RNA–Protein interactions for RNA: ENST00000445388.5

SEC22C-208, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22C, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-208ENST00000445388 TAF7Q15545 349 aaPredicted RBP20.26■□□□□ 0.83
SEC22C-208ENST00000445388 CCDC146Q8IYE0 955 aa20.26■□□□□ 0.83
SEC22C-208ENST00000445388 PRAMEF22A3QJZ6 481 aa20.25■□□□□ 0.83
SEC22C-208ENST00000445388 STARD3NLO95772 234 aa20.25■□□□□ 0.83
SEC22C-208ENST00000445388 ADAMTS8Q9UP79 889 aa20.25■□□□□ 0.83
SEC22C-208ENST00000445388 USP42Q9H9J4 1324 aaKnown RBP20.25■□□□□ 0.83
SEC22C-208ENST00000445388 FKBP8Q14318 412 aa20.24■□□□□ 0.83
SEC22C-208ENST00000445388 WDR43Q15061 677 aaKnown RBP eCLIP20.24■□□□□ 0.83
SEC22C-208ENST00000445388 CD2APQ9Y5K6 639 aa20.24■□□□□ 0.83
SEC22C-208ENST00000445388 USP16Q9Y5T5 823 aa20.24■□□□□ 0.83
SEC22C-208ENST00000445388 A1BGP04217 495 aa20.23■□□□□ 0.83
SEC22C-208ENST00000445388 RIPK4P57078 832 aa20.23■□□□□ 0.83
SEC22C-208ENST00000445388 USPL1Q5W0Q7 1092 aa20.23■□□□□ 0.83
SEC22C-208ENST00000445388 PELP1Q8IZL8 1130 aaKnown RBP20.23■□□□□ 0.83
SEC22C-208ENST00000445388 TEX13AQ9BXU3 409 aaPredicted RBP20.23■□□□□ 0.83
SEC22C-208ENST00000445388 TMPOP42166 694 aaKnown RBP20.22■□□□□ 0.83
SEC22C-208ENST00000445388 GPR162Q16538 588 aa20.22■□□□□ 0.83
SEC22C-208ENST00000445388 RRP7AQ9Y3A4 280 aaKnown RBP20.22■□□□□ 0.83
SEC22C-208ENST00000445388 COL15A1P39059 1388 aa20.21■□□□□ 0.83
SEC22C-208ENST00000445388 ZPR1O75312 459 aa20.21■□□□□ 0.83
SEC22C-208ENST00000445388 EIF5P55010 431 aaKnown RBP20.21■□□□□ 0.83
SEC22C-208ENST00000445388 PIP4K2AP48426 406 aaPredicted RBP20.2■□□□□ 0.82
SEC22C-208ENST00000445388 NEUROD2Q15784 382 aa20.2■□□□□ 0.82
SEC22C-208ENST00000445388 CCDC184Q52MB2 194 aa20.2■□□□□ 0.82
SEC22C-208ENST00000445388 NARFQ9UHQ1 456 aa20.2■□□□□ 0.82
SEC22C-208ENST00000445388 PARP3Q9Y6F1 533 aa20.2■□□□□ 0.82
SEC22C-208ENST00000445388 SNRPA1P09661 255 aaKnown RBP20.19■□□□□ 0.82
SEC22C-208ENST00000445388 RUNDC1Q96C34 613 aa20.19■□□□□ 0.82
SEC22C-208ENST00000445388 BCL2L12Q9HB09 334 aa20.19■□□□□ 0.82
SEC22C-208ENST00000445388 ZNF330Q9Y3S2 320 aaPredicted RBP20.19■□□□□ 0.82
SEC22C-208ENST00000445388 YBX3P16989 372 aaKnown RBP eCLIP20.18■□□□□ 0.829e-8■□□□□ 9.4
SEC22C-208ENST00000445388 TM4SF1P30408 202 aa20.18■□□□□ 0.82
SEC22C-208ENST00000445388 DDR1Q08345 913 aa20.18■□□□□ 0.82
SEC22C-208ENST00000445388 WWC3Q9ULE0 1092 aa20.18■□□□□ 0.82
SEC22C-208ENST00000445388 YY1P25490 414 aa20.17■□□□□ 0.82
SEC22C-208ENST00000445388 PNISRQ8TF01 805 aaKnown RBP20.17■□□□□ 0.82
SEC22C-208ENST00000445388 IL6STP40189 918 aaPredicted RBP20.16■□□□□ 0.82
SEC22C-208ENST00000445388 TBC1D2BQ9UPU7 963 aa20.16■□□□□ 0.82
SEC22C-208ENST00000445388 POLRMTO00411 1230 aaKnown RBP20.15■□□□□ 0.82
SEC22C-208ENST00000445388 EIF4A1P60842 406 aaKnown RBP20.15■□□□□ 0.82
SEC22C-208ENST00000445388 KDM3BQ7LBC6 1761 aa20.14■□□□□ 0.81
SEC22C-208ENST00000445388 A0A087WZG4 1122 aa20.14■□□□□ 0.81
SEC22C-208ENST00000445388 NFIXQ14938 502 aa20.14■□□□□ 0.81
SEC22C-208ENST00000445388 TRIM35Q9UPQ4 493 aa20.14■□□□□ 0.81
SEC22C-208ENST00000445388 C10orf71Q711Q0 1435 aa20.13■□□□□ 0.81
SEC22C-208ENST00000445388 A0A0G2JLW4 131 aa20.13■□□□□ 0.81
SEC22C-208ENST00000445388 NBPF26B4DH59 902 aa20.13■□□□□ 0.81
SEC22C-208ENST00000445388 LMOD3Q0VAK6 560 aa20.13■□□□□ 0.81
SEC22C-208ENST00000445388 NBPF10Q6P3W6 841 aaKnown RBP20.13■□□□□ 0.81
SEC22C-208ENST00000445388 NBPF15Q8N660 670 aa20.13■□□□□ 0.81
SEC22C-208ENST00000445388 GIGYF1O75420 1035 aaPredicted RBP20.12■□□□□ 0.81
SEC22C-208ENST00000445388 BICDL1Q6ZP65 573 aa20.12■□□□□ 0.81
SEC22C-208ENST00000445388 TSPYL4Q9UJ04 414 aa20.12■□□□□ 0.81
SEC22C-208ENST00000445388 ANP32CO43423 234 aa20.11■□□□□ 0.81
SEC22C-208ENST00000445388 TGFB2P61812 414 aa20.11■□□□□ 0.81
SEC22C-208ENST00000445388 KIF13BQ9NQT8 1826 aa20.11■□□□□ 0.81
SEC22C-208ENST00000445388 PXDNLA1KZ92 1463 aa20.11■□□□□ 0.81
SEC22C-208ENST00000445388 CAMTA2O94983 1202 aa20.1■□□□□ 0.81
SEC22C-208ENST00000445388 DPEP1P16444 411 aa20.1■□□□□ 0.81
SEC22C-208ENST00000445388 TBC1D9BQ66K14 1250 aa20.1■□□□□ 0.81
SEC22C-208ENST00000445388 NPM2Q86SE8 214 aaKnown RBP20.1■□□□□ 0.81
SEC22C-208ENST00000445388 DZIP3Q86Y13 1208 aaKnown RBP20.1■□□□□ 0.81
SEC22C-208ENST00000445388 UTRNP46939 3433 aa20.1■□□□□ 0.81
SEC22C-208ENST00000445388 KIAA1551Q9HCM1 1747 aa20.1■□□□□ 0.81
SEC22C-208ENST00000445388 N4BP2Q86UW6 1770 aaPredicted RBP20.09■□□□□ 0.81
SEC22C-208ENST00000445388 APAF1O14727 1248 aa20.09■□□□□ 0.81
SEC22C-208ENST00000445388 SERPINB2P05120 415 aa20.09■□□□□ 0.81
SEC22C-208ENST00000445388 GRIN3BO60391 1043 aa20.08■□□□□ 0.81
SEC22C-208ENST00000445388 LAS1LQ9Y4W2 734 aaKnown RBP20.08■□□□□ 0.81
SEC22C-208ENST00000445388 KCNA3P22001 575 aa20.07■□□□□ 0.8
SEC22C-208ENST00000445388 GOLGB1Q14789 3259 aaKnown RBP20.07■□□□□ 0.8
SEC22C-208ENST00000445388 SENP3-EIF4A1A0A087X0R7 540 aa20.06■□□□□ 0.8
SEC22C-208ENST00000445388 CHL1O00533 1208 aa20.06■□□□□ 0.8
SEC22C-208ENST00000445388 NGEFQ8N5V2 710 aa20.06■□□□□ 0.8
SEC22C-208ENST00000445388 BABAM1Q9NWV8 329 aa20.06■□□□□ 0.8
SEC22C-208ENST00000445388 SCN7AQ01118 1682 aa20.06■□□□□ 0.8
SEC22C-208ENST00000445388 LAMB4A4D0S4 1761 aa20.06■□□□□ 0.8
SEC22C-208ENST00000445388 AFDNP55196 1824 aaKnown RBP20.05■□□□□ 0.8
SEC22C-208ENST00000445388 CHRNA5P30532 468 aa20.05■□□□□ 0.8
SEC22C-208ENST00000445388 MRS2Q9HD23 443 aa20.05■□□□□ 0.8
SEC22C-208ENST00000445388 MYL6BP14649 208 aa20.04■□□□□ 0.8
SEC22C-208ENST00000445388 KRT24Q2M2I5 525 aa20.04■□□□□ 0.8
SEC22C-208ENST00000445388 CCDC24Q8N4L8 307 aa20.04■□□□□ 0.8
SEC22C-208ENST00000445388 BCS1LQ9Y276 419 aa20.04■□□□□ 0.8
SEC22C-208ENST00000445388 NRXN2Q9P2S2 1712 aa20.03■□□□□ 0.8
SEC22C-208ENST00000445388 EIF2S2P20042 333 aaKnown RBP20.03■□□□□ 0.8
SEC22C-208ENST00000445388 CHD4Q14839 1912 aa20.03■□□□□ 0.8
SEC22C-208ENST00000445388 HLFQ16534 295 aa20.02■□□□□ 0.8
SEC22C-208ENST00000445388 SETDB2Q96T68 719 aa20.02■□□□□ 0.8
SEC22C-208ENST00000445388 CARMIL3Q8ND23 1372 aa20.02■□□□□ 0.8
SEC22C-208ENST00000445388 BCORQ6W2J9 1755 aa20.02■□□□□ 0.8
SEC22C-208ENST00000445388 TTLL7Q6ZT98 887 aa20.01■□□□□ 0.79
SEC22C-208ENST00000445388 NECTIN2Q92692 538 aa20.01■□□□□ 0.79
SEC22C-208ENST00000445388 PDIA6Q15084 440 aa20■□□□□ 0.79
SEC22C-208ENST00000445388 PRR5LQ6MZQ0 368 aa20■□□□□ 0.79
SEC22C-208ENST00000445388 CLEC4GQ6UXB4 293 aa20■□□□□ 0.79
SEC22C-208ENST00000445388 CFAP44Q96MT7 982 aa20■□□□□ 0.79
SEC22C-208ENST00000445388 PIM2Q9P1W9 311 aa20■□□□□ 0.79
SEC22C-208ENST00000445388 ANXA1P04083 346 aa19.99■□□□□ 0.79
SEC22C-208ENST00000445388 ZNF784Q8NCA9 323 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms