RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 LMOD3Q0VAK6 560 aa26.95■■□□□ 1.9
PTX4-203ENST00000447419 VSIG10Q8N0Z9 540 aa26.95■■□□□ 1.9
PTX4-203ENST00000447419 PIP4K2AP48426 406 aaPredicted RBP26.94■■□□□ 1.9
PTX4-203ENST00000447419 KLHL34Q8N239 644 aa26.93■■□□□ 1.9
PTX4-203ENST00000447419 TSPYL4Q9UJ04 414 aa26.93■■□□□ 1.9
PTX4-203ENST00000447419 ZNF330Q9Y3S2 320 aaPredicted RBP26.93■■□□□ 1.9
PTX4-203ENST00000447419 USP16Q9Y5T5 823 aa26.93■■□□□ 1.9
PTX4-203ENST00000447419 SRP68Q9UHB9 627 aaKnown RBP26.92■■□□□ 1.9
PTX4-203ENST00000447419 MYH14Q7Z406 1995 aaKnown RBP26.92■■□□□ 1.9
PTX4-203ENST00000447419 STARD3NLO95772 234 aa26.91■■□□□ 1.9
PTX4-203ENST00000447419 A1BGP04217 495 aa26.91■■□□□ 1.9
PTX4-203ENST00000447419 RFC4P35249 363 aa26.91■■□□□ 1.9
PTX4-203ENST00000447419 SALL2Q9Y467 1007 aaPredicted RBP26.9■■□□□ 1.9
PTX4-203ENST00000447419 POLD1P28340 1107 aa26.9■■□□□ 1.9
PTX4-203ENST00000447419 ARXQ96QS3 562 aa26.9■■□□□ 1.9
PTX4-203ENST00000447419 CICQ96RK0 1608 aaPredicted RBP26.88■■□□□ 1.89
PTX4-203ENST00000447419 SNRPA1P09661 255 aaKnown RBP26.88■■□□□ 1.89
PTX4-203ENST00000447419 EIF4A1P60842 406 aaKnown RBP26.88■■□□□ 1.89
PTX4-203ENST00000447419 SOS1Q07889 1333 aaPredicted RBP26.88■■□□□ 1.89
PTX4-203ENST00000447419 FHDC1Q9C0D6 1143 aaPredicted RBP26.87■■□□□ 1.89
PTX4-203ENST00000447419 DIEXFQ68CQ4 756 aaKnown RBP26.86■■□□□ 1.89
PTX4-203ENST00000447419 TEX13AQ9BXU3 409 aaPredicted RBP26.86■■□□□ 1.89
PTX4-203ENST00000447419 ADRA2BP18089 450 aa26.85■■□□□ 1.89
PTX4-203ENST00000447419 COL15A1P39059 1388 aa26.84■■□□□ 1.89
PTX4-203ENST00000447419 GYS1P13807 737 aa26.84■■□□□ 1.89
PTX4-203ENST00000447419 KRT24Q2M2I5 525 aa26.84■■□□□ 1.89
PTX4-203ENST00000447419 USPL1Q5W0Q7 1092 aa26.83■■□□□ 1.89
PTX4-203ENST00000447419 KDM3BQ7LBC6 1761 aa26.83■■□□□ 1.89
PTX4-203ENST00000447419 GIGYF1O75420 1035 aaPredicted RBP26.82■■□□□ 1.88
PTX4-203ENST00000447419 USP42Q9H9J4 1324 aaKnown RBP26.81■■□□□ 1.88
PTX4-203ENST00000447419 MMP10P09238 476 aa26.81■■□□□ 1.88
PTX4-203ENST00000447419 FKBP8Q14318 412 aa26.81■■□□□ 1.88
PTX4-203ENST00000447419 TBC1D2BQ9UPU7 963 aa26.8■■□□□ 1.88
PTX4-203ENST00000447419 CHL1O00533 1208 aa26.8■■□□□ 1.88
PTX4-203ENST00000447419 ZPR1O75312 459 aa26.8■■□□□ 1.88
PTX4-203ENST00000447419 EIF5P55010 431 aaKnown RBP26.8■■□□□ 1.88
PTX4-203ENST00000447419 NECTIN2Q92692 538 aa26.8■■□□□ 1.88
PTX4-203ENST00000447419 C4AP0C0L4 1744 aa26.79■■□□□ 1.88
PTX4-203ENST00000447419 NBPF26B4DH59 902 aa26.79■■□□□ 1.88
PTX4-203ENST00000447419 NBPF10Q6P3W6 841 aaKnown RBP26.79■■□□□ 1.88
PTX4-203ENST00000447419 NGEFQ8N5V2 710 aa26.79■■□□□ 1.88
PTX4-203ENST00000447419 NBPF15Q8N660 670 aa26.79■■□□□ 1.88
PTX4-203ENST00000447419 SYT17Q9BSW7 474 aa26.79■■□□□ 1.88
PTX4-203ENST00000447419 EIF2S2P20042 333 aaKnown RBP26.78■■□□□ 1.88
PTX4-203ENST00000447419 MBIPQ9NS73 344 aa26.78■■□□□ 1.88
PTX4-203ENST00000447419 MIER1Q8N108 512 aa26.77■■□□□ 1.88
PTX4-203ENST00000447419 IL6STP40189 918 aaPredicted RBP26.76■■□□□ 1.87
PTX4-203ENST00000447419 NLGN1Q8N2Q7 840 aa26.76■■□□□ 1.87
PTX4-203ENST00000447419 CFAP44Q96MT7 982 aa26.76■■□□□ 1.87
PTX4-203ENST00000447419 WWC1Q8IX03 1113 aa26.75■■□□□ 1.87
PTX4-203ENST00000447419 NLGN2Q8NFZ4 835 aa26.75■■□□□ 1.87
PTX4-203ENST00000447419 NARFQ9UHQ1 456 aa26.75■■□□□ 1.87
PTX4-203ENST00000447419 MYL6BP14649 208 aa26.75■■□□□ 1.87
PTX4-203ENST00000447419 NPM2Q86SE8 214 aaKnown RBP26.75■■□□□ 1.87
PTX4-203ENST00000447419 BCL2L12Q9HB09 334 aa26.75■■□□□ 1.87
PTX4-203ENST00000447419 BABAM1Q9NWV8 329 aa26.75■■□□□ 1.87
PTX4-203ENST00000447419 BICDL1Q6ZP65 573 aa26.74■■□□□ 1.87
PTX4-203ENST00000447419 COL24A1Q17RW2 1714 aa26.73■■□□□ 1.87
PTX4-203ENST00000447419 ANXA1P04083 346 aa26.72■■□□□ 1.87
PTX4-203ENST00000447419 ZNF853P0CG23 659 aa26.72■■□□□ 1.87
PTX4-203ENST00000447419 DDR1Q08345 913 aa26.72■■□□□ 1.87
PTX4-203ENST00000447419 DZIP3Q86Y13 1208 aaKnown RBP26.72■■□□□ 1.87
PTX4-203ENST00000447419 TSR2Q969E8 191 aaKnown RBP26.72■■□□□ 1.87
PTX4-203ENST00000447419 IFT57Q9NWB7 429 aa26.72■■□□□ 1.87
PTX4-203ENST00000447419 ELL2O00472 640 aaPredicted RBP26.71■■□□□ 1.87
PTX4-203ENST00000447419 WWC3Q9ULE0 1092 aa26.71■■□□□ 1.87
PTX4-203ENST00000447419 A0A087WZG4 1122 aa26.7■■□□□ 1.87
PTX4-203ENST00000447419 GNAI1P63096 354 aa26.7■■□□□ 1.87
PTX4-203ENST00000447419 CALD1Q05682 793 aaKnown RBP26.7■■□□□ 1.87
PTX4-203ENST00000447419 PARP3Q9Y6F1 533 aa26.7■■□□□ 1.87
PTX4-203ENST00000447419 CCER2I3L3R5 266 aa26.69■■□□□ 1.86
PTX4-203ENST00000447419 NFIXQ14938 502 aa26.69■■□□□ 1.86
PTX4-203ENST00000447419 CCDC27Q2M243 656 aa26.69■■□□□ 1.86
PTX4-203ENST00000447419 PROSER3Q2NL68 480 aa26.69■■□□□ 1.86
PTX4-203ENST00000447419 CAMTA2O94983 1202 aa26.68■■□□□ 1.86
PTX4-203ENST00000447419 LAMB4A4D0S4 1761 aa26.67■■□□□ 1.86
PTX4-203ENST00000447419 TBC1D9BQ66K14 1250 aa26.67■■□□□ 1.86
PTX4-203ENST00000447419 PELP1Q8IZL8 1130 aaKnown RBP26.67■■□□□ 1.86
PTX4-203ENST00000447419 DUSP27Q5VZP5 1158 aa26.66■■□□□ 1.86
PTX4-203ENST00000447419 POLRMTO00411 1230 aaKnown RBP26.65■■□□□ 1.86
PTX4-203ENST00000447419 TM4SF1P30408 202 aa26.65■■□□□ 1.86
PTX4-203ENST00000447419 TTLL7Q6ZT98 887 aa26.65■■□□□ 1.86
PTX4-203ENST00000447419 C8orf58Q8NAV2 365 aa26.65■■□□□ 1.86
PTX4-203ENST00000447419 GOLGB1Q14789 3259 aaKnown RBP26.64■■□□□ 1.86
PTX4-203ENST00000447419 PDIA6Q15084 440 aa26.64■■□□□ 1.85
PTX4-203ENST00000447419 HDGFL1Q5TGJ6 251 aa26.64■■□□□ 1.85
PTX4-203ENST00000447419 HLFQ16534 295 aa26.62■■□□□ 1.85
PTX4-203ENST00000447419 CCDC24Q8N4L8 307 aa26.62■■□□□ 1.85
PTX4-203ENST00000447419 TSPYL6Q8N831 410 aa26.62■■□□□ 1.85
PTX4-203ENST00000447419 ZBTB3Q9H5J0 574 aa26.62■■□□□ 1.85
PTX4-203ENST00000447419 SPINK5Q9NQ38 1064 aaPredicted RBP26.62■■□□□ 1.85
PTX4-203ENST00000447419 CHPF2Q9P2E5 772 aa26.62■■□□□ 1.85
PTX4-203ENST00000447419 CD2APQ9Y5K6 639 aa26.62■■□□□ 1.85
PTX4-203ENST00000447419 AIMP1Q12904 312 aaKnown RBP26.61■■□□□ 1.85
PTX4-203ENST00000447419 SERPINB2P05120 415 aa26.6■■□□□ 1.85
PTX4-203ENST00000447419 SCN7AQ01118 1682 aa26.6■■□□□ 1.85
PTX4-203ENST00000447419 FAM177BA6PVY3 158 aa26.59■■□□□ 1.85
PTX4-203ENST00000447419 LRP10Q7Z4F1 713 aa26.59■■□□□ 1.85
PTX4-203ENST00000447419 UTRNP46939 3433 aa26.59■■□□□ 1.85
PTX4-203ENST00000447419 TCERG1O14776 1098 aaKnown RBP26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms