RNA–Protein interactions for RNA: ENST00000443203.5

NELFA-208, Transcript of negative elongation factor complex member A, humanhuman

TSL 4

Gene NELFA, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-208ENST00000443203 MYH16Q9H6N6 1097 aa18.31■□□□□ 0.52
NELFA-208ENST00000443203 ITGB4P16144 1822 aa18.3■□□□□ 0.52
NELFA-208ENST00000443203 ZBED9Q6R2W3 1325 aa18.3■□□□□ 0.52
NELFA-208ENST00000443203 ZNF853P0CG23 659 aa18.3■□□□□ 0.52
NELFA-208ENST00000443203 YTHDC1Q96MU7 727 aaKnown RBP18.3■□□□□ 0.52
NELFA-208ENST00000443203 FMNL2Q96PY5 1086 aa18.3■□□□□ 0.52
NELFA-208ENST00000443203 E9PSI1 815 aa18.29■□□□□ 0.52
NELFA-208ENST00000443203 PTCD1O75127 700 aaKnown RBP18.29■□□□□ 0.52
NELFA-208ENST00000443203 MBIPQ9NS73 344 aa18.29■□□□□ 0.52
NELFA-208ENST00000443203 LOC102724428A0A0B4J2F2 783 aa18.28■□□□□ 0.52
NELFA-208ENST00000443203 KCNQ3O43525 872 aa18.28■□□□□ 0.52
NELFA-208ENST00000443203 PHF14O94880 888 aa18.28■□□□□ 0.52
NELFA-208ENST00000443203 SIK1P57059 783 aa18.28■□□□□ 0.52
NELFA-208ENST00000443203 C4BP0C0L5 1744 aa18.28■□□□□ 0.52
NELFA-208ENST00000443203 VIRMAQ69YN4 1812 aaKnown RBP18.28■□□□□ 0.52
NELFA-208ENST00000443203 TAF1LQ8IZX4 1826 aa18.28■□□□□ 0.52
NELFA-208ENST00000443203 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.27■□□□□ 0.52
NELFA-208ENST00000443203 SSFA2P28290 1259 aa18.27■□□□□ 0.52
NELFA-208ENST00000443203 ATP6V1AP38606 617 aa18.27■□□□□ 0.52
NELFA-208ENST00000443203 EIF4A1P60842 406 aaKnown RBP18.27■□□□□ 0.52
NELFA-208ENST00000443203 IFFO2Q5TF58 517 aa18.27■□□□□ 0.52
NELFA-208ENST00000443203 VSIG10Q8N0Z9 540 aa18.27■□□□□ 0.52
NELFA-208ENST00000443203 ZNF496Q96IT1 587 aaPredicted RBP18.27■□□□□ 0.52
NELFA-208ENST00000443203 TEX13AQ9BXU3 409 aaPredicted RBP18.26■□□□□ 0.51
NELFA-208ENST00000443203 SNRPA1P09661 255 aaKnown RBP18.25■□□□□ 0.51
NELFA-208ENST00000443203 SLFN5Q08AF3 891 aa18.25■□□□□ 0.51
NELFA-208ENST00000443203 SIPA1L3O60292 1781 aaPredicted RBP18.25■□□□□ 0.51
NELFA-208ENST00000443203 ATP10DQ9P241 1426 aa18.24■□□□□ 0.51
NELFA-208ENST00000443203 AMIGO3Q86WK7 504 aa18.24■□□□□ 0.51
NELFA-208ENST00000443203 TSR2Q969E8 191 aaKnown RBP18.24■□□□□ 0.51
NELFA-208ENST00000443203 SPINK5Q9NQ38 1064 aaPredicted RBP18.24■□□□□ 0.51
NELFA-208ENST00000443203 HEG1Q9ULI3 1381 aa18.24■□□□□ 0.51
NELFA-208ENST00000443203 FANCIQ9NVI1 1328 aa18.23■□□□□ 0.51
NELFA-208ENST00000443203 LINC00116Q8NCU8 138 aa18.23■□□□□ 0.51
NELFA-208ENST00000443203 CDCA7LQ96GN5 454 aa18.23■□□□□ 0.51
NELFA-208ENST00000443203 GNPATO15228 680 aa18.22■□□□□ 0.51
NELFA-208ENST00000443203 STARD3NLO95772 234 aa18.22■□□□□ 0.51
NELFA-208ENST00000443203 CHMP4AQ9BY43 222 aa18.22■□□□□ 0.51
NELFA-208ENST00000443203 SMIM5Q71RC9 77 aa18.21■□□□□ 0.51
NELFA-208ENST00000443203 DNAJC10Q8IXB1 793 aa18.21■□□□□ 0.51
NELFA-208ENST00000443203 SLC4A9Q96Q91 983 aa18.21■□□□□ 0.51
NELFA-208ENST00000443203 GPBP1L1Q9HC44 474 aaPredicted RBP18.21■□□□□ 0.51
NELFA-208ENST00000443203 UBR3Q6ZT12 1888 aa18.2■□□□□ 0.5
NELFA-208ENST00000443203 KCPQ6ZWJ8 1503 aa18.2■□□□□ 0.5
NELFA-208ENST00000443203 HOXB7P09629 217 aa18.2■□□□□ 0.5
NELFA-208ENST00000443203 ITPK1Q13572 414 aa18.2■□□□□ 0.5
NELFA-208ENST00000443203 DUSP27Q5VZP5 1158 aa18.2■□□□□ 0.5
NELFA-208ENST00000443203 SOS1Q07889 1333 aaPredicted RBP18.2■□□□□ 0.5
NELFA-208ENST00000443203 EXOSC9Q06265 439 aaKnown RBP18.19■□□□□ 0.5
NELFA-208ENST00000443203 TRMT2AQ8IZ69 625 aaKnown RBP18.19■□□□□ 0.5
NELFA-208ENST00000443203 KDM3BQ7LBC6 1761 aa18.19■□□□□ 0.5
NELFA-208ENST00000443203 ADCY9O60503 1353 aa18.18■□□□□ 0.5
NELFA-208ENST00000443203 ELL2O00472 640 aaPredicted RBP18.18■□□□□ 0.5
NELFA-208ENST00000443203 C8orf58Q8NAV2 365 aa18.18■□□□□ 0.5
NELFA-208ENST00000443203 EIF2S2P20042 333 aaKnown RBP18.17■□□□□ 0.5
NELFA-208ENST00000443203 KRT24Q2M2I5 525 aa18.17■□□□□ 0.5
NELFA-208ENST00000443203 TWISTNBQ3B726 338 aaPredicted RBP18.17■□□□□ 0.5
NELFA-208ENST00000443203 TRAPPC3LQ5T215 181 aa18.17■□□□□ 0.5
NELFA-208ENST00000443203 WWC3Q9ULE0 1092 aa18.17■□□□□ 0.5
NELFA-208ENST00000443203 RTCBQ9Y3I0 505 aaKnown RBP18.17■□□□□ 0.5
NELFA-208ENST00000443203 USP16Q9Y5T5 823 aa18.17■□□□□ 0.5
NELFA-208ENST00000443203 PRAMEF22A3QJZ6 481 aa18.16■□□□□ 0.5
NELFA-208ENST00000443203 MMP10P09238 476 aa18.16■□□□□ 0.5
NELFA-208ENST00000443203 CYP19A1P11511 503 aaPredicted RBP18.16■□□□□ 0.5
NELFA-208ENST00000443203 RC3H1Q5TC82 1133 aaKnown RBP18.16■□□□□ 0.5
NELFA-208ENST00000443203 ZNF526Q8TF50 670 aaPredicted RBP18.16■□□□□ 0.5
NELFA-208ENST00000443203 UBR2Q8IWV8 1755 aa18.15■□□□□ 0.5
NELFA-208ENST00000443203 HDGFL1Q5TGJ6 251 aa18.15■□□□□ 0.5
NELFA-208ENST00000443203 NPM2Q86SE8 214 aaKnown RBP18.15■□□□□ 0.5
NELFA-208ENST00000443203 NLGN1Q8N2Q7 840 aa18.15■□□□□ 0.5
NELFA-208ENST00000443203 CT47B1P0C2W7 299 aaPredicted RBP18.14■□□□□ 0.49
NELFA-208ENST00000443203 HSPA6P17066 643 aa18.14■□□□□ 0.49
NELFA-208ENST00000443203 ADRA2BP18089 450 aa18.14■□□□□ 0.49
NELFA-208ENST00000443203 TSPYL6Q8N831 410 aa18.14■□□□□ 0.49
NELFA-208ENST00000443203 CCDC87Q9NVE4 849 aa18.14■□□□□ 0.49
NELFA-208ENST00000443203 CNTNAP4Q9C0A0 1308 aa18.14■□□□□ 0.49
NELFA-208ENST00000443203 VAMP4O75379 141 aa18.13■□□□□ 0.49
NELFA-208ENST00000443203 CRKLP46109 303 aaKnown RBP18.13■□□□□ 0.49
NELFA-208ENST00000443203 TGFB2P61812 414 aa18.13■□□□□ 0.49
NELFA-208ENST00000443203 CCDC30Q5VVM6 783 aa18.13■□□□□ 0.49
NELFA-208ENST00000443203 ZNF831Q5JPB2 1677 aa18.12■□□□□ 0.49
NELFA-208ENST00000443203 A1BGP04217 495 aa18.12■□□□□ 0.49
NELFA-208ENST00000443203 NECTIN2Q92692 538 aa18.12■□□□□ 0.49
NELFA-208ENST00000443203 ZNF428Q96B54 188 aa18.12■□□□□ 0.49
NELFA-208ENST00000443203 ERBB4Q15303 1308 aa18.12■□□□□ 0.49
NELFA-208ENST00000443203 CANXP27824 592 aaKnown RBP18.11■□□□□ 0.49
NELFA-208ENST00000443203 RFC4P35249 363 aa18.11■□□□□ 0.49
NELFA-208ENST00000443203 INTS5Q6P9B9 1019 aaKnown RBP18.11■□□□□ 0.49
NELFA-208ENST00000443203 ARHGEF1Q92888 912 aaKnown RBP18.11■□□□□ 0.49
NELFA-208ENST00000443203 STK31Q9BXU1 1019 aa18.11■□□□□ 0.49
NELFA-208ENST00000443203 RPS6KA4O75676 772 aa18.1■□□□□ 0.49
NELFA-208ENST00000443203 DBF4Q9UBU7 674 aaPredicted RBP18.1■□□□□ 0.49
NELFA-208ENST00000443203 ZBTB1Q9Y2K1 713 aa18.1■□□□□ 0.49
NELFA-208ENST00000443203 IL6STP40189 918 aaPredicted RBP18.09■□□□□ 0.49
NELFA-208ENST00000443203 PARP3Q9Y6F1 533 aa18.09■□□□□ 0.49
NELFA-208ENST00000443203 A0A087WZG4 1122 aa18.08■□□□□ 0.48
NELFA-208ENST00000443203 KIF3CO14782 793 aa18.08■□□□□ 0.48
NELFA-208ENST00000443203 DDX21Q9NR30 783 aaKnown RBP eCLIP18.08■□□□□ 0.48
NELFA-208ENST00000443203 BCS1LQ9Y276 419 aa18.08■□□□□ 0.48
NELFA-208ENST00000443203 ZNF330Q9Y3S2 320 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms