12791 1236 aa5.51□□□□□ -1.53
PMS1-216ENST00000447734 DSC3Q14574 896 aa5.51□□□□□ -1.53
PMS1-216ENST00000447734 LINC01559Q495D7 138 aa5.51□□□□□ -1.53
PMS1-216ENST00000447734 PMFBP1Q8TBY8 1022 aa5.51□□□□□ -1.53
PMS1-216ENST00000447734 VTI1AQ96AJ9 217 aa5.51□□□□□ -1.53
PMS1-216ENST00000447734 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.51□□□□□ -1.53
PMS1-216ENST00000447734 PCDHB11Q9Y5F2 797 aa5.51□□□□□ -1.53
PMS1-216ENST00000447734 TNNI2P48788 182 aa5.5□□□□□ -1.53
PMS1-216ENST00000447734 SDE2Q6IQ49 451 aa5.5□□□□□ -1.53
PMS1-216ENST00000447734 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.5□□□□□ -1.53
PMS1-216ENST00000447734 GAS2L2Q8NHY3 880 aa5.5□□□□□ -1.53
PMS1-216ENST00000447734 KLF16Q9BXK1 252 aaPredicted RBP5.5□□□□□ -1.53
PMS1-216ENST00000447734 RNF19AQ9NV58 838 aa5.5□□□□□ -1.53
PMS1-216ENST00000447734 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.5□□□□□ -1.53
PMS1-216ENST00000447734 WASF2Q9Y6W5 498 aa5.5□□□□□ -1.53
PMS1-216ENST00000447734 ARID4BQ4LE39 1312 aaPredicted RBP5.49□□□□□ -1.53
PMS1-216ENST00000447734 TIMP2P16035 220 aa5.49□□□□□ -1.53
PMS1-216ENST00000447734 PDE3BQ13370 1112 aa5.49□□□□□ -1.53
PMS1-216ENST00000447734 ALKBH2Q6NS38 261 aa5.49□□□□□ -1.53
PMS1-216ENST00000447734 MRPL14Q6P1L8 145 aaKnown RBP5.49□□□□□ -1.53
PMS1-216ENST00000447734 C16orf46Q6P387 395 aa5.49□□□□□ -1.53
PMS1-216ENST00000447734 NOL8Q76FK4 1167 aaKnown RBP5.49□□□□□ -1.53
PMS1-216ENST00000447734 SLC10A4Q96EP9 437 aa5.49□□□□□ -1.53
PMS1-216ENST00000447734 GMLQ99445 158 aa5.49□□□□□ -1.53
PMS1-216ENST00000447734 ZSWIM4Q9H7M6 989 aa5.49□□□□□ -1.53
PMS1-216ENST00000447734 CCDC87Q9NVE4 849 aa5.49□□□□□ -1.53
PMS1-216ENST00000447734 WWC3Q9ULE0 1092 aa5.49□□□□□ -1.53
PMS1-216ENST00000447734 SBNO2Q9Y2G9 1366 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms