RNA–Protein interactions for RNA: ENST00000446547.5

RAB5A-205, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5A, Length 1,358 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-205ENST00000446547 C1QTNF2Q9BXJ5 285 aa8□□□□□ -1.13
RAB5A-205ENST00000446547 CHIC2Q9UKJ5 165 aa8□□□□□ -1.13
RAB5A-205ENST00000446547 EPRSP07814 1512 aaKnown RBP8□□□□□ -1.13
RAB5A-205ENST00000446547 BCORL1Q5H9F3 1711 aa8□□□□□ -1.13
RAB5A-205ENST00000446547 MAP7D1Q3KQU3 841 aa7.99□□□□□ -1.13
RAB5A-205ENST00000446547 OXLD1Q5BKU9 147 aa7.99□□□□□ -1.13
RAB5A-205ENST00000446547 SH3RF1Q7Z6J0 888 aa7.99□□□□□ -1.13
RAB5A-205ENST00000446547 OGFOD1Q8N543 542 aa7.99□□□□□ -1.13
RAB5A-205ENST00000446547 FAM200AQ8TCP9 573 aa7.99□□□□□ -1.13
RAB5A-205ENST00000446547 NANOS1Q8WY41 292 aaKnown RBP7.99□□□□□ -1.13
RAB5A-205ENST00000446547 SLAIN2Q9P270 581 aa7.99□□□□□ -1.13
RAB5A-205ENST00000446547 MAP4K5Q9Y4K4 846 aa7.99□□□□□ -1.13
RAB5A-205ENST00000446547 CUX1P39880 1505 aa7.99□□□□□ -1.13
RAB5A-205ENST00000446547 TEX14Q8IWB6 1497 aa7.99□□□□□ -1.13
RAB5A-205ENST00000446547 ABCC2Q92887 1545 aa7.99□□□□□ -1.13
RAB5A-205ENST00000446547 LZTS3O60299 673 aaPredicted RBP7.98□□□□□ -1.13
RAB5A-205ENST00000446547 ERFEQ4G0M1 354 aa7.98□□□□□ -1.13
RAB5A-205ENST00000446547 ANKMY2Q8IV38 441 aa7.98□□□□□ -1.13
RAB5A-205ENST00000446547 ZNF594Q96JF6 807 aaPredicted RBP7.98□□□□□ -1.13
RAB5A-205ENST00000446547 CNTNAP3BQ96NU0 1288 aa7.98□□□□□ -1.13
RAB5A-205ENST00000446547 TSEN34Q9BSV6 310 aaKnown RBP7.98□□□□□ -1.13
RAB5A-205ENST00000446547 CNTNAP3Q9BZ76 1288 aa7.98□□□□□ -1.13
RAB5A-205ENST00000446547 DOLKQ9UPQ8 538 aa7.98□□□□□ -1.13
RAB5A-205ENST00000446547 RIMS1Q86UR5 1692 aaKnown RBP7.98□□□□□ -1.13
RAB5A-205ENST00000446547 CLDN10P78369 228 aa7.97□□□□□ -1.13
RAB5A-205ENST00000446547 DPYDQ12882 1025 aa7.97□□□□□ -1.13
RAB5A-205ENST00000446547 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.97□□□□□ -1.13
RAB5A-205ENST00000446547 PHLDB3Q6NSJ2 640 aa7.97□□□□□ -1.13
RAB5A-205ENST00000446547 CDCA7Q9BWT1 371 aaPredicted RBP7.97□□□□□ -1.13
RAB5A-205ENST00000446547 NOD1Q9Y239 953 aa7.97□□□□□ -1.13
RAB5A-205ENST00000446547 PLB1Q6P1J6 1458 aa7.97□□□□□ -1.13
RAB5A-205ENST00000446547 B4GALNT3Q6L9W6 998 aa7.97□□□□□ -1.13
RAB5A-205ENST00000446547 TRMT44Q8IYL2 757 aaKnown RBP7.97□□□□□ -1.13
RAB5A-205ENST00000446547 DNAAF2Q9NVR5 837 aaKnown RBP7.97□□□□□ -1.13
RAB5A-205ENST00000446547 RUSC2Q8N2Y8 1516 aa7.96□□□□□ -1.13
RAB5A-205ENST00000446547 HSPA1LP34931 641 aa7.96□□□□□ -1.14
RAB5A-205ENST00000446547 PTSQ03393 145 aa7.96□□□□□ -1.14
RAB5A-205ENST00000446547 ZNF385CQ66K41 422 aaPredicted RBP7.96□□□□□ -1.14
RAB5A-205ENST00000446547 RGS17Q9UGC6 210 aaPredicted RBP7.96□□□□□ -1.14
RAB5A-205ENST00000446547 KIAA1024Q9UPX6 916 aa7.96□□□□□ -1.14
RAB5A-205ENST00000446547 EMILIN1Q9Y6C2 1016 aa7.96□□□□□ -1.14
RAB5A-205ENST00000446547 CUL7Q14999 1698 aa7.95□□□□□ -1.14
RAB5A-205ENST00000446547 TTLL8A6PVC2 850 aa7.95□□□□□ -1.14
RAB5A-205ENST00000446547 ZBTB7BO15156 539 aaPredicted RBP7.95□□□□□ -1.14
RAB5A-205ENST00000446547 FSHRP23945 695 aa7.95□□□□□ -1.14
RAB5A-205ENST00000446547 SSFA2P28290 1259 aa7.95□□□□□ -1.14
RAB5A-205ENST00000446547 SND1Q7KZF4 910 aaKnown RBP eCLIP7.95□□□□□ -1.14
RAB5A-205ENST00000446547 TRIM50Q86XT4 487 aa7.95□□□□□ -1.14
RAB5A-205ENST00000446547 SLC10A4Q96EP9 437 aa7.95□□□□□ -1.14
RAB5A-205ENST00000446547 COL25A1Q9BXS0 654 aaPredicted RBP7.95□□□□□ -1.14
RAB5A-205ENST00000446547 ABCA10Q8WWZ4 1543 aa7.94□□□□□ -1.14
RAB5A-205ENST00000446547 SLURP2P0DP57 97 aa7.94□□□□□ -1.14
RAB5A-205ENST00000446547 ATP1A2P50993 1020 aa7.94□□□□□ -1.14
RAB5A-205ENST00000446547 RAB15P59190 212 aa7.94□□□□□ -1.14
RAB5A-205ENST00000446547 GTF2IP78347 998 aa7.94□□□□□ -1.14
RAB5A-205ENST00000446547 CCDC27Q2M243 656 aa7.94□□□□□ -1.14
RAB5A-205ENST00000446547 TXNDC2Q86VQ3 553 aa7.94□□□□□ -1.14
RAB5A-205ENST00000446547 CLP1Q92989 425 aaKnown RBP7.94□□□□□ -1.14
RAB5A-205ENST00000446547 GNEQ9Y223 722 aaKnown RBP7.94□□□□□ -1.14
RAB5A-205ENST00000446547 IQSEC2Q5JU85 1478 aa7.94□□□□□ -1.14
RAB5A-205ENST00000446547 YEATS2Q9ULM3 1422 aa7.93□□□□□ -1.14
RAB5A-205ENST00000446547 SCNN1AP37088 669 aa7.93□□□□□ -1.14
RAB5A-205ENST00000446547 RNFT1Q5M7Z0 435 aa7.93□□□□□ -1.14
RAB5A-205ENST00000446547 CCDC116Q8IYX3 515 aa7.93□□□□□ -1.14
RAB5A-205ENST00000446547 CCER1Q8TC90 406 aaPredicted RBP7.93□□□□□ -1.14
RAB5A-205ENST00000446547 ZNF428Q96B54 188 aa7.93□□□□□ -1.14
RAB5A-205ENST00000446547 PCDHB11Q9Y5F2 797 aa7.93□□□□□ -1.14
RAB5A-205ENST00000446547 DNMT3AQ9Y6K1 912 aaPredicted RBP7.93□□□□□ -1.14
RAB5A-205ENST00000446547 KIAA0586Q9BVV6 1533 aa7.92□□□□□ -1.14
RAB5A-205ENST00000446547 UBAP1LF5GYI3 381 aa7.92□□□□□ -1.14
RAB5A-205ENST00000446547 LGR5O75473 907 aa7.92□□□□□ -1.14
RAB5A-205ENST00000446547 DKK1O94907 266 aa7.92□□□□□ -1.14
RAB5A-205ENST00000446547 ARHGEF15O94989 841 aa7.92□□□□□ -1.14
RAB5A-205ENST00000446547 IGHA1P01876 353 aa7.92□□□□□ -1.14
RAB5A-205ENST00000446547 ATP2B4P23634 1241 aa7.92□□□□□ -1.14
RAB5A-205ENST00000446547 RNF20Q5VTR2 975 aa7.92□□□□□ -1.14
RAB5A-205ENST00000446547 Q6ZVU0 165 aa7.92□□□□□ -1.14
RAB5A-205ENST00000446547 VASH1Q7L8A9 365 aaPredicted RBP7.92□□□□□ -1.14
RAB5A-205ENST00000446547 LARGE2Q8N3Y3 721 aa7.92□□□□□ -1.14
RAB5A-205ENST00000446547 CCDC155Q8N6L0 562 aa7.92□□□□□ -1.14
RAB5A-205ENST00000446547 FHAD1B1AJZ9 1412 aa7.92□□□□□ -1.14
RAB5A-205ENST00000446547 SLC35F4A4IF30 521 aa7.91□□□□□ -1.14
RAB5A-205ENST00000446547 SFI1A8K8P3 1242 aa7.91□□□□□ -1.14
RAB5A-205ENST00000446547 SPINT1O43278 529 aa7.91□□□□□ -1.14
RAB5A-205ENST00000446547 ARID4AP29374 1257 aaPredicted RBP7.91□□□□□ -1.14
RAB5A-205ENST00000446547 PSME1Q06323 249 aa7.91□□□□□ -1.14
RAB5A-205ENST00000446547 CCDC102BQ68D86 513 aa7.91□□□□□ -1.14
RAB5A-205ENST00000446547 SVOPQ8N4V2 548 aa7.91□□□□□ -1.14
RAB5A-205ENST00000446547 ESPNB1AK53 854 aa7.9□□□□□ -1.14
RAB5A-205ENST00000446547 PRMT3O60678 531 aa7.9□□□□□ -1.14
RAB5A-205ENST00000446547 RBM25P49756 843 aaKnown RBP7.9□□□□□ -1.14
RAB5A-205ENST00000446547 NBPF20Q3BBV1 942 aa7.9□□□□□ -1.14
RAB5A-205ENST00000446547 SIX5Q8N196 739 aa7.9□□□□□ -1.14
RAB5A-205ENST00000446547 TPCN2Q8NHX9 752 aa7.9□□□□□ -1.14
RAB5A-205ENST00000446547 PCDHGA11Q9Y5H2 935 aa7.9□□□□□ -1.14
RAB5A-205ENST00000446547 SETD1AO15047 1707 aaKnown RBP7.9□□□□□ -1.15
RAB5A-205ENST00000446547 SEC13P55735 322 aa7.89□□□□□ -1.15
RAB5A-205ENST00000446547 USP4Q13107 963 aa7.89□□□□□ -1.15
RAB5A-205ENST00000446547 SWI5Q1ZZU3 235 aa7.89□□□□□ -1.15
RAB5A-205ENST00000446547 KANK3Q6NY19 840 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms