RNA–Protein interactions for RNA: ENST00000442139.5

ERGIC3-208, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-208ENST00000442139 DNAJC10Q8IXB1 793 aa16.13■□□□□ 0.17
ERGIC3-208ENST00000442139 SLC16A10Q8TF71 515 aa16.13■□□□□ 0.17
ERGIC3-208ENST00000442139 CCDC87Q9NVE4 849 aa16.13■□□□□ 0.17
ERGIC3-208ENST00000442139 MIS18AQ9NYP9 233 aa16.13■□□□□ 0.17
ERGIC3-208ENST00000442139 COL24A1Q17RW2 1714 aa16.12■□□□□ 0.17
ERGIC3-208ENST00000442139 KCNQ3O43525 872 aa16.12■□□□□ 0.17
ERGIC3-208ENST00000442139 RPS6KA4O75676 772 aa16.12■□□□□ 0.17
ERGIC3-208ENST00000442139 CRKLP46109 303 aaKnown RBP16.12■□□□□ 0.17
ERGIC3-208ENST00000442139 GOLGA2Q08379 1002 aa16.12■□□□□ 0.17
ERGIC3-208ENST00000442139 ANO8Q9HCE9 1232 aaPredicted RBP16.12■□□□□ 0.17
ERGIC3-208ENST00000442139 MBIPQ9NS73 344 aa16.12■□□□□ 0.17
ERGIC3-208ENST00000442139 A0A087WZG4 1122 aa16.11■□□□□ 0.17
ERGIC3-208ENST00000442139 E9PSI1 815 aa16.11■□□□□ 0.17
ERGIC3-208ENST00000442139 GNPATO15228 680 aa16.11■□□□□ 0.17
ERGIC3-208ENST00000442139 KCNQ4P56696 695 aa16.11■□□□□ 0.17
ERGIC3-208ENST00000442139 ZNF827Q17R98 1081 aa16.11■□□□□ 0.17
ERGIC3-208ENST00000442139 IL6STP40189 918 aaPredicted RBP16.1■□□□□ 0.17
ERGIC3-208ENST00000442139 R3HDM1Q15032 1099 aaKnown RBP16.1■□□□□ 0.17
ERGIC3-208ENST00000442139 SALL2Q9Y467 1007 aaPredicted RBP16.1■□□□□ 0.17
ERGIC3-208ENST00000442139 TRAPPC3LQ5T215 181 aa16.09■□□□□ 0.17
ERGIC3-208ENST00000442139 INTS5Q6P9B9 1019 aaKnown RBP16.09■□□□□ 0.17
ERGIC3-208ENST00000442139 RGL2O15211 777 aa16.08■□□□□ 0.16
ERGIC3-208ENST00000442139 HNRNPUQ00839 825 aaKnown RBP eCLIP16.08■□□□□ 0.16
ERGIC3-208ENST00000442139 BCORQ6W2J9 1755 aa16.08■□□□□ 0.16
ERGIC3-208ENST00000442139 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.07■□□□□ 0.16
ERGIC3-208ENST00000442139 ZBED9Q6R2W3 1325 aa16.07■□□□□ 0.16
ERGIC3-208ENST00000442139 PNPLA7Q6ZV29 1317 aa16.07■□□□□ 0.16
ERGIC3-208ENST00000442139 FANCIQ9NVI1 1328 aa16.07■□□□□ 0.16
ERGIC3-208ENST00000442139 LRP5O75197 1615 aa16.07■□□□□ 0.16
ERGIC3-208ENST00000442139 SCN7AQ01118 1682 aa16.07■□□□□ 0.16
ERGIC3-208ENST00000442139 COL15A1P39059 1388 aa16.06■□□□□ 0.16
ERGIC3-208ENST00000442139 RFC4P35249 363 aa16.06■□□□□ 0.16
ERGIC3-208ENST00000442139 EIF5P55010 431 aaKnown RBP16.06■□□□□ 0.16
ERGIC3-208ENST00000442139 DUSP27Q5VZP5 1158 aa16.06■□□□□ 0.16
ERGIC3-208ENST00000442139 USP16Q9Y5T5 823 aa16.06■□□□□ 0.16
ERGIC3-208ENST00000442139 CCDC30Q5VVM6 783 aa16.05■□□□□ 0.16
ERGIC3-208ENST00000442139 ZNF428Q96B54 188 aa16.05■□□□□ 0.16
ERGIC3-208ENST00000442139 MTFR1LQ9H019 292 aa16.05■□□□□ 0.16
ERGIC3-208ENST00000442139 DBF4Q9UBU7 674 aaPredicted RBP16.05■□□□□ 0.16
ERGIC3-208ENST00000442139 ZBTB1Q9Y2K1 713 aa16.05■□□□□ 0.16
ERGIC3-208ENST00000442139 NUP98P52948 1817 aa16.05■□□□□ 0.16
ERGIC3-208ENST00000442139 PSDA5PKW4 1024 aaPredicted RBP16.04■□□□□ 0.16
ERGIC3-208ENST00000442139 MSH5O43196 834 aa16.04■□□□□ 0.16
ERGIC3-208ENST00000442139 ZPR1O75312 459 aa16.04■□□□□ 0.16
ERGIC3-208ENST00000442139 CT47B1P0C2W7 299 aaPredicted RBP16.04■□□□□ 0.16
ERGIC3-208ENST00000442139 SLFN5Q08AF3 891 aa16.04■□□□□ 0.16
ERGIC3-208ENST00000442139 HDGFL1Q5TGJ6 251 aa16.04■□□□□ 0.16
ERGIC3-208ENST00000442139 COL23A1Q86Y22 540 aaPredicted RBP16.04■□□□□ 0.16
ERGIC3-208ENST00000442139 PHF14O94880 888 aa16.03■□□□□ 0.16
ERGIC3-208ENST00000442139 A1BGP04217 495 aa16.03■□□□□ 0.16
ERGIC3-208ENST00000442139 CANXP27824 592 aaKnown RBP16.03■□□□□ 0.16
ERGIC3-208ENST00000442139 TWISTNBQ3B726 338 aaPredicted RBP16.03■□□□□ 0.16
ERGIC3-208ENST00000442139 TSR2Q969E8 191 aaKnown RBP16.03■□□□□ 0.16
ERGIC3-208ENST00000442139 DDX21Q9NR30 783 aaKnown RBP eCLIP16.03■□□□□ 0.16
ERGIC3-208ENST00000442139 ANKRD36CQ5JPF3 1778 aa16.03■□□□□ 0.16
ERGIC3-208ENST00000442139 EIF2S2P20042 333 aaKnown RBP16.02■□□□□ 0.16
ERGIC3-208ENST00000442139 NLGN1Q8N2Q7 840 aa16.02■□□□□ 0.16
ERGIC3-208ENST00000442139 ARHGEF1Q92888 912 aaKnown RBP16.02■□□□□ 0.16
ERGIC3-208ENST00000442139 STK31Q9BXU1 1019 aa16.02■□□□□ 0.16
ERGIC3-208ENST00000442139 SPON1Q9HCB6 807 aa16.02■□□□□ 0.16
ERGIC3-208ENST00000442139 HYPKQ9NX55 129 aa16.02■□□□□ 0.16
ERGIC3-208ENST00000442139 NARFQ9UHQ1 456 aa16.02■□□□□ 0.16
ERGIC3-208ENST00000442139 ZNF652Q9Y2D9 606 aa16.02■□□□□ 0.16
ERGIC3-208ENST00000442139 USP42Q9H9J4 1324 aaKnown RBP16.01■□□□□ 0.15
ERGIC3-208ENST00000442139 SENP3-EIF4A1A0A087X0R7 540 aa16.01■□□□□ 0.15
ERGIC3-208ENST00000442139 PRAMEF22A3QJZ6 481 aa16.01■□□□□ 0.15
ERGIC3-208ENST00000442139 TRMT2AQ8IZ69 625 aaKnown RBP16.01■□□□□ 0.15
ERGIC3-208ENST00000442139 C8orf58Q8NAV2 365 aa16.01■□□□□ 0.15
ERGIC3-208ENST00000442139 POLD1P28340 1107 aa16■□□□□ 0.15
ERGIC3-208ENST00000442139 EXOSC9Q06265 439 aaKnown RBP16■□□□□ 0.15
ERGIC3-208ENST00000442139 CLEC4GQ6UXB4 293 aa16■□□□□ 0.15
ERGIC3-208ENST00000442139 KIF6Q6ZMV9 814 aa16■□□□□ 0.15
ERGIC3-208ENST00000442139 NBPF26B4DH59 902 aa15.99■□□□□ 0.15
ERGIC3-208ENST00000442139 ERVV-1B6SEH8 477 aa15.99■□□□□ 0.15
ERGIC3-208ENST00000442139 NBPF10Q6P3W6 841 aaKnown RBP15.99■□□□□ 0.15
ERGIC3-208ENST00000442139 DZIP3Q86Y13 1208 aaKnown RBP15.99■□□□□ 0.15
ERGIC3-208ENST00000442139 NBPF15Q8N660 670 aa15.99■□□□□ 0.15
ERGIC3-208ENST00000442139 KRT24Q2M2I5 525 aa15.98■□□□□ 0.15
ERGIC3-208ENST00000442139 ZNF330Q9Y3S2 320 aaPredicted RBP15.98■□□□□ 0.15
ERGIC3-208ENST00000442139 ARFGEF2Q9Y6D5 1785 aa15.98■□□□□ 0.15
ERGIC3-208ENST00000442139 ELL2O00472 640 aaPredicted RBP15.97■□□□□ 0.15
ERGIC3-208ENST00000442139 SPINK5Q9NQ38 1064 aaPredicted RBP15.97■□□□□ 0.15
ERGIC3-208ENST00000442139 CHPF2Q9P2E5 772 aa15.97■□□□□ 0.15
ERGIC3-208ENST00000442139 VAMP4O75379 141 aa15.96■□□□□ 0.15
ERGIC3-208ENST00000442139 DDX58O95786 925 aaKnown RBP15.96■□□□□ 0.15
ERGIC3-208ENST00000442139 GYS1P13807 737 aa15.96■□□□□ 0.15
ERGIC3-208ENST00000442139 MYL6BP14649 208 aa15.96■□□□□ 0.15
ERGIC3-208ENST00000442139 PDIA6Q15084 440 aa15.96■□□□□ 0.15
ERGIC3-208ENST00000442139 HSP90AB3PQ58FF7 597 aa15.96■□□□□ 0.15
ERGIC3-208ENST00000442139 AMIGO3Q86WK7 504 aa15.96■□□□□ 0.15
ERGIC3-208ENST00000442139 TSPYL6Q8N831 410 aa15.96■□□□□ 0.15
ERGIC3-208ENST00000442139 AFDNP55196 1824 aaKnown RBP15.96■□□□□ 0.14
ERGIC3-208ENST00000442139 KIF13BQ9NQT8 1826 aa15.96■□□□□ 0.14
ERGIC3-208ENST00000442139 MAP3K15Q6ZN16 1313 aa15.95■□□□□ 0.14
ERGIC3-208ENST00000442139 ZBTB7AO95365 584 aa15.95■□□□□ 0.14
ERGIC3-208ENST00000442139 USPL1Q5W0Q7 1092 aa15.95■□□□□ 0.14
ERGIC3-208ENST00000442139 ARXQ96QS3 562 aa15.95■□□□□ 0.14
ERGIC3-208ENST00000442139 NRXN2Q9P2S2 1712 aa15.94■□□□□ 0.14
ERGIC3-208ENST00000442139 CAMTA2O94983 1202 aa15.94■□□□□ 0.14
ERGIC3-208ENST00000442139 ALDH1L2Q3SY69 923 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms