RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 MAP3K10Q02779 954 aa9.56□□□□□ -0.88
VPS50-206ENST00000443443 C1orf216Q8TAB5 229 aa9.56□□□□□ -0.88
VPS50-206ENST00000443443 CFHR5Q9BXR6 569 aa9.56□□□□□ -0.88
VPS50-206ENST00000443443 GJA3Q9Y6H8 435 aa9.56□□□□□ -0.88
VPS50-206ENST00000443443 GSK3AP49840 483 aa9.55□□□□□ -0.88
VPS50-206ENST00000443443 LARP1Q6PKG0 1096 aaKnown RBP9.55□□□□□ -0.88
VPS50-206ENST00000443443 LYPD4Q6UWN0 246 aa9.55□□□□□ -0.88
VPS50-206ENST00000443443 BICDL1Q6ZP65 573 aa9.55□□□□□ -0.88
VPS50-206ENST00000443443 SLC9A9Q8IVB4 645 aa9.55□□□□□ -0.88
VPS50-206ENST00000443443 L3MBTL2Q969R5 705 aa9.55□□□□□ -0.88
VPS50-206ENST00000443443 CRISPLD1Q9H336 500 aa9.55□□□□□ -0.88
VPS50-206ENST00000443443 ADAMTS8Q9UP79 889 aa9.55□□□□□ -0.88
VPS50-206ENST00000443443 A0A1W2PNR3 127 aa9.54□□□□□ -0.88
VPS50-206ENST00000443443 SFI1A8K8P3 1242 aa9.54□□□□□ -0.88
VPS50-206ENST00000443443 ABHD17AQ96GS6 310 aa9.54□□□□□ -0.88
VPS50-206ENST00000443443 CELA2BP08218 269 aaPredicted RBP9.53□□□□□ -0.88
VPS50-206ENST00000443443 ATP4AP20648 1035 aa9.53□□□□□ -0.88
VPS50-206ENST00000443443 NOS2P35228 1153 aa9.53□□□□□ -0.88
VPS50-206ENST00000443443 FIGNL1Q6PIW4 674 aa9.53□□□□□ -0.88
VPS50-206ENST00000443443 ZCCHC2Q9C0B9 1178 aaKnown RBP9.53□□□□□ -0.88
VPS50-206ENST00000443443 VRTNQ9H8Y1 702 aa9.53□□□□□ -0.88
VPS50-206ENST00000443443 SERTM1A2A2V5 107 aa9.52□□□□□ -0.89
VPS50-206ENST00000443443 BNIP3LO60238 219 aa9.52□□□□□ -0.89
VPS50-206ENST00000443443 EPHA4P54764 986 aa9.52□□□□□ -0.89
VPS50-206ENST00000443443 MARSP56192 900 aaKnown RBP9.52□□□□□ -0.89
VPS50-206ENST00000443443 ZNF295-AS1Q8N0V1 137 aa9.52□□□□□ -0.89
VPS50-206ENST00000443443 TSEN2Q8NCE0 465 aaKnown RBP9.52□□□□□ -0.89
VPS50-206ENST00000443443 NEUROD4Q9HD90 331 aa9.52□□□□□ -0.89
VPS50-206ENST00000443443 ENAMQ9NRM1 1142 aa9.52□□□□□ -0.89
VPS50-206ENST00000443443 ZDHHC3Q9NYG2 299 aa9.52□□□□□ -0.89
VPS50-206ENST00000443443 CHMP3Q9Y3E7 222 aa9.52□□□□□ -0.89
VPS50-206ENST00000443443 PCDHGC4Q9Y5F7 938 aa9.52□□□□□ -0.89
VPS50-206ENST00000443443 TXLNAP40222 546 aa9.51□□□□□ -0.89
VPS50-206ENST00000443443 FOXK2Q01167 660 aa9.51□□□□□ -0.89
VPS50-206ENST00000443443 UBAP2LQ14157 1087 aaKnown RBP9.51□□□□□ -0.89
VPS50-206ENST00000443443 TEAD4Q15561 434 aa9.51□□□□□ -0.89
VPS50-206ENST00000443443 NLRP8Q86W28 1048 aa9.51□□□□□ -0.89
VPS50-206ENST00000443443 SIX5Q8N196 739 aa9.51□□□□□ -0.89
VPS50-206ENST00000443443 ZDHHC1Q8WTX9 485 aa9.51□□□□□ -0.89
VPS50-206ENST00000443443 HINFPQ9BQA5 517 aa9.51□□□□□ -0.89
VPS50-206ENST00000443443 TSPAN10Q9H1Z9 355 aaPredicted RBP9.51□□□□□ -0.89
VPS50-206ENST00000443443 ATXN7L1Q9ULK2 861 aaPredicted RBP9.51□□□□□ -0.89
VPS50-206ENST00000443443 GTF3C3Q9Y5Q9 886 aa9.51□□□□□ -0.89
VPS50-206ENST00000443443 ATXN7O15265 892 aaPredicted RBP9.5□□□□□ -0.89
VPS50-206ENST00000443443 FGFR3P22607 806 aa9.5□□□□□ -0.89
VPS50-206ENST00000443443 RFX1P22670 979 aa9.5□□□□□ -0.89
VPS50-206ENST00000443443 SEC13P55735 322 aa9.5□□□□□ -0.89
VPS50-206ENST00000443443 KCNMA1Q12791 1236 aa9.5□□□□□ -0.89
VPS50-206ENST00000443443 ACDQ96AP0 544 aa9.5□□□□□ -0.89
VPS50-206ENST00000443443 ZIC5Q96T25 663 aa9.5□□□□□ -0.89
VPS50-206ENST00000443443 ZMYND15Q9H091 742 aa9.5□□□□□ -0.89
VPS50-206ENST00000443443 BCRP11274 1271 aa9.49□□□□□ -0.89
VPS50-206ENST00000443443 BMP4P12644 408 aa9.49□□□□□ -0.89
VPS50-206ENST00000443443 MAP2K3P46734 347 aa9.49□□□□□ -0.89
VPS50-206ENST00000443443 CRTC2Q53ET0 693 aaPredicted RBP9.49□□□□□ -0.89
VPS50-206ENST00000443443 CDCA8Q53HL2 280 aa9.49□□□□□ -0.89
VPS50-206ENST00000443443 KANK4Q5T7N3 995 aaPredicted RBP9.49□□□□□ -0.89
VPS50-206ENST00000443443 NEDD1Q8NHV4 660 aa9.49□□□□□ -0.89
VPS50-206ENST00000443443 HCN4Q9Y3Q4 1203 aa9.49□□□□□ -0.89
VPS50-206ENST00000443443 M0R2N6 131 aa9.48□□□□□ -0.89
VPS50-206ENST00000443443 KHNYNO15037 678 aaKnown RBP9.48□□□□□ -0.89
VPS50-206ENST00000443443 PPP1R12BO60237 982 aaPredicted RBP9.48□□□□□ -0.89
VPS50-206ENST00000443443 ARHGEF15O94989 841 aa9.48□□□□□ -0.89
VPS50-206ENST00000443443 PSMA6P60900 246 aaKnown RBP9.48□□□□□ -0.89
VPS50-206ENST00000443443 CTBSQ01459 385 aa9.48□□□□□ -0.89
VPS50-206ENST00000443443 DPYDQ12882 1025 aa9.48□□□□□ -0.89
VPS50-206ENST00000443443 KCTD17Q8N5Z5 321 aa9.48□□□□□ -0.89
VPS50-206ENST00000443443 CHMP7Q8WUX9 453 aaPredicted RBP9.48□□□□□ -0.89
VPS50-206ENST00000443443 KLRG1Q96E93 195 aa9.48□□□□□ -0.89
VPS50-206ENST00000443443 DCDC2BA2VCK2 349 aa9.47□□□□□ -0.89
VPS50-206ENST00000443443 LGR5O75473 907 aa9.47□□□□□ -0.89
VPS50-206ENST00000443443 PTK7Q13308 1070 aa9.47□□□□□ -0.89
VPS50-206ENST00000443443 SH3PXD2AQ5TCZ1 1133 aa9.47□□□□□ -0.89
VPS50-206ENST00000443443 OXCT2Q9BYC2 517 aaPredicted RBP9.47□□□□□ -0.89
VPS50-206ENST00000443443 ATAD2Q6PL18 1390 aa9.47□□□□□ -0.89
VPS50-206ENST00000443443 DKK1O94907 266 aa9.46□□□□□ -0.9
VPS50-206ENST00000443443 LRRC69Q6ZNQ3 347 aa9.46□□□□□ -0.9
VPS50-206ENST00000443443 ANKMY2Q8IV38 441 aa9.46□□□□□ -0.9
VPS50-206ENST00000443443 SCG3Q8WXD2 468 aaKnown RBP9.46□□□□□ -0.9
VPS50-206ENST00000443443 NDFIP2Q9NV92 336 aa9.46□□□□□ -0.9
VPS50-206ENST00000443443 USP17L15C9J2P7 530 aa9.45□□□□□ -0.9
VPS50-206ENST00000443443 USP17L10C9JJH3 530 aa9.45□□□□□ -0.9
VPS50-206ENST00000443443 USP17L13C9JLJ4 530 aa9.45□□□□□ -0.9
VPS50-206ENST00000443443 USP17L12C9JPN9 530 aa9.45□□□□□ -0.9
VPS50-206ENST00000443443 USP17L11C9JVI0 530 aa9.45□□□□□ -0.9
VPS50-206ENST00000443443 USP17L21D6R901 530 aa9.45□□□□□ -0.9
VPS50-206ENST00000443443 USP17L18D6R9N7 530 aa9.45□□□□□ -0.9
VPS50-206ENST00000443443 USP17L22D6RA61 530 aa9.45□□□□□ -0.9
VPS50-206ENST00000443443 USP17L17D6RBQ6 530 aa9.45□□□□□ -0.9
VPS50-206ENST00000443443 USP17L19D6RCP7 530 aa9.45□□□□□ -0.9
VPS50-206ENST00000443443 USP17L20D6RJB6 530 aa9.45□□□□□ -0.9
VPS50-206ENST00000443443 EML1O00423 815 aa9.45□□□□□ -0.9
VPS50-206ENST00000443443 C2CD2LO14523 706 aa9.45□□□□□ -0.9
VPS50-206ENST00000443443 MAPTP10636 758 aaKnown RBP9.45□□□□□ -0.9
VPS50-206ENST00000443443 USP17L24Q0WX57 530 aa9.45□□□□□ -0.9
VPS50-206ENST00000443443 RHPN1Q8TCX5 695 aa9.45□□□□□ -0.9
VPS50-206ENST00000443443 FAM196BA6NMK8 535 aa9.44□□□□□ -0.9
VPS50-206ENST00000443443 TNP2Q05952 138 aa9.44□□□□□ -0.9
VPS50-206ENST00000443443 CFAP70Q5T0N1 1121 aa9.44□□□□□ -0.9
VPS50-206ENST00000443443 GALNT6Q8NCL4 622 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms