RNA–Protein interactions for RNA: ENST00000437437.6

NR1I3-210, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 973 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-210ENST00000437437 LAS1LQ9Y4W2 734 aaKnown RBP16.92■□□□□ 0.3
NR1I3-210ENST00000437437 TSR2Q969E8 191 aaKnown RBP16.91■□□□□ 0.3
NR1I3-210ENST00000437437 ANO8Q9HCE9 1232 aaPredicted RBP16.91■□□□□ 0.3
NR1I3-210ENST00000437437 ERBB4Q15303 1308 aa16.91■□□□□ 0.3
NR1I3-210ENST00000437437 CACNA1FO60840 1977 aa16.9■□□□□ 0.3
NR1I3-210ENST00000437437 STARD3NLO95772 234 aa16.9■□□□□ 0.3
NR1I3-210ENST00000437437 KCNQ4P56696 695 aa16.9■□□□□ 0.3
NR1I3-210ENST00000437437 PRAMEF22A3QJZ6 481 aa16.89■□□□□ 0.29
NR1I3-210ENST00000437437 CRKLP46109 303 aaKnown RBP16.89■□□□□ 0.29
NR1I3-210ENST00000437437 ZNF827Q17R98 1081 aa16.89■□□□□ 0.29
NR1I3-210ENST00000437437 DUSP27Q5VZP5 1158 aa16.89■□□□□ 0.29
NR1I3-210ENST00000437437 C4AP0C0L4 1744 aa16.89■□□□□ 0.29
NR1I3-210ENST00000437437 CASZ1Q86V15 1759 aa16.89■□□□□ 0.29
NR1I3-210ENST00000437437 SLC15A2Q16348 729 aa16.88■□□□□ 0.29
NR1I3-210ENST00000437437 KRT24Q2M2I5 525 aa16.88■□□□□ 0.29
NR1I3-210ENST00000437437 INTS5Q6P9B9 1019 aaKnown RBP16.88■□□□□ 0.29
NR1I3-210ENST00000437437 C8orf58Q8NAV2 365 aa16.88■□□□□ 0.29
NR1I3-210ENST00000437437 CDCA7LQ96GN5 454 aa16.88■□□□□ 0.29
NR1I3-210ENST00000437437 CCDC87Q9NVE4 849 aa16.88■□□□□ 0.29
NR1I3-210ENST00000437437 USP16Q9Y5T5 823 aa16.88■□□□□ 0.29
NR1I3-210ENST00000437437 NBPF14Q5TI25 921 aa16.87■□□□□ 0.29
NR1I3-210ENST00000437437 CHMP4AQ9BY43 222 aa16.87■□□□□ 0.29
NR1I3-210ENST00000437437 CT47B1P0C2W7 299 aaPredicted RBP16.86■□□□□ 0.29
NR1I3-210ENST00000437437 SSFA2P28290 1259 aa16.86■□□□□ 0.29
NR1I3-210ENST00000437437 TSPYL6Q8N831 410 aa16.86■□□□□ 0.29
NR1I3-210ENST00000437437 STK32BQ9NY57 414 aa16.86■□□□□ 0.29
NR1I3-210ENST00000437437 COL24A1Q17RW2 1714 aa16.86■□□□□ 0.29
NR1I3-210ENST00000437437 SCN7AQ01118 1682 aa16.85■□□□□ 0.29
NR1I3-210ENST00000437437 RPS6KA4O75676 772 aa16.85■□□□□ 0.29
NR1I3-210ENST00000437437 EXOSC9Q06265 439 aaKnown RBP16.85■□□□□ 0.29
NR1I3-210ENST00000437437 TWISTNBQ3B726 338 aaPredicted RBP16.85■□□□□ 0.29
NR1I3-210ENST00000437437 AK7Q96M32 723 aa16.85■□□□□ 0.29
NR1I3-210ENST00000437437 ZBTB1Q9Y2K1 713 aa16.85■□□□□ 0.29
NR1I3-210ENST00000437437 BCORQ6W2J9 1755 aa16.84■□□□□ 0.29
NR1I3-210ENST00000437437 IL6STP40189 918 aaPredicted RBP16.84■□□□□ 0.29
NR1I3-210ENST00000437437 EIF5P55010 431 aaKnown RBP16.84■□□□□ 0.29
NR1I3-210ENST00000437437 PPP4R3CPQ6ZMV5 832 aa16.84■□□□□ 0.29
NR1I3-210ENST00000437437 LRP10Q7Z4F1 713 aa16.84■□□□□ 0.29
NR1I3-210ENST00000437437 ZNF428Q96B54 188 aa16.84■□□□□ 0.29
NR1I3-210ENST00000437437 NBPF26B4DH59 902 aa16.83■□□□□ 0.28
NR1I3-210ENST00000437437 GNPATO15228 680 aa16.83■□□□□ 0.28
NR1I3-210ENST00000437437 VAMP4O75379 141 aa16.83■□□□□ 0.28
NR1I3-210ENST00000437437 PDIA6Q15084 440 aa16.83■□□□□ 0.28
NR1I3-210ENST00000437437 HDGFL1Q5TGJ6 251 aa16.83■□□□□ 0.28
NR1I3-210ENST00000437437 NBPF10Q6P3W6 841 aaKnown RBP16.83■□□□□ 0.28
NR1I3-210ENST00000437437 PNPLA7Q6ZV29 1317 aa16.83■□□□□ 0.28
NR1I3-210ENST00000437437 AMIGO3Q86WK7 504 aa16.83■□□□□ 0.28
NR1I3-210ENST00000437437 NBPF15Q8N660 670 aa16.83■□□□□ 0.28
NR1I3-210ENST00000437437 FLAD1Q8NFF5 587 aa16.83■□□□□ 0.28
NR1I3-210ENST00000437437 COL15A1P39059 1388 aa16.82■□□□□ 0.28
NR1I3-210ENST00000437437 A1BGP04217 495 aa16.82■□□□□ 0.28
NR1I3-210ENST00000437437 DDX21Q9NR30 783 aaKnown RBP eCLIP16.82■□□□□ 0.28
NR1I3-210ENST00000437437 RTCBQ9Y3I0 505 aaKnown RBP16.82■□□□□ 0.28
NR1I3-210ENST00000437437 RGL2O15211 777 aa16.81■□□□□ 0.28
NR1I3-210ENST00000437437 TFCP2L1Q9NZI6 479 aa16.81■□□□□ 0.28
NR1I3-210ENST00000437437 DBF4Q9UBU7 674 aaPredicted RBP16.81■□□□□ 0.28
NR1I3-210ENST00000437437 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.8■□□□□ 0.28
NR1I3-210ENST00000437437 CCDC30Q5VVM6 783 aa16.8■□□□□ 0.28
NR1I3-210ENST00000437437 ELL2O00472 640 aaPredicted RBP16.79■□□□□ 0.28
NR1I3-210ENST00000437437 EIF2S2P20042 333 aaKnown RBP16.79■□□□□ 0.28
NR1I3-210ENST00000437437 A0A087WZG4 1122 aa16.78■□□□□ 0.28
NR1I3-210ENST00000437437 PROSER3Q2NL68 480 aa16.78■□□□□ 0.28
NR1I3-210ENST00000437437 COL23A1Q86Y22 540 aaPredicted RBP16.78■□□□□ 0.28
NR1I3-210ENST00000437437 CHPF2Q9P2E5 772 aa16.78■□□□□ 0.28
NR1I3-210ENST00000437437 USP42Q9H9J4 1324 aaKnown RBP16.77■□□□□ 0.28
NR1I3-210ENST00000437437 CANXP27824 592 aaKnown RBP16.77■□□□□ 0.28
NR1I3-210ENST00000437437 R3HDM1Q15032 1099 aaKnown RBP16.77■□□□□ 0.28
NR1I3-210ENST00000437437 TRAPPC3LQ5T215 181 aa16.77■□□□□ 0.28
NR1I3-210ENST00000437437 SLC16A10Q8TF71 515 aa16.77■□□□□ 0.28
NR1I3-210ENST00000437437 ARHGEF1Q92888 912 aaKnown RBP16.77■□□□□ 0.28
NR1I3-210ENST00000437437 HYPKQ9NX55 129 aa16.77■□□□□ 0.28
NR1I3-210ENST00000437437 BRPF1P55201 1214 aaPredicted RBP16.76■□□□□ 0.27
NR1I3-210ENST00000437437 ALDH1L2Q3SY69 923 aa16.76■□□□□ 0.27
NR1I3-210ENST00000437437 NARFQ9UHQ1 456 aa16.76■□□□□ 0.27
NR1I3-210ENST00000437437 ANKRD36CQ5JPF3 1778 aa16.75■□□□□ 0.27
NR1I3-210ENST00000437437 PIP4K2AP48426 406 aaPredicted RBP16.75■□□□□ 0.27
NR1I3-210ENST00000437437 STK31Q9BXU1 1019 aa16.75■□□□□ 0.27
NR1I3-210ENST00000437437 NUP98P52948 1817 aa16.75■□□□□ 0.27
NR1I3-210ENST00000437437 ARFGEF2Q9Y6D5 1785 aa16.74■□□□□ 0.27
NR1I3-210ENST00000437437 PHF14O94880 888 aa16.74■□□□□ 0.27
NR1I3-210ENST00000437437 CAMTA2O94983 1202 aa16.74■□□□□ 0.27
NR1I3-210ENST00000437437 NECTIN2Q92692 538 aa16.74■□□□□ 0.27
NR1I3-210ENST00000437437 ERVV-1B6SEH8 477 aa16.73■□□□□ 0.27
NR1I3-210ENST00000437437 RFC4P35249 363 aa16.73■□□□□ 0.27
NR1I3-210ENST00000437437 DZIP3Q86Y13 1208 aaKnown RBP16.73■□□□□ 0.27
NR1I3-210ENST00000437437 YTHDC1Q96MU7 727 aaKnown RBP16.73■□□□□ 0.27
NR1I3-210ENST00000437437 MAP3K15Q6ZN16 1313 aa16.72■□□□□ 0.27
NR1I3-210ENST00000437437 ATP10DQ9P241 1426 aa16.72■□□□□ 0.27
NR1I3-210ENST00000437437 MSH5O43196 834 aa16.72■□□□□ 0.27
NR1I3-210ENST00000437437 ANXA1P04083 346 aa16.72■□□□□ 0.27
NR1I3-210ENST00000437437 GYS1P13807 737 aa16.72■□□□□ 0.27
NR1I3-210ENST00000437437 MYL6BP14649 208 aa16.72■□□□□ 0.27
NR1I3-210ENST00000437437 RARSP54136 660 aaKnown RBP16.72■□□□□ 0.27
NR1I3-210ENST00000437437 CLEC4GQ6UXB4 293 aa16.72■□□□□ 0.27
NR1I3-210ENST00000437437 SMIM5Q71RC9 77 aa16.72■□□□□ 0.27
NR1I3-210ENST00000437437 NPM2Q86SE8 214 aaKnown RBP16.72■□□□□ 0.27
NR1I3-210ENST00000437437 PDGFDQ9GZP0 370 aaPredicted RBP16.72■□□□□ 0.27
NR1I3-210ENST00000437437 N4BP2Q86UW6 1770 aaPredicted RBP16.72■□□□□ 0.27
NR1I3-210ENST00000437437 NRXN2Q9P2S2 1712 aa16.71■□□□□ 0.27
NR1I3-210ENST00000437437 PSDA5PKW4 1024 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms