RNA–Protein interactions for RNA: ENST00000439272.6

GNB1-204, Transcript of G protein subunit beta 1, humanhuman

TSL 5

Gene GNB1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNB1-204ENST00000439272 LINC00116Q8NCU8 138 aa12.55□□□□□ -0.4
GNB1-204ENST00000439272 AK7Q96M32 723 aa12.55□□□□□ -0.4
GNB1-204ENST00000439272 SLC4A9Q96Q91 983 aa12.55□□□□□ -0.4
GNB1-204ENST00000439272 TFCP2L1Q9NZI6 479 aa12.55□□□□□ -0.4
GNB1-204ENST00000439272 LRP5O75197 1615 aa12.55□□□□□ -0.4
GNB1-204ENST00000439272 CACNA1FO60840 1977 aa12.54□□□□□ -0.4
GNB1-204ENST00000439272 COL24A1Q17RW2 1714 aa12.54□□□□□ -0.4
GNB1-204ENST00000439272 SENP3-EIF4A1A0A087X0R7 540 aa12.53□□□□□ -0.4
GNB1-204ENST00000439272 CCER2I3L3R5 266 aa12.53□□□□□ -0.4
GNB1-204ENST00000439272 ZNF496Q96IT1 587 aaPredicted RBP12.53□□□□□ -0.4
GNB1-204ENST00000439272 MIS18AQ9NYP9 233 aa12.53□□□□□ -0.4
GNB1-204ENST00000439272 TRIM35Q9UPQ4 493 aa12.53□□□□□ -0.4
GNB1-204ENST00000439272 KCNQ3O43525 872 aa12.52□□□□□ -0.41
GNB1-204ENST00000439272 DNAJC10Q8IXB1 793 aa12.52□□□□□ -0.41
GNB1-204ENST00000439272 FMNL2Q96PY5 1086 aa12.52□□□□□ -0.41
GNB1-204ENST00000439272 PDGFDQ9GZP0 370 aaPredicted RBP12.52□□□□□ -0.41
GNB1-204ENST00000439272 PNPLA7Q6ZV29 1317 aa12.52□□□□□ -0.41
GNB1-204ENST00000439272 HEG1Q9ULI3 1381 aa12.52□□□□□ -0.41
GNB1-204ENST00000439272 GNPATO15228 680 aa12.51□□□□□ -0.41
GNB1-204ENST00000439272 VSIG10Q8N0Z9 540 aa12.51□□□□□ -0.41
GNB1-204ENST00000439272 MIER1Q8N108 512 aa12.51□□□□□ -0.41
GNB1-204ENST00000439272 CNTNAP4Q9C0A0 1308 aa12.51□□□□□ -0.41
GNB1-204ENST00000439272 PHF14O94880 888 aa12.5□□□□□ -0.41
GNB1-204ENST00000439272 TSPYL4Q9UJ04 414 aa12.5□□□□□ -0.41
GNB1-204ENST00000439272 LAS1LQ9Y4W2 734 aaKnown RBP12.5□□□□□ -0.41
GNB1-204ENST00000439272 NUP98P52948 1817 aa12.5□□□□□ -0.41
GNB1-204ENST00000439272 ZBTB7AO95365 584 aa12.49□□□□□ -0.41
GNB1-204ENST00000439272 STARD3NLO95772 234 aa12.49□□□□□ -0.41
GNB1-204ENST00000439272 CRKLP46109 303 aaKnown RBP12.49□□□□□ -0.41
GNB1-204ENST00000439272 RC3H1Q5TC82 1133 aaKnown RBP12.49□□□□□ -0.41
GNB1-204ENST00000439272 CHRDL2Q6WN34 429 aa12.49□□□□□ -0.41
GNB1-204ENST00000439272 FLAD1Q8NFF5 587 aa12.49□□□□□ -0.41
GNB1-204ENST00000439272 BCORQ6W2J9 1755 aa12.48□□□□□ -0.41
GNB1-204ENST00000439272 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.48□□□□□ -0.41
GNB1-204ENST00000439272 CYP19A1P11511 503 aaPredicted RBP12.48□□□□□ -0.41
GNB1-204ENST00000439272 SSFA2P28290 1259 aa12.48□□□□□ -0.41
GNB1-204ENST00000439272 CALD1Q05682 793 aaKnown RBP12.48□□□□□ -0.41
GNB1-204ENST00000439272 SMIM5Q71RC9 77 aa12.48□□□□□ -0.41
GNB1-204ENST00000439272 COL23A1Q86Y22 540 aaPredicted RBP12.48□□□□□ -0.41
GNB1-204ENST00000439272 TEX13AQ9BXU3 409 aaPredicted RBP12.48□□□□□ -0.41
GNB1-204ENST00000439272 CCDC87Q9NVE4 849 aa12.48□□□□□ -0.41
GNB1-204ENST00000439272 RTCBQ9Y3I0 505 aaKnown RBP12.48□□□□□ -0.41
GNB1-204ENST00000439272 AFDNP55196 1824 aaKnown RBP12.48□□□□□ -0.41
GNB1-204ENST00000439272 SRCAPQ6ZRS2 3230 aa12.48□□□□□ -0.41
GNB1-204ENST00000439272 SNRPA1P09661 255 aaKnown RBP12.47□□□□□ -0.41
GNB1-204ENST00000439272 INTS5Q6P9B9 1019 aaKnown RBP12.47□□□□□ -0.41
GNB1-204ENST00000439272 AMIGO3Q86WK7 504 aa12.47□□□□□ -0.41
GNB1-204ENST00000439272 MTFR1LQ9H019 292 aa12.47□□□□□ -0.41
GNB1-204ENST00000439272 BABAM1Q9NWV8 329 aa12.47□□□□□ -0.41
GNB1-204ENST00000439272 SALL2Q9Y467 1007 aaPredicted RBP12.47□□□□□ -0.41
GNB1-204ENST00000439272 SCN7AQ01118 1682 aa12.46□□□□□ -0.41
GNB1-204ENST00000439272 PRAMEF22A3QJZ6 481 aa12.46□□□□□ -0.41
GNB1-204ENST00000439272 RPS6KA4O75676 772 aa12.46□□□□□ -0.41
GNB1-204ENST00000439272 EIF4A1P60842 406 aaKnown RBP12.46□□□□□ -0.41
GNB1-204ENST00000439272 CCDC27Q2M243 656 aa12.46□□□□□ -0.41
GNB1-204ENST00000439272 TRAPPC3LQ5T215 181 aa12.46□□□□□ -0.41
GNB1-204ENST00000439272 SLC16A10Q8TF71 515 aa12.46□□□□□ -0.41
GNB1-204ENST00000439272 SPON1Q9HCB6 807 aa12.46□□□□□ -0.41
GNB1-204ENST00000439272 CHL1O00533 1208 aa12.45□□□□□ -0.42
GNB1-204ENST00000439272 CANXP27824 592 aaKnown RBP12.45□□□□□ -0.42
GNB1-204ENST00000439272 WWC1Q8IX03 1113 aa12.45□□□□□ -0.42
GNB1-204ENST00000439272 CFAP44Q96MT7 982 aa12.45□□□□□ -0.42
GNB1-204ENST00000439272 IFT57Q9NWB7 429 aa12.45□□□□□ -0.42
GNB1-204ENST00000439272 ZBTB1Q9Y2K1 713 aa12.45□□□□□ -0.42
GNB1-204ENST00000439272 USP16Q9Y5T5 823 aa12.45□□□□□ -0.42
GNB1-204ENST00000439272 SOS1Q07889 1333 aaPredicted RBP12.44□□□□□ -0.42
GNB1-204ENST00000439272 RFC4P35249 363 aa12.44□□□□□ -0.42
GNB1-204ENST00000439272 GNAI1P63096 354 aa12.44□□□□□ -0.42
GNB1-204ENST00000439272 ARHGEF1Q92888 912 aaKnown RBP12.44□□□□□ -0.42
GNB1-204ENST00000439272 ZNF330Q9Y3S2 320 aaPredicted RBP12.44□□□□□ -0.42
GNB1-204ENST00000439272 COL15A1P39059 1388 aa12.43□□□□□ -0.42
GNB1-204ENST00000439272 ANKRD36CQ5JPF3 1778 aa12.43□□□□□ -0.42
GNB1-204ENST00000439272 GIGYF1O75420 1035 aaPredicted RBP12.43□□□□□ -0.42
GNB1-204ENST00000439272 A1BGP04217 495 aa12.43□□□□□ -0.42
GNB1-204ENST00000439272 MSL1Q68DK7 614 aa12.43□□□□□ -0.42
GNB1-204ENST00000439272 NGEFQ8N5V2 710 aa12.43□□□□□ -0.42
GNB1-204ENST00000439272 MBIPQ9NS73 344 aa12.43□□□□□ -0.42
GNB1-204ENST00000439272 CLEC11AQ9Y240 323 aa12.43□□□□□ -0.42
GNB1-204ENST00000439272 KIF13BQ9NQT8 1826 aa12.42□□□□□ -0.42
GNB1-204ENST00000439272 ZNF853P0CG23 659 aa12.42□□□□□ -0.42
GNB1-204ENST00000439272 PIP4K2AP48426 406 aaPredicted RBP12.42□□□□□ -0.42
GNB1-204ENST00000439272 NPM2Q86SE8 214 aaKnown RBP12.42□□□□□ -0.42
GNB1-204ENST00000439272 PPP1R1BQ9UD71 204 aaPredicted RBP12.42□□□□□ -0.42
GNB1-204ENST00000439272 ZPR1O75312 459 aa12.41□□□□□ -0.42
GNB1-204ENST00000439272 POLD1P28340 1107 aa12.41□□□□□ -0.42
GNB1-204ENST00000439272 IL6STP40189 918 aaPredicted RBP12.41□□□□□ -0.42
GNB1-204ENST00000439272 PTGER2P43116 358 aa12.41□□□□□ -0.42
GNB1-204ENST00000439272 FXR2P51116 673 aaKnown RBP eCLIP12.41□□□□□ -0.42
GNB1-204ENST00000439272 KRT24Q2M2I5 525 aa12.41□□□□□ -0.42
GNB1-204ENST00000439272 SRP68Q9UHB9 627 aaKnown RBP12.41□□□□□ -0.42
GNB1-204ENST00000439272 IL16Q14005 1332 aa12.4□□□□□ -0.42
GNB1-204ENST00000439272 USP42Q9H9J4 1324 aaKnown RBP12.4□□□□□ -0.42
GNB1-204ENST00000439272 A0A087WZG4 1122 aa12.4□□□□□ -0.42
GNB1-204ENST00000439272 EIF2S2P20042 333 aaKnown RBP12.4□□□□□ -0.42
GNB1-204ENST00000439272 EIF5P55010 431 aaKnown RBP12.4□□□□□ -0.42
GNB1-204ENST00000439272 WDR63Q8IWG1 891 aa12.4□□□□□ -0.42
GNB1-204ENST00000439272 TSR2Q969E8 191 aaKnown RBP12.4□□□□□ -0.42
GNB1-204ENST00000439272 ARXQ96QS3 562 aa12.4□□□□□ -0.42
GNB1-204ENST00000439272 N4BP2Q86UW6 1770 aaPredicted RBP12.4□□□□□ -0.42
GNB1-204ENST00000439272 ARFGEF2Q9Y6D5 1785 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms