RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 SRP68Q9UHB9 627 aaKnown RBP17.54■□□□□ 0.4
LINC00399-201ENST00000439008 SOS1Q07889 1333 aaPredicted RBP17.53■□□□□ 0.4
LINC00399-201ENST00000439008 GOLGB1Q14789 3259 aaKnown RBP17.53■□□□□ 0.4
LINC00399-201ENST00000439008 PNISRQ8TF01 805 aaKnown RBP17.53■□□□□ 0.4
LINC00399-201ENST00000439008 FMNL2Q96PY5 1086 aa17.53■□□□□ 0.4
LINC00399-201ENST00000439008 SYT17Q9BSW7 474 aa17.53■□□□□ 0.4
LINC00399-201ENST00000439008 USP16Q9Y5T5 823 aa17.53■□□□□ 0.4
LINC00399-201ENST00000439008 A1BGP04217 495 aa17.52■□□□□ 0.4
LINC00399-201ENST00000439008 GYS1P13807 737 aa17.52■□□□□ 0.4
LINC00399-201ENST00000439008 SENP3-EIF4A1A0A087X0R7 540 aa17.51■□□□□ 0.39
LINC00399-201ENST00000439008 APAF1O14727 1248 aa17.51■□□□□ 0.39
LINC00399-201ENST00000439008 ADRA2BP18089 450 aa17.51■□□□□ 0.39
LINC00399-201ENST00000439008 CANXP27824 592 aaKnown RBP17.5■□□□□ 0.39
LINC00399-201ENST00000439008 POLD1P28340 1107 aa17.5■□□□□ 0.39
LINC00399-201ENST00000439008 PIP4K2AP48426 406 aaPredicted RBP17.5■□□□□ 0.39
LINC00399-201ENST00000439008 USP42Q9H9J4 1324 aaKnown RBP17.49■□□□□ 0.39
LINC00399-201ENST00000439008 RFC4P35249 363 aa17.49■□□□□ 0.39
LINC00399-201ENST00000439008 EIF5P55010 431 aaKnown RBP17.49■□□□□ 0.39
LINC00399-201ENST00000439008 EIF4A1P60842 406 aaKnown RBP17.49■□□□□ 0.39
LINC00399-201ENST00000439008 NLGN2Q8NFZ4 835 aa17.49■□□□□ 0.39
LINC00399-201ENST00000439008 MRS2Q9HD23 443 aa17.49■□□□□ 0.39
LINC00399-201ENST00000439008 COL15A1P39059 1388 aa17.49■□□□□ 0.39
LINC00399-201ENST00000439008 UTRNP46939 3433 aa17.48■□□□□ 0.39
LINC00399-201ENST00000439008 STARD3NLO95772 234 aa17.48■□□□□ 0.39
LINC00399-201ENST00000439008 FKBP8Q14318 412 aa17.48■□□□□ 0.39
LINC00399-201ENST00000439008 BCL2L12Q9HB09 334 aa17.48■□□□□ 0.39
LINC00399-201ENST00000439008 NBPF26B4DH59 902 aa17.47■□□□□ 0.39
LINC00399-201ENST00000439008 MMP10P09238 476 aa17.47■□□□□ 0.39
LINC00399-201ENST00000439008 SNRPA1P09661 255 aaKnown RBP17.47■□□□□ 0.39
LINC00399-201ENST00000439008 NBPF10Q6P3W6 841 aaKnown RBP17.47■□□□□ 0.39
LINC00399-201ENST00000439008 NBPF15Q8N660 670 aa17.47■□□□□ 0.39
LINC00399-201ENST00000439008 LAMB4A4D0S4 1761 aa17.46■□□□□ 0.39
LINC00399-201ENST00000439008 GIGYF1O75420 1035 aaPredicted RBP17.46■□□□□ 0.39
LINC00399-201ENST00000439008 KLHL34Q8N239 644 aa17.46■□□□□ 0.39
LINC00399-201ENST00000439008 TEX13AQ9BXU3 409 aaPredicted RBP17.46■□□□□ 0.39
LINC00399-201ENST00000439008 DDR1Q08345 913 aa17.45■□□□□ 0.38
LINC00399-201ENST00000439008 USPL1Q5W0Q7 1092 aa17.45■□□□□ 0.38
LINC00399-201ENST00000439008 CHL1O00533 1208 aa17.44■□□□□ 0.38
LINC00399-201ENST00000439008 LMOD3Q0VAK6 560 aa17.44■□□□□ 0.38
LINC00399-201ENST00000439008 KRT24Q2M2I5 525 aa17.44■□□□□ 0.38
LINC00399-201ENST00000439008 NLGN1Q8N2Q7 840 aa17.44■□□□□ 0.38
LINC00399-201ENST00000439008 NARFQ9UHQ1 456 aa17.44■□□□□ 0.38
LINC00399-201ENST00000439008 TSPYL4Q9UJ04 414 aa17.44■□□□□ 0.38
LINC00399-201ENST00000439008 KIAA1551Q9HCM1 1747 aa17.44■□□□□ 0.38
LINC00399-201ENST00000439008 TM4SF1P30408 202 aa17.43■□□□□ 0.38
LINC00399-201ENST00000439008 TBC1D2BQ9UPU7 963 aa17.43■□□□□ 0.38
LINC00399-201ENST00000439008 KIF13BQ9NQT8 1826 aa17.42■□□□□ 0.38
LINC00399-201ENST00000439008 SCN7AQ01118 1682 aa17.42■□□□□ 0.38
LINC00399-201ENST00000439008 IL6STP40189 918 aaPredicted RBP17.42■□□□□ 0.38
LINC00399-201ENST00000439008 AFDNP55196 1824 aaKnown RBP17.42■□□□□ 0.38
LINC00399-201ENST00000439008 ZNF853P0CG23 659 aa17.41■□□□□ 0.38
LINC00399-201ENST00000439008 ZNF330Q9Y3S2 320 aaPredicted RBP17.41■□□□□ 0.38
LINC00399-201ENST00000439008 BCORQ6W2J9 1755 aa17.4■□□□□ 0.38
LINC00399-201ENST00000439008 ZPR1O75312 459 aa17.4■□□□□ 0.38
LINC00399-201ENST00000439008 CAMTA2O94983 1202 aa17.4■□□□□ 0.38
LINC00399-201ENST00000439008 NFIXQ14938 502 aa17.4■□□□□ 0.38
LINC00399-201ENST00000439008 BABAM1Q9NWV8 329 aa17.4■□□□□ 0.38
LINC00399-201ENST00000439008 LAS1LQ9Y4W2 734 aaKnown RBP17.4■□□□□ 0.38
LINC00399-201ENST00000439008 N4BP2Q86UW6 1770 aaPredicted RBP17.39■□□□□ 0.37
LINC00399-201ENST00000439008 POLRMTO00411 1230 aaKnown RBP17.39■□□□□ 0.37
LINC00399-201ENST00000439008 CD2APQ9Y5K6 639 aa17.39■□□□□ 0.37
LINC00399-201ENST00000439008 C10orf71Q711Q0 1435 aa17.38■□□□□ 0.37
LINC00399-201ENST00000439008 NRXN2Q9P2S2 1712 aa17.38■□□□□ 0.37
LINC00399-201ENST00000439008 PDIA6Q15084 440 aa17.38■□□□□ 0.37
LINC00399-201ENST00000439008 LRP10Q7Z4F1 713 aa17.38■□□□□ 0.37
LINC00399-201ENST00000439008 MBIPQ9NS73 344 aa17.38■□□□□ 0.37
LINC00399-201ENST00000439008 TBC1D9BQ66K14 1250 aa17.37■□□□□ 0.37
LINC00399-201ENST00000439008 FAM9BQ8IZU0 186 aa17.37■□□□□ 0.37
LINC00399-201ENST00000439008 CFAP44Q96MT7 982 aa17.37■□□□□ 0.37
LINC00399-201ENST00000439008 A0A087WZG4 1122 aa17.36■□□□□ 0.37
LINC00399-201ENST00000439008 ANXA1P04083 346 aa17.36■□□□□ 0.37
LINC00399-201ENST00000439008 YBX3P16989 372 aaKnown RBP eCLIP17.36■□□□□ 0.37
LINC00399-201ENST00000439008 PROSER3Q2NL68 480 aa17.36■□□□□ 0.37
LINC00399-201ENST00000439008 DZIP3Q86Y13 1208 aaKnown RBP17.36■□□□□ 0.37
LINC00399-201ENST00000439008 PARP3Q9Y6F1 533 aa17.36■□□□□ 0.37
LINC00399-201ENST00000439008 PXDNLA1KZ92 1463 aa17.36■□□□□ 0.37
LINC00399-201ENST00000439008 EIF2S2P20042 333 aaKnown RBP17.35■□□□□ 0.37
LINC00399-201ENST00000439008 BICDL1Q6ZP65 573 aa17.35■□□□□ 0.37
LINC00399-201ENST00000439008 TTLL7Q6ZT98 887 aa17.35■□□□□ 0.37
LINC00399-201ENST00000439008 WWC1Q8IX03 1113 aa17.35■□□□□ 0.37
LINC00399-201ENST00000439008 NECTIN2Q92692 538 aa17.35■□□□□ 0.37
LINC00399-201ENST00000439008 WWC3Q9ULE0 1092 aa17.35■□□□□ 0.37
LINC00399-201ENST00000439008 MYL6BP14649 208 aa17.34■□□□□ 0.37
LINC00399-201ENST00000439008 HLFQ16534 295 aa17.34■□□□□ 0.37
LINC00399-201ENST00000439008 NGEFQ8N5V2 710 aa17.34■□□□□ 0.37
LINC00399-201ENST00000439008 SALL2Q9Y467 1007 aaPredicted RBP17.34■□□□□ 0.37
LINC00399-201ENST00000439008 CARMIL3Q8ND23 1372 aa17.33■□□□□ 0.36
LINC00399-201ENST00000439008 KCNA3P22001 575 aa17.33■□□□□ 0.36
LINC00399-201ENST00000439008 CCDC27Q2M243 656 aa17.33■□□□□ 0.36
LINC00399-201ENST00000439008 IFT57Q9NWB7 429 aa17.33■□□□□ 0.36
LINC00399-201ENST00000439008 BRCA1P38398 1863 aaKnown RBP17.33■□□□□ 0.36
LINC00399-201ENST00000439008 ANKRD31Q8N7Z5 1873 aa17.33■□□□□ 0.36
LINC00399-201ENST00000439008 NUP98P52948 1817 aa17.33■□□□□ 0.36
LINC00399-201ENST00000439008 A0A0G2JLW4 131 aa17.32■□□□□ 0.36
LINC00399-201ENST00000439008 SERPINB2P05120 415 aa17.32■□□□□ 0.36
LINC00399-201ENST00000439008 C8orf58Q8NAV2 365 aa17.32■□□□□ 0.36
LINC00399-201ENST00000439008 DPEP1P16444 411 aa17.31■□□□□ 0.36
LINC00399-201ENST00000439008 DUSP27Q5VZP5 1158 aa17.31■□□□□ 0.36
LINC00399-201ENST00000439008 CCDC24Q8N4L8 307 aa17.31■□□□□ 0.36
LINC00399-201ENST00000439008 TSR2Q969E8 191 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms