RNA–Protein interactions for RNA: ENST00000441330.3

CT47A3-201, Transcript of cancer/testis antigen family 47, member A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CT47A3, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT47A3-201ENST00000441330 RTCBQ9Y3I0 505 aaKnown RBP24.11■■□□□ 1.45
CT47A3-201ENST00000441330 GNPATO15228 680 aa24.1■■□□□ 1.45
CT47A3-201ENST00000441330 INTS5Q6P9B9 1019 aaKnown RBP24.1■■□□□ 1.45
CT47A3-201ENST00000441330 SLC16A10Q8TF71 515 aa24.09■■□□□ 1.45
CT47A3-201ENST00000441330 TJP1Q07157 1748 aa24.09■■□□□ 1.45
CT47A3-201ENST00000441330 COL5A3P25940 1745 aaPredicted RBP24.08■■□□□ 1.45
CT47A3-201ENST00000441330 SENP3-EIF4A1A0A087X0R7 540 aa24.08■■□□□ 1.45
CT47A3-201ENST00000441330 GOLGA2Q08379 1002 aa24.08■■□□□ 1.45
CT47A3-201ENST00000441330 USP16Q9Y5T5 823 aa24.08■■□□□ 1.45
CT47A3-201ENST00000441330 ERBB4Q15303 1308 aa24.08■■□□□ 1.44
CT47A3-201ENST00000441330 TRAPPC3LQ5T215 181 aa24.07■■□□□ 1.44
CT47A3-201ENST00000441330 PNPLA7Q6ZV29 1317 aa24.07■■□□□ 1.44
CT47A3-201ENST00000441330 E9PSI1 815 aa24.06■■□□□ 1.44
CT47A3-201ENST00000441330 IL6STP40189 918 aaPredicted RBP24.06■■□□□ 1.44
CT47A3-201ENST00000441330 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.05■■□□□ 1.44
CT47A3-201ENST00000441330 PSDA5PKW4 1024 aaPredicted RBP24.05■■□□□ 1.44
CT47A3-201ENST00000441330 QSER1Q2KHR3 1735 aa24.04■■□□□ 1.44
CT47A3-201ENST00000441330 A0A087WZG4 1122 aa24.04■■□□□ 1.44
CT47A3-201ENST00000441330 HNRNPUQ00839 825 aaKnown RBP eCLIP24.04■■□□□ 1.44
CT47A3-201ENST00000441330 NPM2Q86SE8 214 aaKnown RBP24.04■■□□□ 1.44
CT47A3-201ENST00000441330 EIF5P55010 431 aaKnown RBP24.03■■□□□ 1.44
CT47A3-201ENST00000441330 DUSP27Q5VZP5 1158 aa24.03■■□□□ 1.44
CT47A3-201ENST00000441330 ZBTB1Q9Y2K1 713 aa24.03■■□□□ 1.44
CT47A3-201ENST00000441330 FANCIQ9NVI1 1328 aa24.03■■□□□ 1.44
CT47A3-201ENST00000441330 PRAMEF22A3QJZ6 481 aa24.02■■□□□ 1.44
CT47A3-201ENST00000441330 COL23A1Q86Y22 540 aaPredicted RBP24.02■■□□□ 1.44
CT47A3-201ENST00000441330 A1BGP04217 495 aa24.01■■□□□ 1.43
CT47A3-201ENST00000441330 CANXP27824 592 aaKnown RBP24.01■■□□□ 1.43
CT47A3-201ENST00000441330 TSR2Q969E8 191 aaKnown RBP24.01■■□□□ 1.43
CT47A3-201ENST00000441330 MYH14Q7Z406 1995 aaKnown RBP24■■□□□ 1.43
CT47A3-201ENST00000441330 RFC4P35249 363 aa24■■□□□ 1.43
CT47A3-201ENST00000441330 SLFN5Q08AF3 891 aa24■■□□□ 1.43
CT47A3-201ENST00000441330 ARHGEF1Q92888 912 aaKnown RBP24■■□□□ 1.43
CT47A3-201ENST00000441330 UBR3Q6ZT12 1888 aa24■■□□□ 1.43
CT47A3-201ENST00000441330 PHF14O94880 888 aa23.99■■□□□ 1.43
CT47A3-201ENST00000441330 MTFR1LQ9H019 292 aa23.99■■□□□ 1.43
CT47A3-201ENST00000441330 RGL2O15211 777 aa23.98■■□□□ 1.43
CT47A3-201ENST00000441330 MSH5O43196 834 aa23.98■■□□□ 1.43
CT47A3-201ENST00000441330 HDGFL1Q5TGJ6 251 aa23.98■■□□□ 1.43
CT47A3-201ENST00000441330 C8orf58Q8NAV2 365 aa23.98■■□□□ 1.43
CT47A3-201ENST00000441330 SPINK5Q9NQ38 1064 aaPredicted RBP23.98■■□□□ 1.43
CT47A3-201ENST00000441330 ZBED9Q6R2W3 1325 aa23.98■■□□□ 1.43
CT47A3-201ENST00000441330 LAMB4A4D0S4 1761 aa23.97■■□□□ 1.43
CT47A3-201ENST00000441330 NBPF26B4DH59 902 aa23.97■■□□□ 1.43
CT47A3-201ENST00000441330 EIF2S2P20042 333 aaKnown RBP23.97■■□□□ 1.43
CT47A3-201ENST00000441330 COL15A1P39059 1388 aa23.97■■□□□ 1.43
CT47A3-201ENST00000441330 KRT24Q2M2I5 525 aa23.97■■□□□ 1.43
CT47A3-201ENST00000441330 NBPF10Q6P3W6 841 aaKnown RBP23.97■■□□□ 1.43
CT47A3-201ENST00000441330 AMIGO3Q86WK7 504 aa23.97■■□□□ 1.43
CT47A3-201ENST00000441330 NBPF15Q8N660 670 aa23.97■■□□□ 1.43
CT47A3-201ENST00000441330 ZPR1O75312 459 aa23.96■■□□□ 1.43
CT47A3-201ENST00000441330 TWISTNBQ3B726 338 aaPredicted RBP23.96■■□□□ 1.43
CT47A3-201ENST00000441330 TRMT2AQ8IZ69 625 aaKnown RBP23.96■■□□□ 1.43
CT47A3-201ENST00000441330 NLGN1Q8N2Q7 840 aa23.96■■□□□ 1.43
CT47A3-201ENST00000441330 DDX21Q9NR30 783 aaKnown RBP eCLIP23.96■■□□□ 1.43
CT47A3-201ENST00000441330 DBF4Q9UBU7 674 aaPredicted RBP23.96■■□□□ 1.43
CT47A3-201ENST00000441330 NARFQ9UHQ1 456 aa23.96■■□□□ 1.43
CT47A3-201ENST00000441330 CCDC30Q5VVM6 783 aa23.95■■□□□ 1.42
CT47A3-201ENST00000441330 SPON1Q9HCB6 807 aa23.95■■□□□ 1.42
CT47A3-201ENST00000441330 CASZ1Q86V15 1759 aa23.94■■□□□ 1.42
CT47A3-201ENST00000441330 USP42Q9H9J4 1324 aaKnown RBP23.94■■□□□ 1.42
CT47A3-201ENST00000441330 PDGFDQ9GZP0 370 aaPredicted RBP23.94■■□□□ 1.42
CT47A3-201ENST00000441330 ELL2O00472 640 aaPredicted RBP23.93■■□□□ 1.42
CT47A3-201ENST00000441330 EXOSC9Q06265 439 aaKnown RBP23.93■■□□□ 1.42
CT47A3-201ENST00000441330 PDIA6Q15084 440 aa23.93■■□□□ 1.42
CT47A3-201ENST00000441330 HYPKQ9NX55 129 aa23.93■■□□□ 1.42
CT47A3-201ENST00000441330 TUBGCP6Q96RT7 1819 aa23.92■■□□□ 1.42
CT47A3-201ENST00000441330 CT47B1P0C2W7 299 aaPredicted RBP23.92■■□□□ 1.42
CT47A3-201ENST00000441330 TSPYL6Q8N831 410 aa23.92■■□□□ 1.42
CT47A3-201ENST00000441330 ZNF428Q96B54 188 aa23.92■■□□□ 1.42
CT47A3-201ENST00000441330 VAMP4O75379 141 aa23.91■■□□□ 1.42
CT47A3-201ENST00000441330 DZIP3Q86Y13 1208 aaKnown RBP23.91■■□□□ 1.42
CT47A3-201ENST00000441330 ZNF330Q9Y3S2 320 aaPredicted RBP23.91■■□□□ 1.42
CT47A3-201ENST00000441330 ZBTB7AO95365 584 aa23.9■■□□□ 1.42
CT47A3-201ENST00000441330 CLEC4GQ6UXB4 293 aa23.9■■□□□ 1.42
CT47A3-201ENST00000441330 SMIM5Q71RC9 77 aa23.9■■□□□ 1.42
CT47A3-201ENST00000441330 CDCA7LQ96GN5 454 aa23.9■■□□□ 1.42
CT47A3-201ENST00000441330 STK31Q9BXU1 1019 aa23.9■■□□□ 1.42
CT47A3-201ENST00000441330 ERVV-1B6SEH8 477 aa23.89■■□□□ 1.41
CT47A3-201ENST00000441330 GYS1P13807 737 aa23.89■■□□□ 1.41
CT47A3-201ENST00000441330 MYL6BP14649 208 aa23.89■■□□□ 1.41
CT47A3-201ENST00000441330 POLD1P28340 1107 aa23.89■■□□□ 1.41
CT47A3-201ENST00000441330 LRP10Q7Z4F1 713 aa23.89■■□□□ 1.41
CT47A3-201ENST00000441330 CHPF2Q9P2E5 772 aa23.89■■□□□ 1.41
CT47A3-201ENST00000441330 ZNF652Q9Y2D9 606 aa23.88■■□□□ 1.41
CT47A3-201ENST00000441330 PIP4K2AP48426 406 aaPredicted RBP23.87■■□□□ 1.41
CT47A3-201ENST00000441330 USPL1Q5W0Q7 1092 aa23.87■■□□□ 1.41
CT47A3-201ENST00000441330 KIF6Q6ZMV9 814 aa23.87■■□□□ 1.41
CT47A3-201ENST00000441330 NECTIN2Q92692 538 aa23.87■■□□□ 1.41
CT47A3-201ENST00000441330 TBC1D2BQ9UPU7 963 aa23.87■■□□□ 1.41
CT47A3-201ENST00000441330 CAMTA2O94983 1202 aa23.86■■□□□ 1.41
CT47A3-201ENST00000441330 ARXQ96QS3 562 aa23.86■■□□□ 1.41
CT47A3-201ENST00000441330 SRP68Q9UHB9 627 aaKnown RBP23.86■■□□□ 1.41
CT47A3-201ENST00000441330 ATF5Q9Y2D1 282 aaPredicted RBP23.86■■□□□ 1.41
CT47A3-201ENST00000441330 PROSER3Q2NL68 480 aa23.85■■□□□ 1.41
CT47A3-201ENST00000441330 SGIP1Q9BQI5 828 aa23.85■■□□□ 1.41
CT47A3-201ENST00000441330 MAP3K15Q6ZN16 1313 aa23.84■■□□□ 1.41
CT47A3-201ENST00000441330 PTGER2P43116 358 aa23.84■■□□□ 1.41
CT47A3-201ENST00000441330 COPS6Q7L5N1 327 aa23.83■■□□□ 1.41
CT47A3-201ENST00000441330 BCL2L12Q9HB09 334 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms