RNA–Protein interactions for RNA: ENST00000439732.6

SMARCA2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-213ENST00000439732 MTFR1LQ9H019 292 aa12.4□□□□□ -0.42
SMARCA2-213ENST00000439732 IL16Q14005 1332 aa12.39□□□□□ -0.43
SMARCA2-213ENST00000439732 RFC4P35249 363 aa12.39□□□□□ -0.43
SMARCA2-213ENST00000439732 WDR63Q8IWG1 891 aa12.39□□□□□ -0.43
SMARCA2-213ENST00000439732 CHMP4AQ9BY43 222 aa12.39□□□□□ -0.43
SMARCA2-213ENST00000439732 MYH14Q7Z406 1995 aaKnown RBP12.39□□□□□ -0.43
SMARCA2-213ENST00000439732 CICQ96RK0 1608 aaPredicted RBP12.38□□□□□ -0.43
SMARCA2-213ENST00000439732 A0A087WZG4 1122 aa12.38□□□□□ -0.43
SMARCA2-213ENST00000439732 GIGYF1O75420 1035 aaPredicted RBP12.38□□□□□ -0.43
SMARCA2-213ENST00000439732 PHF14O94880 888 aa12.38□□□□□ -0.43
SMARCA2-213ENST00000439732 ZBTB7AO95365 584 aa12.38□□□□□ -0.43
SMARCA2-213ENST00000439732 ZNF853P0CG23 659 aa12.38□□□□□ -0.43
SMARCA2-213ENST00000439732 ARHGEF1Q92888 912 aaKnown RBP12.38□□□□□ -0.43
SMARCA2-213ENST00000439732 USP16Q9Y5T5 823 aa12.38□□□□□ -0.43
SMARCA2-213ENST00000439732 UBR3Q6ZT12 1888 aa12.38□□□□□ -0.43
SMARCA2-213ENST00000439732 COL5A3P25940 1745 aaPredicted RBP12.37□□□□□ -0.43
SMARCA2-213ENST00000439732 ZPR1O75312 459 aa12.37□□□□□ -0.43
SMARCA2-213ENST00000439732 CANXP27824 592 aaKnown RBP12.37□□□□□ -0.43
SMARCA2-213ENST00000439732 POLD1P28340 1107 aa12.37□□□□□ -0.43
SMARCA2-213ENST00000439732 IL6STP40189 918 aaPredicted RBP12.37□□□□□ -0.43
SMARCA2-213ENST00000439732 PDGFDQ9GZP0 370 aaPredicted RBP12.37□□□□□ -0.43
SMARCA2-213ENST00000439732 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
SMARCA2-213ENST00000439732 SALL2Q9Y467 1007 aaPredicted RBP12.37□□□□□ -0.43
SMARCA2-213ENST00000439732 TJP1Q07157 1748 aa12.37□□□□□ -0.43
SMARCA2-213ENST00000439732 KDM3BQ7LBC6 1761 aa12.36□□□□□ -0.43
SMARCA2-213ENST00000439732 NLGN1Q8N2Q7 840 aa12.36□□□□□ -0.43
SMARCA2-213ENST00000439732 MBIPQ9NS73 344 aa12.36□□□□□ -0.43
SMARCA2-213ENST00000439732 SOS1Q07889 1333 aaPredicted RBP12.36□□□□□ -0.43
SMARCA2-213ENST00000439732 CASZ1Q86V15 1759 aa12.35□□□□□ -0.43
SMARCA2-213ENST00000439732 TUBGCP6Q96RT7 1819 aa12.35□□□□□ -0.43
SMARCA2-213ENST00000439732 A1BGP04217 495 aa12.35□□□□□ -0.43
SMARCA2-213ENST00000439732 HOXB7P09629 217 aa12.35□□□□□ -0.43
SMARCA2-213ENST00000439732 EIF5P55010 431 aaKnown RBP12.35□□□□□ -0.43
SMARCA2-213ENST00000439732 PPP1R1BQ9UD71 204 aaPredicted RBP12.35□□□□□ -0.43
SMARCA2-213ENST00000439732 ZBTB1Q9Y2K1 713 aa12.35□□□□□ -0.43
SMARCA2-213ENST00000439732 PRAMEF22A3QJZ6 481 aa12.34□□□□□ -0.43
SMARCA2-213ENST00000439732 AMIGO3Q86WK7 504 aa12.34□□□□□ -0.43
SMARCA2-213ENST00000439732 ERBB4Q15303 1308 aa12.34□□□□□ -0.43
SMARCA2-213ENST00000439732 SENP3-EIF4A1A0A087X0R7 540 aa12.33□□□□□ -0.44
SMARCA2-213ENST00000439732 SMIM5Q71RC9 77 aa12.33□□□□□ -0.44
SMARCA2-213ENST00000439732 ARXQ96QS3 562 aa12.33□□□□□ -0.44
SMARCA2-213ENST00000439732 MYH16Q9H6N6 1097 aa12.33□□□□□ -0.44
SMARCA2-213ENST00000439732 NARFQ9UHQ1 456 aa12.33□□□□□ -0.44
SMARCA2-213ENST00000439732 ZNF330Q9Y3S2 320 aaPredicted RBP12.33□□□□□ -0.44
SMARCA2-213ENST00000439732 EIF2S2P20042 333 aaKnown RBP12.32□□□□□ -0.44
SMARCA2-213ENST00000439732 PTGER2P43116 358 aa12.32□□□□□ -0.44
SMARCA2-213ENST00000439732 GOLGA2Q08379 1002 aa12.32□□□□□ -0.44
SMARCA2-213ENST00000439732 DUSP27Q5VZP5 1158 aa12.32□□□□□ -0.44
SMARCA2-213ENST00000439732 COL15A1P39059 1388 aa12.31□□□□□ -0.44
SMARCA2-213ENST00000439732 NBPF26B4DH59 902 aa12.31□□□□□ -0.44
SMARCA2-213ENST00000439732 GYS1P13807 737 aa12.31□□□□□ -0.44
SMARCA2-213ENST00000439732 MSL1Q68DK7 614 aa12.31□□□□□ -0.44
SMARCA2-213ENST00000439732 NBPF10Q6P3W6 841 aaKnown RBP12.31□□□□□ -0.44
SMARCA2-213ENST00000439732 NBPF15Q8N660 670 aa12.31□□□□□ -0.44
SMARCA2-213ENST00000439732 SGIP1Q9BQI5 828 aa12.31□□□□□ -0.44
SMARCA2-213ENST00000439732 USP42Q9H9J4 1324 aaKnown RBP12.31□□□□□ -0.44
SMARCA2-213ENST00000439732 LRP5O75197 1615 aa12.3□□□□□ -0.44
SMARCA2-213ENST00000439732 RGL2O15211 777 aa12.3□□□□□ -0.44
SMARCA2-213ENST00000439732 HDGFL1Q5TGJ6 251 aa12.3□□□□□ -0.44
SMARCA2-213ENST00000439732 CLEC4GQ6UXB4 293 aa12.3□□□□□ -0.44
SMARCA2-213ENST00000439732 DZIP3Q86Y13 1208 aaKnown RBP12.3□□□□□ -0.44
SMARCA2-213ENST00000439732 DDX21Q9NR30 783 aaKnown RBP eCLIP12.3□□□□□ -0.44
SMARCA2-213ENST00000439732 SRP68Q9UHB9 627 aaKnown RBP12.3□□□□□ -0.44
SMARCA2-213ENST00000439732 E9PSI1 815 aa12.29□□□□□ -0.44
SMARCA2-213ENST00000439732 MYL6BP14649 208 aa12.29□□□□□ -0.44
SMARCA2-213ENST00000439732 KRT24Q2M2I5 525 aa12.29□□□□□ -0.44
SMARCA2-213ENST00000439732 CCDC30Q5VVM6 783 aa12.29□□□□□ -0.44
SMARCA2-213ENST00000439732 USPL1Q5W0Q7 1092 aa12.29□□□□□ -0.44
SMARCA2-213ENST00000439732 C8orf58Q8NAV2 365 aa12.29□□□□□ -0.44
SMARCA2-213ENST00000439732 TSR2Q969E8 191 aaKnown RBP12.29□□□□□ -0.44
SMARCA2-213ENST00000439732 DBF4Q9UBU7 674 aaPredicted RBP12.29□□□□□ -0.44
SMARCA2-213ENST00000439732 TBC1D2BQ9UPU7 963 aa12.29□□□□□ -0.44
SMARCA2-213ENST00000439732 ZNF652Q9Y2D9 606 aa12.29□□□□□ -0.44
SMARCA2-213ENST00000439732 PARP3Q9Y6F1 533 aa12.29□□□□□ -0.44
SMARCA2-213ENST00000439732 ZNF521Q96K83 1311 aa12.29□□□□□ -0.44
SMARCA2-213ENST00000439732 LAMB4A4D0S4 1761 aa12.28□□□□□ -0.44
SMARCA2-213ENST00000439732 ERVV-1B6SEH8 477 aa12.28□□□□□ -0.44
SMARCA2-213ENST00000439732 ELL2O00472 640 aaPredicted RBP12.28□□□□□ -0.44
SMARCA2-213ENST00000439732 MMP10P09238 476 aa12.28□□□□□ -0.44
SMARCA2-213ENST00000439732 PIP4K2AP48426 406 aaPredicted RBP12.28□□□□□ -0.44
SMARCA2-213ENST00000439732 FKBP8Q14318 412 aa12.28□□□□□ -0.44
SMARCA2-213ENST00000439732 KIF6Q6ZMV9 814 aa12.28□□□□□ -0.44
SMARCA2-213ENST00000439732 HYPKQ9NX55 129 aa12.28□□□□□ -0.44
SMARCA2-213ENST00000439732 CAMTA2O94983 1202 aa12.27□□□□□ -0.45
SMARCA2-213ENST00000439732 TM4SF1P30408 202 aa12.27□□□□□ -0.45
SMARCA2-213ENST00000439732 PDIA6Q15084 440 aa12.27□□□□□ -0.45
SMARCA2-213ENST00000439732 TWISTNBQ3B726 338 aaPredicted RBP12.27□□□□□ -0.45
SMARCA2-213ENST00000439732 NECTIN2Q92692 538 aa12.27□□□□□ -0.45
SMARCA2-213ENST00000439732 COL24A1Q17RW2 1714 aa12.27□□□□□ -0.45
SMARCA2-213ENST00000439732 FANCIQ9NVI1 1328 aa12.27□□□□□ -0.45
SMARCA2-213ENST00000439732 SETDB2Q96T68 719 aa12.26□□□□□ -0.45
SMARCA2-213ENST00000439732 STK31Q9BXU1 1019 aa12.26□□□□□ -0.45
SMARCA2-213ENST00000439732 CD2APQ9Y5K6 639 aa12.26□□□□□ -0.45
SMARCA2-213ENST00000439732 C4AP0C0L4 1744 aa12.25□□□□□ -0.45
SMARCA2-213ENST00000439732 HNRNPUQ00839 825 aaKnown RBP eCLIP12.25□□□□□ -0.45
SMARCA2-213ENST00000439732 EXOSC9Q06265 439 aaKnown RBP12.25□□□□□ -0.45
SMARCA2-213ENST00000439732 SLFN5Q08AF3 891 aa12.25□□□□□ -0.45
SMARCA2-213ENST00000439732 BCL2L12Q9HB09 334 aa12.25□□□□□ -0.45
SMARCA2-213ENST00000439732 SPINK5Q9NQ38 1064 aaPredicted RBP12.25□□□□□ -0.45
SMARCA2-213ENST00000439732 CHPF2Q9P2E5 772 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms