RNA–Protein interactions for RNA: ENST00000439512.5

TOM1-207, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-207ENST00000439512 ADRA2BP18089 450 aa21.73■■□□□ 1.07
TOM1-207ENST00000439512 RFC4P35249 363 aa21.73■■□□□ 1.07
TOM1-207ENST00000439512 TEX13AQ9BXU3 409 aaPredicted RBP21.73■■□□□ 1.07
TOM1-207ENST00000439512 PNISRQ8TF01 805 aaKnown RBP21.71■■□□□ 1.07
TOM1-207ENST00000439512 SYT17Q9BSW7 474 aa21.71■■□□□ 1.07
TOM1-207ENST00000439512 MRS2Q9HD23 443 aa21.71■■□□□ 1.07
TOM1-207ENST00000439512 SOS1Q07889 1333 aaPredicted RBP21.71■■□□□ 1.07
TOM1-207ENST00000439512 LAMB4A4D0S4 1761 aa21.71■■□□□ 1.07
TOM1-207ENST00000439512 LMOD3Q0VAK6 560 aa21.7■■□□□ 1.06
TOM1-207ENST00000439512 KLHL34Q8N239 644 aa21.7■■□□□ 1.06
TOM1-207ENST00000439512 CANXP27824 592 aaKnown RBP21.69■■□□□ 1.06
TOM1-207ENST00000439512 ZBTB1Q9Y2K1 713 aa21.69■■□□□ 1.06
TOM1-207ENST00000439512 KIF13BQ9NQT8 1826 aa21.69■■□□□ 1.06
TOM1-207ENST00000439512 USP16Q9Y5T5 823 aa21.68■■□□□ 1.06
TOM1-207ENST00000439512 KIAA1551Q9HCM1 1747 aa21.67■■□□□ 1.06
TOM1-207ENST00000439512 SCN7AQ01118 1682 aa21.67■■□□□ 1.06
TOM1-207ENST00000439512 USP42Q9H9J4 1324 aaKnown RBP21.67■■□□□ 1.06
TOM1-207ENST00000439512 PRAMEF22A3QJZ6 481 aa21.67■■□□□ 1.06
TOM1-207ENST00000439512 APAF1O14727 1248 aa21.67■■□□□ 1.06
TOM1-207ENST00000439512 SNRPA1P09661 255 aaKnown RBP21.67■■□□□ 1.06
TOM1-207ENST00000439512 GYS1P13807 737 aa21.67■■□□□ 1.06
TOM1-207ENST00000439512 TRIM35Q9UPQ4 493 aa21.67■■□□□ 1.06
TOM1-207ENST00000439512 COL15A1P39059 1388 aa21.66■■□□□ 1.06
TOM1-207ENST00000439512 NLGN1Q8N2Q7 840 aa21.66■■□□□ 1.06
TOM1-207ENST00000439512 SRP68Q9UHB9 627 aaKnown RBP21.66■■□□□ 1.06
TOM1-207ENST00000439512 A1BGP04217 495 aa21.65■■□□□ 1.06
TOM1-207ENST00000439512 ZPR1O75312 459 aa21.64■■□□□ 1.05
TOM1-207ENST00000439512 TSPYL4Q9UJ04 414 aa21.64■■□□□ 1.05
TOM1-207ENST00000439512 BCORQ6W2J9 1755 aa21.64■■□□□ 1.05
TOM1-207ENST00000439512 MMP10P09238 476 aa21.63■■□□□ 1.05
TOM1-207ENST00000439512 EIF4A1P60842 406 aaKnown RBP21.63■■□□□ 1.05
TOM1-207ENST00000439512 ZNF330Q9Y3S2 320 aaPredicted RBP21.63■■□□□ 1.05
TOM1-207ENST00000439512 EIF5P55010 431 aaKnown RBP21.62■■□□□ 1.05
TOM1-207ENST00000439512 NLGN2Q8NFZ4 835 aa21.62■■□□□ 1.05
TOM1-207ENST00000439512 LAS1LQ9Y4W2 734 aaKnown RBP21.62■■□□□ 1.05
TOM1-207ENST00000439512 NRXN2Q9P2S2 1712 aa21.61■■□□□ 1.05
TOM1-207ENST00000439512 FKBP8Q14318 412 aa21.61■■□□□ 1.05
TOM1-207ENST00000439512 USPL1Q5W0Q7 1092 aa21.61■■□□□ 1.05
TOM1-207ENST00000439512 NPM2Q86SE8 214 aaKnown RBP21.61■■□□□ 1.05
TOM1-207ENST00000439512 NARFQ9UHQ1 456 aa21.61■■□□□ 1.05
TOM1-207ENST00000439512 SENP3-EIF4A1A0A087X0R7 540 aa21.6■■□□□ 1.05
TOM1-207ENST00000439512 GIGYF1O75420 1035 aaPredicted RBP21.6■■□□□ 1.05
TOM1-207ENST00000439512 IL6STP40189 918 aaPredicted RBP21.6■■□□□ 1.05
TOM1-207ENST00000439512 PIP4K2AP48426 406 aaPredicted RBP21.6■■□□□ 1.05
TOM1-207ENST00000439512 BCL2L12Q9HB09 334 aa21.6■■□□□ 1.05
TOM1-207ENST00000439512 BABAM1Q9NWV8 329 aa21.6■■□□□ 1.05
TOM1-207ENST00000439512 C10orf71Q711Q0 1435 aa21.6■■□□□ 1.05
TOM1-207ENST00000439512 UTRNP46939 3433 aa21.6■■□□□ 1.05
TOM1-207ENST00000439512 A0A087WZG4 1122 aa21.59■■□□□ 1.05
TOM1-207ENST00000439512 DCAF8L1A6NGE4 600 aa21.59■■□□□ 1.05
TOM1-207ENST00000439512 CHL1O00533 1208 aa21.58■■□□□ 1.05
TOM1-207ENST00000439512 TBC1D2BQ9UPU7 963 aa21.58■■□□□ 1.05
TOM1-207ENST00000439512 CD2APQ9Y5K6 639 aa21.58■■□□□ 1.05
TOM1-207ENST00000439512 AFDNP55196 1824 aaKnown RBP21.57■■□□□ 1.04
TOM1-207ENST00000439512 PARP3Q9Y6F1 533 aa21.57■■□□□ 1.04
TOM1-207ENST00000439512 DDR1Q08345 913 aa21.56■■□□□ 1.04
TOM1-207ENST00000439512 FAM9BQ8IZU0 186 aa21.56■■□□□ 1.04
TOM1-207ENST00000439512 NBPF26B4DH59 902 aa21.55■■□□□ 1.04
TOM1-207ENST00000439512 TM4SF1P30408 202 aa21.55■■□□□ 1.04
TOM1-207ENST00000439512 NBPF10Q6P3W6 841 aaKnown RBP21.55■■□□□ 1.04
TOM1-207ENST00000439512 NBPF15Q8N660 670 aa21.55■■□□□ 1.04
TOM1-207ENST00000439512 PXDNLA1KZ92 1463 aa21.55■■□□□ 1.04
TOM1-207ENST00000439512 GOLGB1Q14789 3259 aaKnown RBP21.55■■□□□ 1.04
TOM1-207ENST00000439512 BRCA1P38398 1863 aaKnown RBP21.54■■□□□ 1.04
TOM1-207ENST00000439512 CFAP44Q96MT7 982 aa21.54■■□□□ 1.04
TOM1-207ENST00000439512 N4BP2Q86UW6 1770 aaPredicted RBP21.53■■□□□ 1.04
TOM1-207ENST00000439512 POLRMTO00411 1230 aaKnown RBP21.52■■□□□ 1.04
TOM1-207ENST00000439512 EIF2S2P20042 333 aaKnown RBP21.52■■□□□ 1.04
TOM1-207ENST00000439512 CALD1Q05682 793 aaKnown RBP21.52■■□□□ 1.04
TOM1-207ENST00000439512 NFIXQ14938 502 aa21.52■■□□□ 1.04
TOM1-207ENST00000439512 DZIP3Q86Y13 1208 aaKnown RBP21.52■■□□□ 1.04
TOM1-207ENST00000439512 NGEFQ8N5V2 710 aa21.52■■□□□ 1.04
TOM1-207ENST00000439512 BICDL1Q6ZP65 573 aa21.51■■□□□ 1.03
TOM1-207ENST00000439512 PELP1Q8IZL8 1130 aaKnown RBP21.51■■□□□ 1.03
TOM1-207ENST00000439512 CAMTA2O94983 1202 aa21.5■■□□□ 1.03
TOM1-207ENST00000439512 GPR162Q16538 588 aa21.5■■□□□ 1.03
TOM1-207ENST00000439512 KRT24Q2M2I5 525 aa21.5■■□□□ 1.03
TOM1-207ENST00000439512 MBIPQ9NS73 344 aa21.5■■□□□ 1.03
TOM1-207ENST00000439512 SALL2Q9Y467 1007 aaPredicted RBP21.5■■□□□ 1.03
TOM1-207ENST00000439512 ZNF853P0CG23 659 aa21.49■■□□□ 1.03
TOM1-207ENST00000439512 MYL6BP14649 208 aa21.49■■□□□ 1.03
TOM1-207ENST00000439512 YBX3P16989 372 aaKnown RBP eCLIP21.49■■□□□ 1.03
TOM1-207ENST00000439512 GNAI1P63096 354 aa21.49■■□□□ 1.03
TOM1-207ENST00000439512 TBC1D9BQ66K14 1250 aa21.48■■□□□ 1.03
TOM1-207ENST00000439512 NECTIN2Q92692 538 aa21.48■■□□□ 1.03
TOM1-207ENST00000439512 IFT57Q9NWB7 429 aa21.48■■□□□ 1.03
TOM1-207ENST00000439512 DLEC1Q9Y238 1755 aa21.48■■□□□ 1.03
TOM1-207ENST00000439512 ANKRD31Q8N7Z5 1873 aa21.47■■□□□ 1.03
TOM1-207ENST00000439512 SERPINB2P05120 415 aa21.47■■□□□ 1.03
TOM1-207ENST00000439512 CCDC27Q2M243 656 aa21.47■■□□□ 1.03
TOM1-207ENST00000439512 WWC1Q8IX03 1113 aa21.47■■□□□ 1.03
TOM1-207ENST00000439512 CHD4Q14839 1912 aa21.47■■□□□ 1.03
TOM1-207ENST00000439512 LRP10Q7Z4F1 713 aa21.46■■□□□ 1.03
TOM1-207ENST00000439512 A0A0G2JLW4 131 aa21.45■■□□□ 1.02
TOM1-207ENST00000439512 TGFB2P61812 414 aa21.45■■□□□ 1.02
TOM1-207ENST00000439512 WWC3Q9ULE0 1092 aa21.45■■□□□ 1.02
TOM1-207ENST00000439512 CARMIL3Q8ND23 1372 aa21.45■■□□□ 1.02
TOM1-207ENST00000439512 NCBP3Q53F19 620 aaKnown RBP21.44■■□□□ 1.02
TOM1-207ENST00000439512 DUSP27Q5VZP5 1158 aa21.44■■□□□ 1.02
TOM1-207ENST00000439512 CLEC4GQ6UXB4 293 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms