RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 BBXQ8WY36 941 aaPredicted RBP11.96□□□□□ -0.49
CDC42SE1-202ENST00000439374 DDX17Q92841 729 aaKnown RBP11.96□□□□□ -0.49
CDC42SE1-202ENST00000439374 SRCIN1Q9C0H9 1055 aa11.96□□□□□ -0.49
CDC42SE1-202ENST00000439374 PHF8Q9UPP1 1060 aa11.96□□□□□ -0.49
CDC42SE1-202ENST00000439374 KIAA1210Q9ULL0 1709 aa11.96□□□□□ -0.49
CDC42SE1-202ENST00000439374 ARHGAP31Q2M1Z3 1444 aa11.96□□□□□ -0.49
CDC42SE1-202ENST00000439374 SETD1BQ9UPS6 1966 aaKnown RBP11.96□□□□□ -0.49
CDC42SE1-202ENST00000439374 TMEM2Q9UHN6 1383 aa11.96□□□□□ -0.5
CDC42SE1-202ENST00000439374 BTBD11A6QL63 1104 aa11.96□□□□□ -0.5
CDC42SE1-202ENST00000439374 CHAF1AQ13111 956 aaPredicted RBP11.96□□□□□ -0.5
CDC42SE1-202ENST00000439374 SLC39A6Q13433 755 aa11.96□□□□□ -0.5
CDC42SE1-202ENST00000439374 LRSAM1Q6UWE0 723 aa11.96□□□□□ -0.5
CDC42SE1-202ENST00000439374 CKAP2LQ8IYA6 745 aa11.96□□□□□ -0.5
CDC42SE1-202ENST00000439374 PA2G4Q9UQ80 394 aaKnown RBP11.96□□□□□ -0.5
CDC42SE1-202ENST00000439374 HOXC9P31274 260 aa11.95□□□□□ -0.5
CDC42SE1-202ENST00000439374 ZDHHC9Q9Y397 364 aa11.95□□□□□ -0.5
CDC42SE1-202ENST00000439374 CDK11BP21127 795 aaKnown RBP11.95□□□□□ -0.5
CDC42SE1-202ENST00000439374 ATP2B3Q16720 1220 aa11.95□□□□□ -0.5
CDC42SE1-202ENST00000439374 UNC5CLQ8IV45 518 aa11.95□□□□□ -0.5
CDC42SE1-202ENST00000439374 ZFP91Q96JP5 570 aaPredicted RBP11.95□□□□□ -0.5
CDC42SE1-202ENST00000439374 ORAI2Q96SN7 254 aa11.95□□□□□ -0.5
CDC42SE1-202ENST00000439374 PRDM4Q9UKN5 801 aa11.95□□□□□ -0.5
CDC42SE1-202ENST00000439374 SHPRHQ149N8 1683 aa11.95□□□□□ -0.5
CDC42SE1-202ENST00000439374 CSPP1Q1MSJ5 1256 aa11.95□□□□□ -0.5
CDC42SE1-202ENST00000439374 USP48Q86UV5 1035 aa11.95□□□□□ -0.5
CDC42SE1-202ENST00000439374 ISY1Q9ULR0 285 aaKnown RBP11.95□□□□□ -0.5
CDC42SE1-202ENST00000439374 NBPF7P0C2Y1 421 aaPredicted RBP11.94□□□□□ -0.5
CDC42SE1-202ENST00000439374 NOLC1Q14978 699 aaKnown RBP eCLIP11.94□□□□□ -0.5
CDC42SE1-202ENST00000439374 PRAMEF22A3QJZ6 481 aa11.94□□□□□ -0.5
CDC42SE1-202ENST00000439374 NBPF6Q5VWK0 638 aa11.94□□□□□ -0.5
CDC42SE1-202ENST00000439374 PDCL2Q8N4E4 241 aa11.94□□□□□ -0.5
CDC42SE1-202ENST00000439374 CABLES1Q8TDN4 633 aa11.94□□□□□ -0.5
CDC42SE1-202ENST00000439374 NBPF4Q96M43 638 aa11.94□□□□□ -0.5
CDC42SE1-202ENST00000439374 PPP6R1Q9UPN7 881 aa11.94□□□□□ -0.5
CDC42SE1-202ENST00000439374 RTL1A6NKG5 1358 aa11.94□□□□□ -0.5
CDC42SE1-202ENST00000439374 PTMSP20962 102 aa11.94□□□□□ -0.5
CDC42SE1-202ENST00000439374 CWF19L2Q2TBE0 894 aaKnown RBP11.94□□□□□ -0.5
CDC42SE1-202ENST00000439374 KIF3AQ9Y496 699 aa11.94□□□□□ -0.5
CDC42SE1-202ENST00000439374 PTPRCP08575 1304 aa11.93□□□□□ -0.5
CDC42SE1-202ENST00000439374 DIAPH3Q9NSV4 1193 aa11.93□□□□□ -0.5
CDC42SE1-202ENST00000439374 ZC3H13Q5T200 1668 aaKnown RBP11.93□□□□□ -0.5
CDC42SE1-202ENST00000439374 MYO5BQ9ULV0 1848 aa11.93□□□□□ -0.5
CDC42SE1-202ENST00000439374 CCDC8Q9H0W5 538 aaPredicted RBP11.93□□□□□ -0.5
CDC42SE1-202ENST00000439374 A0A087WWV3 80 aa11.92□□□□□ -0.5
CDC42SE1-202ENST00000439374 PLEKHG3A1L390 1219 aa11.92□□□□□ -0.5
CDC42SE1-202ENST00000439374 CHMP4AQ9BY43 222 aa11.92□□□□□ -0.5
CDC42SE1-202ENST00000439374 COL3A1P02461 1466 aaPredicted RBP11.92□□□□□ -0.5
CDC42SE1-202ENST00000439374 IFIT2P09913 472 aaKnown RBP11.92□□□□□ -0.5
CDC42SE1-202ENST00000439374 STK3Q13188 491 aa11.92□□□□□ -0.5
CDC42SE1-202ENST00000439374 ARHGEF28Q8N1W1 1705 aaKnown RBP11.92□□□□□ -0.5
CDC42SE1-202ENST00000439374 GOLGA6L4A6NEF3 574 aa11.92□□□□□ -0.5
CDC42SE1-202ENST00000439374 DYNC1I1O14576 645 aa11.92□□□□□ -0.5
CDC42SE1-202ENST00000439374 DDIT3P35638 169 aa11.92□□□□□ -0.5
CDC42SE1-202ENST00000439374 CHRNA2Q15822 529 aa11.92□□□□□ -0.5
CDC42SE1-202ENST00000439374 RIC3Q7Z5B4 369 aa11.92□□□□□ -0.5
CDC42SE1-202ENST00000439374 KLHDC4Q8TBB5 520 aa11.92□□□□□ -0.5
CDC42SE1-202ENST00000439374 MYO3AQ8NEV4 1616 aa11.92□□□□□ -0.5
CDC42SE1-202ENST00000439374 SYAP1Q96A49 352 aaPredicted RBP11.91□□□□□ -0.5
CDC42SE1-202ENST00000439374 ZNF445P59923 1031 aa11.91□□□□□ -0.5
CDC42SE1-202ENST00000439374 FGD1P98174 961 aa11.91□□□□□ -0.5
CDC42SE1-202ENST00000439374 TFIP11Q9UBB9 837 aaKnown RBP11.91□□□□□ -0.5
CDC42SE1-202ENST00000439374 FLT4P35916 1363 aa11.91□□□□□ -0.5
CDC42SE1-202ENST00000439374 LRMPQ12912 555 aa11.91□□□□□ -0.5
CDC42SE1-202ENST00000439374 NCBP3Q53F19 620 aaKnown RBP11.91□□□□□ -0.5
CDC42SE1-202ENST00000439374 PROSER2Q86WR7 435 aaPredicted RBP11.91□□□□□ -0.5
CDC42SE1-202ENST00000439374 PIK3R4Q99570 1358 aa11.9□□□□□ -0.5
CDC42SE1-202ENST00000439374 KDM4AO75164 1064 aa11.9□□□□□ -0.5
CDC42SE1-202ENST00000439374 NECAB1Q8N987 351 aa11.9□□□□□ -0.5
CDC42SE1-202ENST00000439374 USP44Q9H0E7 712 aa11.9□□□□□ -0.5
CDC42SE1-202ENST00000439374 BCL2L12Q9HB09 334 aa11.9□□□□□ -0.5
CDC42SE1-202ENST00000439374 TRMT1Q9NXH9 659 aaKnown RBP11.9□□□□□ -0.5
CDC42SE1-202ENST00000439374 CCDC83Q8IWF9 413 aa11.9□□□□□ -0.5
CDC42SE1-202ENST00000439374 MAP7D2Q96T17 732 aa11.9□□□□□ -0.5
CDC42SE1-202ENST00000439374 PYCARDQ9ULZ3 195 aa11.9□□□□□ -0.5
CDC42SE1-202ENST00000439374 MAP3K2Q9Y2U5 619 aa11.9□□□□□ -0.5
CDC42SE1-202ENST00000439374 RIOK3O14730 519 aaKnown RBP11.9□□□□□ -0.51
CDC42SE1-202ENST00000439374 GORABQ5T7V8 394 aa11.9□□□□□ -0.51
CDC42SE1-202ENST00000439374 DNAAF4Q8WXU2 420 aa11.9□□□□□ -0.51
CDC42SE1-202ENST00000439374 CCDC85AQ96PX6 553 aaPredicted RBP11.9□□□□□ -0.51
CDC42SE1-202ENST00000439374 CCDC94Q9BW85 323 aaPredicted RBP11.9□□□□□ -0.51
CDC42SE1-202ENST00000439374 NDUFB9Q9Y6M9 179 aa11.9□□□□□ -0.51
CDC42SE1-202ENST00000439374 PTGS1P23219 599 aa11.89□□□□□ -0.51
CDC42SE1-202ENST00000439374 ATP8B2P98198 1209 aa11.89□□□□□ -0.51
CDC42SE1-202ENST00000439374 AACSQ86V21 672 aa11.89□□□□□ -0.51
CDC42SE1-202ENST00000439374 ESYT1Q9BSJ8 1104 aa11.89□□□□□ -0.51
CDC42SE1-202ENST00000439374 BOLA2Q9H3K6 86 aa11.89□□□□□ -0.51
CDC42SE1-202ENST00000439374 CPSF1Q10570 1443 aaKnown RBP11.89□□□□□ -0.51
CDC42SE1-202ENST00000439374 CFAP74Q9C0B2 1584 aa11.89□□□□□ -0.51
CDC42SE1-202ENST00000439374 ANKLE2Q86XL3 938 aa11.89□□□□□ -0.51
CDC42SE1-202ENST00000439374 CLASRPQ8N2M8 674 aaKnown RBP11.89□□□□□ -0.51
CDC42SE1-202ENST00000439374 ATP7BP35670 1465 aa11.89□□□□□ -0.51
CDC42SE1-202ENST00000439374 PROSER3Q2NL68 480 aa11.88□□□□□ -0.51
CDC42SE1-202ENST00000439374 PLEKHO1Q53GL0 409 aaPredicted RBP11.88□□□□□ -0.51
CDC42SE1-202ENST00000439374 RHPN1Q8TCX5 695 aa11.88□□□□□ -0.51
CDC42SE1-202ENST00000439374 TRIM5Q9C035 493 aa11.88□□□□□ -0.51
CDC42SE1-202ENST00000439374 AATKQ6ZMQ8 1374 aa11.88□□□□□ -0.51
CDC42SE1-202ENST00000439374 ATP5J2-PTCD1G3V325 749 aa11.88□□□□□ -0.51
CDC42SE1-202ENST00000439374 PTCD1O75127 700 aaKnown RBP11.88□□□□□ -0.51
CDC42SE1-202ENST00000439374 RAPGEF4Q8WZA2 1011 aa11.88□□□□□ -0.51
CDC42SE1-202ENST00000439374 MAP2P11137 1827 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms