RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 STARD3NLO95772 234 aa26.47■■□□□ 1.83
CHD3-204ENST00000439235 SLC4A2P04920 1241 aa26.47■■□□□ 1.83
CHD3-204ENST00000439235 SLC4A9Q96Q91 983 aa26.47■■□□□ 1.83
CHD3-204ENST00000439235 CHPF2Q9P2E5 772 aa26.47■■□□□ 1.83
CHD3-204ENST00000439235 TJP1Q07157 1748 aa26.47■■□□□ 1.83
CHD3-204ENST00000439235 IPO8O15397 1037 aaKnown RBP26.46■■□□□ 1.83
CHD3-204ENST00000439235 ATP6V1AP38606 617 aa26.46■■□□□ 1.83
CHD3-204ENST00000439235 FRAT1Q92837 279 aaPredicted RBP26.46■■□□□ 1.83
CHD3-204ENST00000439235 DDX21Q9NR30 783 aaKnown RBP eCLIP26.45■■□□□ 1.82
CHD3-204ENST00000439235 ZKSCAN2Q63HK3 967 aa26.44■■□□□ 1.82
CHD3-204ENST00000439235 LY75O60449 1722 aa26.44■■□□□ 1.82
CHD3-204ENST00000439235 HYPKQ9NX55 129 aa26.43■■□□□ 1.82
CHD3-204ENST00000439235 NOB1Q9ULX3 412 aaKnown RBP26.43■■□□□ 1.82
CHD3-204ENST00000439235 PTPRCP08575 1304 aa26.42■■□□□ 1.82
CHD3-204ENST00000439235 NEFLP07196 543 aa26.42■■□□□ 1.82
CHD3-204ENST00000439235 ARHGAP45Q92619 1136 aa26.42■■□□□ 1.82
CHD3-204ENST00000439235 CCNL1Q9UK58 526 aaPredicted RBP26.42■■□□□ 1.82
CHD3-204ENST00000439235 TNS1Q9HBL0 1735 aaKnown RBP26.42■■□□□ 1.82
CHD3-204ENST00000439235 CYP19A1P11511 503 aaPredicted RBP26.41■■□□□ 1.82
CHD3-204ENST00000439235 PLIN1O60240 522 aa26.4■■□□□ 1.82
CHD3-204ENST00000439235 APBA3O96018 575 aa26.4■■□□□ 1.82
CHD3-204ENST00000439235 MS4A1P11836 297 aa26.4■■□□□ 1.82
CHD3-204ENST00000439235 ITPK1Q13572 414 aa26.4■■□□□ 1.82
CHD3-204ENST00000439235 API5Q9BZZ5 524 aaKnown RBP26.4■■□□□ 1.82
CHD3-204ENST00000439235 HMGB2P26583 209 aaKnown RBP26.39■■□□□ 1.82
CHD3-204ENST00000439235 FLIIQ13045 1269 aa26.39■■□□□ 1.82
CHD3-204ENST00000439235 PDIA6Q15084 440 aa26.39■■□□□ 1.82
CHD3-204ENST00000439235 SLC27A3Q5K4L6 730 aa26.39■■□□□ 1.82
CHD3-204ENST00000439235 ATF7IPQ6VMQ6 1270 aa26.39■■□□□ 1.82
CHD3-204ENST00000439235 PLSCR1O15162 318 aa26.38■■□□□ 1.81
CHD3-204ENST00000439235 MYL6BP14649 208 aa26.38■■□□□ 1.81
CHD3-204ENST00000439235 PROSER3Q2NL68 480 aa26.38■■□□□ 1.81
CHD3-204ENST00000439235 CACNA1FO60840 1977 aa26.38■■□□□ 1.81
CHD3-204ENST00000439235 COL5A3P25940 1745 aaPredicted RBP26.37■■□□□ 1.81
CHD3-204ENST00000439235 ANXA1P04083 346 aa26.37■■□□□ 1.81
CHD3-204ENST00000439235 A1BGP04217 495 aa26.37■■□□□ 1.81
CHD3-204ENST00000439235 G2E3Q7L622 706 aa26.37■■□□□ 1.81
CHD3-204ENST00000439235 RGPD3A6NKT7 1758 aaPredicted RBP26.36■■□□□ 1.81
CHD3-204ENST00000439235 RGPD4Q7Z3J3 1758 aa26.36■■□□□ 1.81
CHD3-204ENST00000439235 TRIM27P14373 513 aa26.36■■□□□ 1.81
CHD3-204ENST00000439235 PDE3AQ14432 1141 aa26.36■■□□□ 1.81
CHD3-204ENST00000439235 CCDC87Q9NVE4 849 aa26.36■■□□□ 1.81
CHD3-204ENST00000439235 CNTNAP4Q9C0A0 1308 aa26.36■■□□□ 1.81
CHD3-204ENST00000439235 NBPF26B4DH59 902 aa26.35■■□□□ 1.81
CHD3-204ENST00000439235 CRKLP46109 303 aaKnown RBP26.35■■□□□ 1.81
CHD3-204ENST00000439235 FKBP5Q13451 457 aaPredicted RBP26.35■■□□□ 1.81
CHD3-204ENST00000439235 NBPF14Q5TI25 921 aa26.35■■□□□ 1.81
CHD3-204ENST00000439235 NBPF10Q6P3W6 841 aaKnown RBP26.35■■□□□ 1.81
CHD3-204ENST00000439235 FTSJ3Q8IY81 847 aaKnown RBP26.35■■□□□ 1.81
CHD3-204ENST00000439235 NBPF15Q8N660 670 aa26.35■■□□□ 1.81
CHD3-204ENST00000439235 PHAXQ9H814 394 aaKnown RBP26.35■■□□□ 1.81
CHD3-204ENST00000439235 RREB1Q92766 1687 aa26.34■■□□□ 1.81
CHD3-204ENST00000439235 SRCAPQ6ZRS2 3230 aa26.34■■□□□ 1.81
CHD3-204ENST00000439235 DDX58O95786 925 aaKnown RBP26.34■■□□□ 1.81
CHD3-204ENST00000439235 SF3B2Q13435 895 aaKnown RBP26.34■■□□□ 1.81
CHD3-204ENST00000439235 LINC00116Q8NCU8 138 aa26.34■■□□□ 1.81
CHD3-204ENST00000439235 PIP4K2AP48426 406 aaPredicted RBP26.33■■□□□ 1.81
CHD3-204ENST00000439235 LRP10Q7Z4F1 713 aa26.33■■□□□ 1.81
CHD3-204ENST00000439235 DZIP1LQ8IYY4 767 aaKnown RBP26.33■■□□□ 1.81
CHD3-204ENST00000439235 ZBTB1Q9Y2K1 713 aa26.33■■□□□ 1.81
CHD3-204ENST00000439235 XAGE3Q8WTP9 111 aa26.32■■□□□ 1.8
CHD3-204ENST00000439235 IL6STP40189 918 aaPredicted RBP26.31■■□□□ 1.8
CHD3-204ENST00000439235 KCNQ4P56696 695 aa26.31■■□□□ 1.8
CHD3-204ENST00000439235 TXNRD1Q16881 649 aa26.31■■□□□ 1.8
CHD3-204ENST00000439235 RC3H1Q5TC82 1133 aaKnown RBP26.31■■□□□ 1.8
CHD3-204ENST00000439235 INTS5Q6P9B9 1019 aaKnown RBP26.31■■□□□ 1.8
CHD3-204ENST00000439235 NPM2Q86SE8 214 aaKnown RBP26.31■■□□□ 1.8
CHD3-204ENST00000439235 ABCC4O15439 1325 aa26.31■■□□□ 1.8
CHD3-204ENST00000439235 COPS6Q7L5N1 327 aa26.3■■□□□ 1.8
CHD3-204ENST00000439235 CLUAP1Q96AJ1 413 aa26.3■■□□□ 1.8
CHD3-204ENST00000439235 AIMP1Q12904 312 aaKnown RBP26.29■■□□□ 1.8
CHD3-204ENST00000439235 C20orf194Q5TEA3 1177 aa26.29■■□□□ 1.8
CHD3-204ENST00000439235 PXDNLA1KZ92 1463 aa26.29■■□□□ 1.8
CHD3-204ENST00000439235 TAF1LQ8IZX4 1826 aa26.28■■□□□ 1.8
CHD3-204ENST00000439235 BAG6P46379 1132 aa26.28■■□□□ 1.8
CHD3-204ENST00000439235 IRX6P78412 446 aaPredicted RBP26.28■■□□□ 1.8
CHD3-204ENST00000439235 CCDC125Q86Z20 511 aa26.28■■□□□ 1.8
CHD3-204ENST00000439235 LRRC4BQ9NT99 713 aa26.28■■□□□ 1.8
CHD3-204ENST00000439235 TNNQ9UQP3 1299 aa26.28■■□□□ 1.8
CHD3-204ENST00000439235 ZNF330Q9Y3S2 320 aaPredicted RBP26.28■■□□□ 1.8
CHD3-204ENST00000439235 C4BP0C0L5 1744 aa26.28■■□□□ 1.8
CHD3-204ENST00000439235 KSR2Q6VAB6 950 aa26.27■■□□□ 1.8
CHD3-204ENST00000439235 PANK1Q8TE04 598 aa26.27■■□□□ 1.8
CHD3-204ENST00000439235 ADCY9O60503 1353 aa26.26■■□□□ 1.79
CHD3-204ENST00000439235 KIF6Q6ZMV9 814 aa26.26■■□□□ 1.79
CHD3-204ENST00000439235 PI4KAP2A4QPH2 592 aa26.25■■□□□ 1.79
CHD3-204ENST00000439235 RLBP1P12271 317 aa26.25■■□□□ 1.79
CHD3-204ENST00000439235 EIF5P55010 431 aaKnown RBP26.25■■□□□ 1.79
CHD3-204ENST00000439235 PI4KAP1Q8N8J0 262 aa26.25■■□□□ 1.79
CHD3-204ENST00000439235 DNAAF4Q8WXU2 420 aa26.25■■□□□ 1.79
CHD3-204ENST00000439235 AK7Q96M32 723 aa26.25■■□□□ 1.79
CHD3-204ENST00000439235 F6X3S4 739 aa26.24■■□□□ 1.79
CHD3-204ENST00000439235 ANKRD13DQ6ZTN6 518 aa26.24■■□□□ 1.79
CHD3-204ENST00000439235 RIC3Q7Z5B4 369 aa26.24■■□□□ 1.79
CHD3-204ENST00000439235 PROM2Q8N271 834 aa26.24■■□□□ 1.79
CHD3-204ENST00000439235 PLBD2Q8NHP8 589 aa26.24■■□□□ 1.79
CHD3-204ENST00000439235 COL15A1P39059 1388 aa26.23■■□□□ 1.79
CHD3-204ENST00000439235 A0A087WZG4 1122 aa26.23■■□□□ 1.79
CHD3-204ENST00000439235 GNPATO15228 680 aa26.23■■□□□ 1.79
CHD3-204ENST00000439235 RPS6KA4O75676 772 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms