RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 C1QTNF9BB2RNN3 333 aa7.13□□□□□ -1.27
HMGB3P9-201ENST00000441799 ATP4AP20648 1035 aa7.13□□□□□ -1.27
HMGB3P9-201ENST00000441799 TLR1Q15399 786 aa7.13□□□□□ -1.27
HMGB3P9-201ENST00000441799 CD163Q86VB7 1156 aa7.13□□□□□ -1.27
HMGB3P9-201ENST00000441799 ZNF295-AS1Q8N0V1 137 aa7.13□□□□□ -1.27
HMGB3P9-201ENST00000441799 PCDHGC4Q9Y5F7 938 aa7.13□□□□□ -1.27
HMGB3P9-201ENST00000441799 LOC105371045A0A1W2PR82 267 aa7.12□□□□□ -1.27
HMGB3P9-201ENST00000441799 NEURL1BA8MQ27 555 aa7.12□□□□□ -1.27
HMGB3P9-201ENST00000441799 NEFLP07196 543 aa7.12□□□□□ -1.27
HMGB3P9-201ENST00000441799 ARAFP10398 606 aa7.12□□□□□ -1.27
HMGB3P9-201ENST00000441799 AMPD1P23109 780 aa7.12□□□□□ -1.27
HMGB3P9-201ENST00000441799 PLA2G4AP47712 749 aa7.12□□□□□ -1.27
HMGB3P9-201ENST00000441799 DGKGP49619 791 aa7.12□□□□□ -1.27
HMGB3P9-201ENST00000441799 RNF135Q8IUD6 432 aa7.12□□□□□ -1.27
HMGB3P9-201ENST00000441799 CDK11AQ9UQ88 783 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P9-201ENST00000441799 GNB5O14775 395 aa7.11□□□□□ -1.27
HMGB3P9-201ENST00000441799 INHAP05111 366 aa7.11□□□□□ -1.27
HMGB3P9-201ENST00000441799 ITGB7P26010 798 aa7.11□□□□□ -1.27
HMGB3P9-201ENST00000441799 OXLD1Q5BKU9 147 aa7.11□□□□□ -1.27
HMGB3P9-201ENST00000441799 Q8N3U1 123 aa7.11□□□□□ -1.27
HMGB3P9-201ENST00000441799 APBB1O00213 710 aa7.1□□□□□ -1.27
HMGB3P9-201ENST00000441799 CHRNA4P43681 627 aa7.1□□□□□ -1.27
HMGB3P9-201ENST00000441799 GDF10P55107 478 aa7.1□□□□□ -1.27
HMGB3P9-201ENST00000441799 EIF4G2P78344 907 aaKnown RBP eCLIP7.1□□□□□ -1.27
HMGB3P9-201ENST00000441799 TNP2Q05952 138 aa7.1□□□□□ -1.27
HMGB3P9-201ENST00000441799 PDE4CQ08493 712 aa7.1□□□□□ -1.27
HMGB3P9-201ENST00000441799 TRIM26Q12899 539 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P9-201ENST00000441799 SLFNL1Q499Z3 407 aa7.1□□□□□ -1.27
HMGB3P9-201ENST00000441799 FIGNL1Q6PIW4 674 aa7.1□□□□□ -1.27
HMGB3P9-201ENST00000441799 TBC1D9Q6ZT07 1266 aa7.1□□□□□ -1.27
HMGB3P9-201ENST00000441799 NLRP8Q86W28 1048 aa7.1□□□□□ -1.27
HMGB3P9-201ENST00000441799 ATXN7O15265 892 aaPredicted RBP7.09□□□□□ -1.27
HMGB3P9-201ENST00000441799 CENPBP07199 599 aaPredicted RBP7.09□□□□□ -1.27
HMGB3P9-201ENST00000441799 MAPTP10636 758 aaKnown RBP7.09□□□□□ -1.27
HMGB3P9-201ENST00000441799 CHSY3Q70JA7 882 aa7.09□□□□□ -1.27
HMGB3P9-201ENST00000441799 C1orf216Q8TAB5 229 aa7.09□□□□□ -1.27
HMGB3P9-201ENST00000441799 USP3Q9Y6I4 520 aa7.09□□□□□ -1.27
HMGB3P9-201ENST00000441799 A0A1W2PNR3 127 aa7.08□□□□□ -1.28
HMGB3P9-201ENST00000441799 SMTNP53814 917 aa7.08□□□□□ -1.28
HMGB3P9-201ENST00000441799 TAF7LQ5H9L4 462 aa7.08□□□□□ -1.28
HMGB3P9-201ENST00000441799 FCHSD1Q86WN1 690 aa7.08□□□□□ -1.28
HMGB3P9-201ENST00000441799 AIDAQ96BJ3 306 aa7.08□□□□□ -1.28
HMGB3P9-201ENST00000441799 PKNOX2Q96KN3 472 aa7.08□□□□□ -1.28
HMGB3P9-201ENST00000441799 NIFKQ9BYG3 293 aaKnown RBP7.08□□□□□ -1.28
HMGB3P9-201ENST00000441799 KRTAP4-8Q9BYQ9 185 aa7.08□□□□□ -1.28
HMGB3P9-201ENST00000441799 IQSEC3Q9UPP2 1182 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P9-201ENST00000441799 DCDC2BA2VCK2 349 aa7.07□□□□□ -1.28
HMGB3P9-201ENST00000441799 TMEM229AB2RXF0 380 aa7.07□□□□□ -1.28
HMGB3P9-201ENST00000441799 CD33P20138 364 aa7.07□□□□□ -1.28
HMGB3P9-201ENST00000441799 BRD2P25440 801 aaKnown RBP7.07□□□□□ -1.28
HMGB3P9-201ENST00000441799 VAC14Q08AM6 782 aa7.07□□□□□ -1.28
HMGB3P9-201ENST00000441799 FAM182BQ5T319 152 aa7.07□□□□□ -1.28
HMGB3P9-201ENST00000441799 SIRT1Q96EB6 747 aa7.07□□□□□ -1.28
HMGB3P9-201ENST00000441799 SLC4A9Q96Q91 983 aa7.07□□□□□ -1.28
HMGB3P9-201ENST00000441799 PIK3R2O00459 728 aa7.06□□□□□ -1.28
HMGB3P9-201ENST00000441799 TRIM11Q96F44 468 aa7.06□□□□□ -1.28
HMGB3P9-201ENST00000441799 ZIC5Q96T25 663 aa7.06□□□□□ -1.28
HMGB3P9-201ENST00000441799 CHMP4AQ9BY43 222 aa7.06□□□□□ -1.28
HMGB3P9-201ENST00000441799 SERTAD1Q9UHV2 236 aa7.06□□□□□ -1.28
HMGB3P9-201ENST00000441799 CDK2AP1O14519 115 aa7.05□□□□□ -1.28
HMGB3P9-201ENST00000441799 ADH6P28332 368 aa7.05□□□□□ -1.28
HMGB3P9-201ENST00000441799 MTFR1Q15390 333 aa7.05□□□□□ -1.28
HMGB3P9-201ENST00000441799 PLPP7Q8NBV4 271 aa7.05□□□□□ -1.28
HMGB3P9-201ENST00000441799 STRN4Q9NRL3 753 aa7.05□□□□□ -1.28
HMGB3P9-201ENST00000441799 KHNYNO15037 678 aaKnown RBP7.04□□□□□ -1.28
HMGB3P9-201ENST00000441799 PCBP4P57723 403 aaKnown RBP7.04□□□□□ -1.28
HMGB3P9-201ENST00000441799 MAP7D1Q3KQU3 841 aa7.04□□□□□ -1.28
HMGB3P9-201ENST00000441799 ARSJQ5FYB0 599 aaPredicted RBP7.04□□□□□ -1.28
HMGB3P9-201ENST00000441799 AVENQ9NQS1 362 aaPredicted RBP7.04□□□□□ -1.28
HMGB3P9-201ENST00000441799 NOP53Q9NZM5 478 aaKnown RBP7.04□□□□□ -1.28
HMGB3P9-201ENST00000441799 PCDHGA11Q9Y5H2 935 aa7.04□□□□□ -1.28
HMGB3P9-201ENST00000441799 A6NJY4 79 aa7.03□□□□□ -1.28
HMGB3P9-201ENST00000441799 FAM157BP0CG42 384 aa7.03□□□□□ -1.28
HMGB3P9-201ENST00000441799 DOC2BQ14184 412 aa7.03□□□□□ -1.28
HMGB3P9-201ENST00000441799 PLVAPQ9BX97 442 aa7.03□□□□□ -1.28
HMGB3P9-201ENST00000441799 GDPD2Q9HCC8 539 aa7.03□□□□□ -1.28
HMGB3P9-201ENST00000441799 ZDHHC3Q9NYG2 299 aa7.03□□□□□ -1.28
HMGB3P9-201ENST00000441799 EFSO43281 561 aa7.02□□□□□ -1.29
HMGB3P9-201ENST00000441799 ZNF468Q5VIY5 522 aaPredicted RBP7.02□□□□□ -1.29
HMGB3P9-201ENST00000441799 MDFIQ99750 246 aa7.02□□□□□ -1.29
HMGB3P9-201ENST00000441799 SEMA6BQ9H3T3 888 aa7.02□□□□□ -1.29
HMGB3P9-201ENST00000441799 PARP3Q9Y6F1 533 aa7.02□□□□□ -1.29
HMGB3P9-201ENST00000441799 PIK3CDO00329 1044 aa7.01□□□□□ -1.29
HMGB3P9-201ENST00000441799 CDK11BP21127 795 aaKnown RBP7.01□□□□□ -1.29
HMGB3P9-201ENST00000441799 TXLNAP40222 546 aa7.01□□□□□ -1.29
HMGB3P9-201ENST00000441799 NBPF1Q3BBV0 1214 aa7.01□□□□□ -1.29
HMGB3P9-201ENST00000441799 SAMD5Q5TGI4 173 aa7.01□□□□□ -1.29
HMGB3P9-201ENST00000441799 PRM3Q9NNZ6 103 aa7.01□□□□□ -1.29
HMGB3P9-201ENST00000441799 HMGB1P09429 215 aaKnown RBP7□□□□□ -1.29
HMGB3P9-201ENST00000441799 TATP17735 454 aaPredicted RBP7□□□□□ -1.29
HMGB3P9-201ENST00000441799 ZDHHC1Q8WTX9 485 aa7□□□□□ -1.29
HMGB3P9-201ENST00000441799 C7orf43Q8WVR3 580 aa7□□□□□ -1.29
HMGB3P9-201ENST00000441799 CABP1Q9NZU7 370 aa7□□□□□ -1.29
HMGB3P9-201ENST00000441799 MARK1Q9P0L2 795 aa7□□□□□ -1.29
HMGB3P9-201ENST00000441799 ABL2P42684 1182 aa6.99□□□□□ -1.29
HMGB3P9-201ENST00000441799 COL9A3Q14050 684 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P9-201ENST00000441799 PRR12Q9ULL5 1215 aa6.99□□□□□ -1.29
HMGB3P9-201ENST00000441799 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P9-201ENST00000441799 GATA4P43694 442 aa6.98□□□□□ -1.29
HMGB3P9-201ENST00000441799 SEMA3FQ13275 785 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms