RNA–Protein interactions for RNA: ENST00000439514.1

HLA-W-207, Transcript of major histocompatibility complex, class I, W (pseudogene), humanhuman

BASIC

Gene HLA-W, Length 771 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-W-207ENST00000439514 ZPR1O75312 459 aa17.26■□□□□ 0.35
HLA-W-207ENST00000439514 TMPOP42166 694 aaKnown RBP17.26■□□□□ 0.35
HLA-W-207ENST00000439514 RIPK4P57078 832 aa17.26■□□□□ 0.35
HLA-W-207ENST00000439514 USP42Q9H9J4 1324 aaKnown RBP17.25■□□□□ 0.35
HLA-W-207ENST00000439514 DCTN1Q14203 1278 aa17.25■□□□□ 0.35
HLA-W-207ENST00000439514 KLHL34Q8N239 644 aa17.25■□□□□ 0.35
HLA-W-207ENST00000439514 COL15A1P39059 1388 aa17.25■□□□□ 0.35
HLA-W-207ENST00000439514 GYS1P13807 737 aa17.24■□□□□ 0.35
HLA-W-207ENST00000439514 IL6STP40189 918 aaPredicted RBP17.24■□□□□ 0.35
HLA-W-207ENST00000439514 ADAMTS8Q9UP79 889 aa17.24■□□□□ 0.35
HLA-W-207ENST00000439514 C4AP0C0L4 1744 aa17.24■□□□□ 0.35
HLA-W-207ENST00000439514 MMP10P09238 476 aa17.23■□□□□ 0.35
HLA-W-207ENST00000439514 NARFQ9UHQ1 456 aa17.23■□□□□ 0.35
HLA-W-207ENST00000439514 ZBTB1Q9Y2K1 713 aa17.23■□□□□ 0.35
HLA-W-207ENST00000439514 PARP3Q9Y6F1 533 aa17.23■□□□□ 0.35
HLA-W-207ENST00000439514 CANXP27824 592 aaKnown RBP17.21■□□□□ 0.35
HLA-W-207ENST00000439514 EIF5P55010 431 aaKnown RBP17.21■□□□□ 0.35
HLA-W-207ENST00000439514 CALD1Q05682 793 aaKnown RBP17.21■□□□□ 0.35
HLA-W-207ENST00000439514 SMIM5Q71RC9 77 aa17.21■□□□□ 0.35
HLA-W-207ENST00000439514 KCNQ3O43525 872 aa17.2■□□□□ 0.34
HLA-W-207ENST00000439514 CCDC146Q8IYE0 955 aa17.2■□□□□ 0.34
HLA-W-207ENST00000439514 KDM3BQ7LBC6 1761 aa17.2■□□□□ 0.34
HLA-W-207ENST00000439514 RGL2O15211 777 aa17.19■□□□□ 0.34
HLA-W-207ENST00000439514 TSPYL4Q9UJ04 414 aa17.19■□□□□ 0.34
HLA-W-207ENST00000439514 ERBB4Q15303 1308 aa17.18■□□□□ 0.34
HLA-W-207ENST00000439514 GRIN3BO60391 1043 aa17.17■□□□□ 0.34
HLA-W-207ENST00000439514 EIF4A1P60842 406 aaKnown RBP17.17■□□□□ 0.34
HLA-W-207ENST00000439514 TGFB2P61812 414 aa17.17■□□□□ 0.34
HLA-W-207ENST00000439514 NEUROD2Q15784 382 aa17.17■□□□□ 0.34
HLA-W-207ENST00000439514 GPR162Q16538 588 aa17.17■□□□□ 0.34
HLA-W-207ENST00000439514 USPL1Q5W0Q7 1092 aa17.17■□□□□ 0.34
HLA-W-207ENST00000439514 MRS2Q9HD23 443 aa17.17■□□□□ 0.34
HLA-W-207ENST00000439514 SRP68Q9UHB9 627 aaKnown RBP17.17■□□□□ 0.34
HLA-W-207ENST00000439514 USP16Q9Y5T5 823 aa17.17■□□□□ 0.34
HLA-W-207ENST00000439514 LAMB4A4D0S4 1761 aa17.17■□□□□ 0.34
HLA-W-207ENST00000439514 GIGYF1O75420 1035 aaPredicted RBP17.16■□□□□ 0.34
HLA-W-207ENST00000439514 A1BGP04217 495 aa17.16■□□□□ 0.34
HLA-W-207ENST00000439514 FKBP8Q14318 412 aa17.16■□□□□ 0.34
HLA-W-207ENST00000439514 THUMPD2Q9BTF0 503 aaKnown RBP17.16■□□□□ 0.34
HLA-W-207ENST00000439514 ZNF652Q9Y2D9 606 aa17.16■□□□□ 0.34
HLA-W-207ENST00000439514 C10orf71Q711Q0 1435 aa17.15■□□□□ 0.34
HLA-W-207ENST00000439514 TM4SF1P30408 202 aa17.15■□□□□ 0.34
HLA-W-207ENST00000439514 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
HLA-W-207ENST00000439514 NLGN2Q8NFZ4 835 aa17.15■□□□□ 0.34
HLA-W-207ENST00000439514 MIS18AQ9NYP9 233 aa17.15■□□□□ 0.34
HLA-W-207ENST00000439514 RRP7AQ9Y3A4 280 aaKnown RBP17.15■□□□□ 0.34
HLA-W-207ENST00000439514 ZNF330Q9Y3S2 320 aaPredicted RBP17.15■□□□□ 0.34
HLA-W-207ENST00000439514 CLEC4GQ6UXB4 293 aa17.14■□□□□ 0.33
HLA-W-207ENST00000439514 TRIM35Q9UPQ4 493 aa17.14■□□□□ 0.33
HLA-W-207ENST00000439514 KIF13BQ9NQT8 1826 aa17.13■□□□□ 0.33
HLA-W-207ENST00000439514 CHL1O00533 1208 aa17.13■□□□□ 0.33
HLA-W-207ENST00000439514 APAF1O14727 1248 aa17.13■□□□□ 0.33
HLA-W-207ENST00000439514 DZIP3Q86Y13 1208 aaKnown RBP17.13■□□□□ 0.33
HLA-W-207ENST00000439514 CHMP4AQ9BY43 222 aa17.13■□□□□ 0.33
HLA-W-207ENST00000439514 SCN7AQ01118 1682 aa17.13■□□□□ 0.33
HLA-W-207ENST00000439514 POLRMTO00411 1230 aaKnown RBP17.12■□□□□ 0.33
HLA-W-207ENST00000439514 HOXB7P09629 217 aa17.12■□□□□ 0.33
HLA-W-207ENST00000439514 CFAP44Q96MT7 982 aa17.12■□□□□ 0.33
HLA-W-207ENST00000439514 PDZRN3Q9UPQ7 1066 aa17.12■□□□□ 0.33
HLA-W-207ENST00000439514 GNAI1P63096 354 aa17.11■□□□□ 0.33
HLA-W-207ENST00000439514 NFIXQ14938 502 aa17.11■□□□□ 0.33
HLA-W-207ENST00000439514 PELP1Q8IZL8 1130 aaKnown RBP17.11■□□□□ 0.33
HLA-W-207ENST00000439514 NGEFQ8N5V2 710 aa17.11■□□□□ 0.33
HLA-W-207ENST00000439514 CARMIL3Q8ND23 1372 aa17.11■□□□□ 0.33
HLA-W-207ENST00000439514 PRAMEF22A3QJZ6 481 aa17.1■□□□□ 0.33
HLA-W-207ENST00000439514 CAMTA2O94983 1202 aa17.1■□□□□ 0.33
HLA-W-207ENST00000439514 DDR1Q08345 913 aa17.1■□□□□ 0.33
HLA-W-207ENST00000439514 CCDC27Q2M243 656 aa17.1■□□□□ 0.33
HLA-W-207ENST00000439514 BCL2L12Q9HB09 334 aa17.1■□□□□ 0.33
HLA-W-207ENST00000439514 IFT57Q9NWB7 429 aa17.1■□□□□ 0.33
HLA-W-207ENST00000439514 TBC1D2BQ9UPU7 963 aa17.1■□□□□ 0.33
HLA-W-207ENST00000439514 SERPINB2P05120 415 aa17.09■□□□□ 0.33
HLA-W-207ENST00000439514 SETDB2Q96T68 719 aa17.09■□□□□ 0.33
HLA-W-207ENST00000439514 BCORQ6W2J9 1755 aa17.08■□□□□ 0.33
HLA-W-207ENST00000439514 PXDNLA1KZ92 1463 aa17.08■□□□□ 0.32
HLA-W-207ENST00000439514 NBPF26B4DH59 902 aa17.08■□□□□ 0.32
HLA-W-207ENST00000439514 ERVV-1B6SEH8 477 aa17.08■□□□□ 0.32
HLA-W-207ENST00000439514 YY1P25490 414 aa17.08■□□□□ 0.32
HLA-W-207ENST00000439514 NBPF10Q6P3W6 841 aaKnown RBP17.08■□□□□ 0.32
HLA-W-207ENST00000439514 KIF6Q6ZMV9 814 aa17.08■□□□□ 0.32
HLA-W-207ENST00000439514 NBPF15Q8N660 670 aa17.08■□□□□ 0.32
HLA-W-207ENST00000439514 LAS1LQ9Y4W2 734 aaKnown RBP17.08■□□□□ 0.32
HLA-W-207ENST00000439514 NRXN2Q9P2S2 1712 aa17.07■□□□□ 0.32
HLA-W-207ENST00000439514 CCDC184Q52MB2 194 aa17.07■□□□□ 0.32
HLA-W-207ENST00000439514 CHD4Q14839 1912 aa17.06■□□□□ 0.32
HLA-W-207ENST00000439514 NPHP1O15259 732 aa17.06■□□□□ 0.32
HLA-W-207ENST00000439514 TBC1D9BQ66K14 1250 aa17.06■□□□□ 0.32
HLA-W-207ENST00000439514 PIM2Q9P1W9 311 aa17.06■□□□□ 0.32
HLA-W-207ENST00000439514 ST5P78524 1137 aa17.05■□□□□ 0.32
HLA-W-207ENST00000439514 BICDL1Q6ZP65 573 aa17.05■□□□□ 0.32
HLA-W-207ENST00000439514 IL16Q14005 1332 aa17.04■□□□□ 0.32
HLA-W-207ENST00000439514 MAP3K15Q6ZN16 1313 aa17.04■□□□□ 0.32
HLA-W-207ENST00000439514 ZNF853P0CG23 659 aa17.04■□□□□ 0.32
HLA-W-207ENST00000439514 YBX3P16989 372 aaKnown RBP eCLIP17.04■□□□□ 0.32
HLA-W-207ENST00000439514 PDE6BP35913 854 aa17.04■□□□□ 0.32
HLA-W-207ENST00000439514 PIP4K2AP48426 406 aaPredicted RBP17.04■□□□□ 0.32
HLA-W-207ENST00000439514 CNBD1Q8NA66 436 aa17.04■□□□□ 0.32
HLA-W-207ENST00000439514 A0A0G2JLW4 131 aa17.03■□□□□ 0.32
HLA-W-207ENST00000439514 MYL6BP14649 208 aa17.03■□□□□ 0.32
HLA-W-207ENST00000439514 DPEP1P16444 411 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms