RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 VSIG10Q8N0Z9 540 aa31.47■■■□□ 2.63
C9orf3-207ENST00000445181 PNISRQ8TF01 805 aaKnown RBP31.47■■■□□ 2.63
C9orf3-207ENST00000445181 ZNF496Q96IT1 587 aaPredicted RBP31.47■■■□□ 2.63
C9orf3-207ENST00000445181 FMNL2Q96PY5 1086 aa31.47■■■□□ 2.63
C9orf3-207ENST00000445181 UBR2Q8IWV8 1755 aa31.47■■■□□ 2.63
C9orf3-207ENST00000445181 INTS5Q6P9B9 1019 aaKnown RBP31.46■■■□□ 2.63
C9orf3-207ENST00000445181 KCNQ3O43525 872 aa31.45■■■□□ 2.63
C9orf3-207ENST00000445181 GYS1P13807 737 aa31.44■■■□□ 2.62
C9orf3-207ENST00000445181 YBX3P16989 372 aaKnown RBP eCLIP31.44■■■□□ 2.62
C9orf3-207ENST00000445181 MIS18AQ9NYP9 233 aa31.44■■■□□ 2.62
C9orf3-207ENST00000445181 CICQ96RK0 1608 aaPredicted RBP31.44■■■□□ 2.62
C9orf3-207ENST00000445181 CCDC87Q9NVE4 849 aa31.43■■■□□ 2.62
C9orf3-207ENST00000445181 HEG1Q9ULI3 1381 aa31.43■■■□□ 2.62
C9orf3-207ENST00000445181 APAF1O14727 1248 aa31.42■■■□□ 2.62
C9orf3-207ENST00000445181 CYP19A1P11511 503 aaPredicted RBP31.42■■■□□ 2.62
C9orf3-207ENST00000445181 CHD4Q14839 1912 aa31.4■■■□□ 2.62
C9orf3-207ENST00000445181 GRIN3BO60391 1043 aa31.4■■■□□ 2.62
C9orf3-207ENST00000445181 STARD3NLO95772 234 aa31.4■■■□□ 2.62
C9orf3-207ENST00000445181 TEX13AQ9BXU3 409 aaPredicted RBP31.4■■■□□ 2.62
C9orf3-207ENST00000445181 SRP68Q9UHB9 627 aaKnown RBP31.4■■■□□ 2.62
C9orf3-207ENST00000445181 TRIM35Q9UPQ4 493 aa31.38■■■□□ 2.61
C9orf3-207ENST00000445181 USP42Q9H9J4 1324 aaKnown RBP31.37■■■□□ 2.61
C9orf3-207ENST00000445181 C4AP0C0L4 1744 aa31.37■■■□□ 2.61
C9orf3-207ENST00000445181 SOS1Q07889 1333 aaPredicted RBP31.35■■■□□ 2.61
C9orf3-207ENST00000445181 FAM9BQ8IZU0 186 aa31.35■■■□□ 2.61
C9orf3-207ENST00000445181 ZNF784Q8NCA9 323 aaPredicted RBP31.35■■■□□ 2.61
C9orf3-207ENST00000445181 TSPYL4Q9UJ04 414 aa31.35■■■□□ 2.61
C9orf3-207ENST00000445181 PARP3Q9Y6F1 533 aa31.35■■■□□ 2.61
C9orf3-207ENST00000445181 SNRPA1P09661 255 aaKnown RBP31.34■■■□□ 2.61
C9orf3-207ENST00000445181 FKBP8Q14318 412 aa31.34■■■□□ 2.61
C9orf3-207ENST00000445181 ZPR1O75312 459 aa31.33■■■□□ 2.61
C9orf3-207ENST00000445181 WWC3Q9ULE0 1092 aa31.33■■■□□ 2.61
C9orf3-207ENST00000445181 ZBTB1Q9Y2K1 713 aa31.33■■■□□ 2.61
C9orf3-207ENST00000445181 LAS1LQ9Y4W2 734 aaKnown RBP31.32■■■□□ 2.6
C9orf3-207ENST00000445181 KDM3BQ7LBC6 1761 aa31.32■■■□□ 2.6
C9orf3-207ENST00000445181 CANXP27824 592 aaKnown RBP31.31■■■□□ 2.6
C9orf3-207ENST00000445181 DIEXFQ68CQ4 756 aaKnown RBP31.31■■■□□ 2.6
C9orf3-207ENST00000445181 SENP3-EIF4A1A0A087X0R7 540 aa31.3■■■□□ 2.6
C9orf3-207ENST00000445181 UTRNP46939 3433 aa31.3■■■□□ 2.6
C9orf3-207ENST00000445181 PRAMEF22A3QJZ6 481 aa31.29■■■□□ 2.6
C9orf3-207ENST00000445181 TGFB2P61812 414 aa31.29■■■□□ 2.6
C9orf3-207ENST00000445181 USPL1Q5W0Q7 1092 aa31.29■■■□□ 2.6
C9orf3-207ENST00000445181 BABAM1Q9NWV8 329 aa31.29■■■□□ 2.6
C9orf3-207ENST00000445181 EIF4A1P60842 406 aaKnown RBP31.28■■■□□ 2.6
C9orf3-207ENST00000445181 COL15A1P39059 1388 aa31.28■■■□□ 2.6
C9orf3-207ENST00000445181 C10orf71Q711Q0 1435 aa31.27■■■□□ 2.6
C9orf3-207ENST00000445181 NARFQ9UHQ1 456 aa31.27■■■□□ 2.6
C9orf3-207ENST00000445181 USP16Q9Y5T5 823 aa31.27■■■□□ 2.6
C9orf3-207ENST00000445181 CALD1Q05682 793 aaKnown RBP31.26■■■□□ 2.59
C9orf3-207ENST00000445181 DDR1Q08345 913 aa31.26■■■□□ 2.59
C9orf3-207ENST00000445181 ZNF330Q9Y3S2 320 aaPredicted RBP31.26■■■□□ 2.59
C9orf3-207ENST00000445181 A0A0G2JLW4 131 aa31.25■■■□□ 2.59
C9orf3-207ENST00000445181 A1BGP04217 495 aa31.25■■■□□ 2.59
C9orf3-207ENST00000445181 TM4SF1P30408 202 aa31.25■■■□□ 2.59
C9orf3-207ENST00000445181 NPM2Q86SE8 214 aaKnown RBP31.25■■■□□ 2.59
C9orf3-207ENST00000445181 PXDNLA1KZ92 1463 aa31.25■■■□□ 2.59
C9orf3-207ENST00000445181 KIF13BQ9NQT8 1826 aa31.24■■■□□ 2.59
C9orf3-207ENST00000445181 GIGYF1O75420 1035 aaPredicted RBP31.23■■■□□ 2.59
C9orf3-207ENST00000445181 GOLGB1Q14789 3259 aaKnown RBP31.22■■■□□ 2.59
C9orf3-207ENST00000445181 CHL1O00533 1208 aa31.22■■■□□ 2.59
C9orf3-207ENST00000445181 EIF5P55010 431 aaKnown RBP31.22■■■□□ 2.59
C9orf3-207ENST00000445181 CCER2I3L3R5 266 aa31.21■■■□□ 2.59
C9orf3-207ENST00000445181 DPEP1P16444 411 aa31.21■■■□□ 2.59
C9orf3-207ENST00000445181 CFAP44Q96MT7 982 aa31.21■■■□□ 2.59
C9orf3-207ENST00000445181 A0A087WZG4 1122 aa31.2■■■□□ 2.59
C9orf3-207ENST00000445181 POLRMTO00411 1230 aaKnown RBP31.2■■■□□ 2.59
C9orf3-207ENST00000445181 IL6STP40189 918 aaPredicted RBP31.2■■■□□ 2.59
C9orf3-207ENST00000445181 BCL2L12Q9HB09 334 aa31.2■■■□□ 2.59
C9orf3-207ENST00000445181 PIP4K2AP48426 406 aaPredicted RBP31.19■■■□□ 2.58
C9orf3-207ENST00000445181 NFIXQ14938 502 aa31.19■■■□□ 2.58
C9orf3-207ENST00000445181 SALL2Q9Y467 1007 aaPredicted RBP31.19■■■□□ 2.58
C9orf3-207ENST00000445181 N4BP2Q86UW6 1770 aaPredicted RBP31.19■■■□□ 2.58
C9orf3-207ENST00000445181 KIAA1551Q9HCM1 1747 aa31.18■■■□□ 2.58
C9orf3-207ENST00000445181 CCDC27Q2M243 656 aa31.18■■■□□ 2.58
C9orf3-207ENST00000445181 IFT57Q9NWB7 429 aa31.18■■■□□ 2.58
C9orf3-207ENST00000445181 LAMB4A4D0S4 1761 aa31.17■■■□□ 2.58
C9orf3-207ENST00000445181 GNAI1P63096 354 aa31.17■■■□□ 2.58
C9orf3-207ENST00000445181 BCS1LQ9Y276 419 aa31.17■■■□□ 2.58
C9orf3-207ENST00000445181 WWC1Q8IX03 1113 aa31.15■■■□□ 2.58
C9orf3-207ENST00000445181 KCNA3P22001 575 aa31.14■■■□□ 2.58
C9orf3-207ENST00000445181 NCBP3Q53F19 620 aaKnown RBP31.14■■■□□ 2.58
C9orf3-207ENST00000445181 MBIPQ9NS73 344 aa31.14■■■□□ 2.58
C9orf3-207ENST00000445181 TBC1D2BQ9UPU7 963 aa31.14■■■□□ 2.58
C9orf3-207ENST00000445181 ZNF853P0CG23 659 aa31.13■■■□□ 2.57
C9orf3-207ENST00000445181 EIF2S2P20042 333 aaKnown RBP31.13■■■□□ 2.57
C9orf3-207ENST00000445181 NBPF26B4DH59 902 aa31.11■■■□□ 2.57
C9orf3-207ENST00000445181 SERPINB2P05120 415 aa31.11■■■□□ 2.57
C9orf3-207ENST00000445181 NBPF10Q6P3W6 841 aaKnown RBP31.11■■■□□ 2.57
C9orf3-207ENST00000445181 BICDL1Q6ZP65 573 aa31.11■■■□□ 2.57
C9orf3-207ENST00000445181 MIER1Q8N108 512 aa31.11■■■□□ 2.57
C9orf3-207ENST00000445181 NBPF15Q8N660 670 aa31.11■■■□□ 2.57
C9orf3-207ENST00000445181 KRT24Q2M2I5 525 aa31.1■■■□□ 2.57
C9orf3-207ENST00000445181 DZIP3Q86Y13 1208 aaKnown RBP31.1■■■□□ 2.57
C9orf3-207ENST00000445181 PIM2Q9P1W9 311 aa31.1■■■□□ 2.57
C9orf3-207ENST00000445181 CHRNA5P30532 468 aa31.09■■■□□ 2.57
C9orf3-207ENST00000445181 MYL6BP14649 208 aa31.07■■■□□ 2.56
C9orf3-207ENST00000445181 TBC1D9BQ66K14 1250 aa31.07■■■□□ 2.56
C9orf3-207ENST00000445181 ARHGAP27Q6ZUM4 889 aa31.07■■■□□ 2.56
C9orf3-207ENST00000445181 NGEFQ8N5V2 710 aa31.07■■■□□ 2.56
C9orf3-207ENST00000445181 NECTIN2Q92692 538 aa31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms