RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 FMNL2Q96PY5 1086 aa28.86■■■□□ 2.21
TRAF4-205ENST00000444415 RRP7AQ9Y3A4 280 aaKnown RBP28.86■■■□□ 2.21
TRAF4-205ENST00000444415 RIPK4P57078 832 aa28.85■■■□□ 2.21
TRAF4-205ENST00000444415 RUNDC1Q96C34 613 aa28.85■■■□□ 2.21
TRAF4-205ENST00000444415 GYS1P13807 737 aa28.85■■■□□ 2.21
TRAF4-205ENST00000444415 SRP68Q9UHB9 627 aaKnown RBP28.84■■■□□ 2.21
TRAF4-205ENST00000444415 USP42Q9H9J4 1324 aaKnown RBP28.82■■■□□ 2.2
TRAF4-205ENST00000444415 TRIM35Q9UPQ4 493 aa28.82■■■□□ 2.2
TRAF4-205ENST00000444415 LAMB4A4D0S4 1761 aa28.82■■■□□ 2.2
TRAF4-205ENST00000444415 COL15A1P39059 1388 aa28.82■■■□□ 2.2
TRAF4-205ENST00000444415 USP16Q9Y5T5 823 aa28.81■■■□□ 2.2
TRAF4-205ENST00000444415 ANP32CO43423 234 aa28.8■■■□□ 2.2
TRAF4-205ENST00000444415 RFC4P35249 363 aa28.8■■■□□ 2.2
TRAF4-205ENST00000444415 STARD3NLO95772 234 aa28.78■■■□□ 2.2
TRAF4-205ENST00000444415 NEUROD2Q15784 382 aa28.78■■■□□ 2.2
TRAF4-205ENST00000444415 NLGN2Q8NFZ4 835 aa28.78■■■□□ 2.2
TRAF4-205ENST00000444415 CANXP27824 592 aaKnown RBP28.78■■■□□ 2.2
TRAF4-205ENST00000444415 EIF5P55010 431 aaKnown RBP28.78■■■□□ 2.2
TRAF4-205ENST00000444415 TEX13AQ9BXU3 409 aaPredicted RBP28.78■■■□□ 2.2
TRAF4-205ENST00000444415 KIF13BQ9NQT8 1826 aa28.77■■■□□ 2.2
TRAF4-205ENST00000444415 A1BGP04217 495 aa28.77■■■□□ 2.2
TRAF4-205ENST00000444415 MMP10P09238 476 aa28.76■■■□□ 2.19
TRAF4-205ENST00000444415 FKBP8Q14318 412 aa28.76■■■□□ 2.19
TRAF4-205ENST00000444415 PNISRQ8TF01 805 aaKnown RBP28.76■■■□□ 2.19
TRAF4-205ENST00000444415 SCN7AQ01118 1682 aa28.75■■■□□ 2.19
TRAF4-205ENST00000444415 KIAA1551Q9HCM1 1747 aa28.75■■■□□ 2.19
TRAF4-205ENST00000444415 SNRPA1P09661 255 aaKnown RBP28.75■■■□□ 2.19
TRAF4-205ENST00000444415 EIF4A1P60842 406 aaKnown RBP28.75■■■□□ 2.19
TRAF4-205ENST00000444415 KLHL34Q8N239 644 aa28.75■■■□□ 2.19
TRAF4-205ENST00000444415 BCL2L12Q9HB09 334 aa28.75■■■□□ 2.19
TRAF4-205ENST00000444415 NLGN1Q8N2Q7 840 aa28.74■■■□□ 2.19
TRAF4-205ENST00000444415 PIP4K2AP48426 406 aaPredicted RBP28.73■■■□□ 2.19
TRAF4-205ENST00000444415 USPL1Q5W0Q7 1092 aa28.73■■■□□ 2.19
TRAF4-205ENST00000444415 APAF1O14727 1248 aa28.72■■■□□ 2.19
TRAF4-205ENST00000444415 LMOD3Q0VAK6 560 aa28.72■■■□□ 2.19
TRAF4-205ENST00000444415 NARFQ9UHQ1 456 aa28.72■■■□□ 2.19
TRAF4-205ENST00000444415 BCORQ6W2J9 1755 aa28.72■■■□□ 2.19
TRAF4-205ENST00000444415 MRS2Q9HD23 443 aa28.72■■■□□ 2.19
TRAF4-205ENST00000444415 GIGYF1O75420 1035 aaPredicted RBP28.71■■■□□ 2.19
TRAF4-205ENST00000444415 IL6STP40189 918 aaPredicted RBP28.71■■■□□ 2.19
TRAF4-205ENST00000444415 NBPF26B4DH59 902 aa28.7■■■□□ 2.18
TRAF4-205ENST00000444415 DDR1Q08345 913 aa28.7■■■□□ 2.18
TRAF4-205ENST00000444415 NBPF10Q6P3W6 841 aaKnown RBP28.7■■■□□ 2.18
TRAF4-205ENST00000444415 NBPF15Q8N660 670 aa28.7■■■□□ 2.18
TRAF4-205ENST00000444415 AFDNP55196 1824 aaKnown RBP28.7■■■□□ 2.18
TRAF4-205ENST00000444415 TSPYL4Q9UJ04 414 aa28.69■■■□□ 2.18
TRAF4-205ENST00000444415 CD2APQ9Y5K6 639 aa28.69■■■□□ 2.18
TRAF4-205ENST00000444415 C10orf71Q711Q0 1435 aa28.68■■■□□ 2.18
TRAF4-205ENST00000444415 NRXN2Q9P2S2 1712 aa28.67■■■□□ 2.18
TRAF4-205ENST00000444415 TM4SF1P30408 202 aa28.67■■■□□ 2.18
TRAF4-205ENST00000444415 ZPR1O75312 459 aa28.66■■■□□ 2.18
TRAF4-205ENST00000444415 BABAM1Q9NWV8 329 aa28.66■■■□□ 2.18
TRAF4-205ENST00000444415 CHL1O00533 1208 aa28.66■■■□□ 2.18
TRAF4-205ENST00000444415 N4BP2Q86UW6 1770 aaPredicted RBP28.65■■■□□ 2.18
TRAF4-205ENST00000444415 POLRMTO00411 1230 aaKnown RBP28.65■■■□□ 2.18
TRAF4-205ENST00000444415 TBC1D2BQ9UPU7 963 aa28.65■■■□□ 2.18
TRAF4-205ENST00000444415 ZNF330Q9Y3S2 320 aaPredicted RBP28.65■■■□□ 2.18
TRAF4-205ENST00000444415 SENP3-EIF4A1A0A087X0R7 540 aa28.63■■■□□ 2.17
TRAF4-205ENST00000444415 NFIXQ14938 502 aa28.63■■■□□ 2.17
TRAF4-205ENST00000444415 CAMTA2O94983 1202 aa28.62■■■□□ 2.17
TRAF4-205ENST00000444415 KRT24Q2M2I5 525 aa28.62■■■□□ 2.17
TRAF4-205ENST00000444415 PXDNLA1KZ92 1463 aa28.62■■■□□ 2.17
TRAF4-205ENST00000444415 A0A087WZG4 1122 aa28.61■■■□□ 2.17
TRAF4-205ENST00000444415 PARP3Q9Y6F1 533 aa28.61■■■□□ 2.17
TRAF4-205ENST00000444415 BRCA1P38398 1863 aaKnown RBP28.61■■■□□ 2.17
TRAF4-205ENST00000444415 ZNF853P0CG23 659 aa28.59■■■□□ 2.17
TRAF4-205ENST00000444415 YBX3P16989 372 aaKnown RBP eCLIP28.59■■■□□ 2.172e-7■■□□□ 13.8
TRAF4-205ENST00000444415 TBC1D9BQ66K14 1250 aa28.58■■■□□ 2.17
TRAF4-205ENST00000444415 DZIP3Q86Y13 1208 aaKnown RBP28.58■■■□□ 2.17
TRAF4-205ENST00000444415 LAS1LQ9Y4W2 734 aaKnown RBP28.58■■■□□ 2.17
TRAF4-205ENST00000444415 CFAP44Q96MT7 982 aa28.57■■■□□ 2.16
TRAF4-205ENST00000444415 LRP10Q7Z4F1 713 aa28.56■■■□□ 2.16
TRAF4-205ENST00000444415 PDIA6Q15084 440 aa28.55■■■□□ 2.16
TRAF4-205ENST00000444415 MBIPQ9NS73 344 aa28.55■■■□□ 2.16
TRAF4-205ENST00000444415 CHD4Q14839 1912 aa28.54■■■□□ 2.16
TRAF4-205ENST00000444415 ANKRD31Q8N7Z5 1873 aa28.54■■■□□ 2.16
TRAF4-205ENST00000444415 CARMIL3Q8ND23 1372 aa28.53■■■□□ 2.16
TRAF4-205ENST00000444415 NUP98P52948 1817 aa28.53■■■□□ 2.16
TRAF4-205ENST00000444415 BICDL1Q6ZP65 573 aa28.53■■■□□ 2.16
TRAF4-205ENST00000444415 WWC3Q9ULE0 1092 aa28.53■■■□□ 2.16
TRAF4-205ENST00000444415 GPR162Q16538 588 aa28.52■■■□□ 2.16
TRAF4-205ENST00000444415 CCDC27Q2M243 656 aa28.52■■■□□ 2.16
TRAF4-205ENST00000444415 PROSER3Q2NL68 480 aa28.52■■■□□ 2.16
TRAF4-205ENST00000444415 IFT57Q9NWB7 429 aa28.52■■■□□ 2.16
TRAF4-205ENST00000444415 SERPINB2P05120 415 aa28.51■■■□□ 2.15
TRAF4-205ENST00000444415 PELP1Q8IZL8 1130 aaKnown RBP28.51■■■□□ 2.15
TRAF4-205ENST00000444415 ERBB4Q15303 1308 aa28.51■■■□□ 2.15
TRAF4-205ENST00000444415 A0A0G2JLW4 131 aa28.5■■■□□ 2.15
TRAF4-205ENST00000444415 MYL6BP14649 208 aa28.5■■■□□ 2.15
TRAF4-205ENST00000444415 EIF2S2P20042 333 aaKnown RBP28.5■■■□□ 2.15
TRAF4-205ENST00000444415 KCNA3P22001 575 aa28.5■■■□□ 2.15
TRAF4-205ENST00000444415 TGFB2P61812 414 aa28.5■■■□□ 2.15
TRAF4-205ENST00000444415 TTLL7Q6ZT98 887 aa28.5■■■□□ 2.15
TRAF4-205ENST00000444415 WWC1Q8IX03 1113 aa28.5■■■□□ 2.15
TRAF4-205ENST00000444415 DCAF8L1A6NGE4 600 aa28.49■■■□□ 2.15
TRAF4-205ENST00000444415 ANXA1P04083 346 aa28.49■■■□□ 2.15
TRAF4-205ENST00000444415 HLFQ16534 295 aa28.49■■■□□ 2.15
TRAF4-205ENST00000444415 FAM9BQ8IZU0 186 aa28.49■■■□□ 2.15
TRAF4-205ENST00000444415 DPEP1P16444 411 aa28.48■■■□□ 2.15
TRAF4-205ENST00000444415 NPM2Q86SE8 214 aaKnown RBP28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms