RNA–Protein interactions for RNA: ENST00000432657.1

GAPDHP54-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 54, humanhuman

BASIC

Gene GAPDHP54, Length 893 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP54-201ENST00000432657 SLFN5Q08AF3 891 aa13.85□□□□□ -0.19
GAPDHP54-201ENST00000432657 NBPF14Q5TI25 921 aa13.85□□□□□ -0.19
GAPDHP54-201ENST00000432657 INTS5Q6P9B9 1019 aaKnown RBP13.85□□□□□ -0.19
GAPDHP54-201ENST00000432657 AMIGO3Q86WK7 504 aa13.85□□□□□ -0.19
GAPDHP54-201ENST00000432657 CDCA7LQ96GN5 454 aa13.85□□□□□ -0.19
GAPDHP54-201ENST00000432657 STK32BQ9NY57 414 aa13.85□□□□□ -0.19
GAPDHP54-201ENST00000432657 CRKLP46109 303 aaKnown RBP13.84□□□□□ -0.19
GAPDHP54-201ENST00000432657 TRMT2AQ8IZ69 625 aaKnown RBP13.84□□□□□ -0.19
GAPDHP54-201ENST00000432657 C8orf58Q8NAV2 365 aa13.84□□□□□ -0.19
GAPDHP54-201ENST00000432657 STARD3NLO95772 234 aa13.83□□□□□ -0.2
GAPDHP54-201ENST00000432657 DUSP27Q5VZP5 1158 aa13.83□□□□□ -0.2
GAPDHP54-201ENST00000432657 MYH16Q9H6N6 1097 aa13.83□□□□□ -0.2
GAPDHP54-201ENST00000432657 CCDC87Q9NVE4 849 aa13.83□□□□□ -0.2
GAPDHP54-201ENST00000432657 ZBED9Q6R2W3 1325 aa13.83□□□□□ -0.2
GAPDHP54-201ENST00000432657 CASZ1Q86V15 1759 aa13.82□□□□□ -0.2
GAPDHP54-201ENST00000432657 E9PSI1 815 aa13.82□□□□□ -0.2
GAPDHP54-201ENST00000432657 RPS6KA4O75676 772 aa13.82□□□□□ -0.2
GAPDHP54-201ENST00000432657 A1BGP04217 495 aa13.82□□□□□ -0.2
GAPDHP54-201ENST00000432657 HOXB7P09629 217 aa13.82□□□□□ -0.2
GAPDHP54-201ENST00000432657 R3HDM1Q15032 1099 aaKnown RBP13.82□□□□□ -0.2
GAPDHP54-201ENST00000432657 SMIM5Q71RC9 77 aa13.82□□□□□ -0.2
GAPDHP54-201ENST00000432657 TSPYL6Q8N831 410 aa13.82□□□□□ -0.2
GAPDHP54-201ENST00000432657 AK7Q96M32 723 aa13.82□□□□□ -0.2
GAPDHP54-201ENST00000432657 ZBTB1Q9Y2K1 713 aa13.82□□□□□ -0.2
GAPDHP54-201ENST00000432657 PNPLA7Q6ZV29 1317 aa13.82□□□□□ -0.2
GAPDHP54-201ENST00000432657 C4AP0C0L4 1744 aa13.81□□□□□ -0.2
GAPDHP54-201ENST00000432657 NBPF26B4DH59 902 aa13.81□□□□□ -0.2
GAPDHP54-201ENST00000432657 ELL2O00472 640 aaPredicted RBP13.81□□□□□ -0.2
GAPDHP54-201ENST00000432657 GNPATO15228 680 aa13.81□□□□□ -0.2
GAPDHP54-201ENST00000432657 EXOSC9Q06265 439 aaKnown RBP13.81□□□□□ -0.2
GAPDHP54-201ENST00000432657 NBPF10Q6P3W6 841 aaKnown RBP13.81□□□□□ -0.2
GAPDHP54-201ENST00000432657 NBPF15Q8N660 670 aa13.81□□□□□ -0.2
GAPDHP54-201ENST00000432657 PDGFDQ9GZP0 370 aaPredicted RBP13.81□□□□□ -0.2
GAPDHP54-201ENST00000432657 TFCP2L1Q9NZI6 479 aa13.81□□□□□ -0.2
GAPDHP54-201ENST00000432657 LRP5O75197 1615 aa13.81□□□□□ -0.2
GAPDHP54-201ENST00000432657 PSDA5PKW4 1024 aaPredicted RBP13.8□□□□□ -0.2
GAPDHP54-201ENST00000432657 CANXP27824 592 aaKnown RBP13.8□□□□□ -0.2
GAPDHP54-201ENST00000432657 SSFA2P28290 1259 aa13.8□□□□□ -0.2
GAPDHP54-201ENST00000432657 RTCBQ9Y3I0 505 aaKnown RBP13.8□□□□□ -0.2
GAPDHP54-201ENST00000432657 SOS1Q07889 1333 aaPredicted RBP13.8□□□□□ -0.2
GAPDHP54-201ENST00000432657 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.79□□□□□ -0.2
GAPDHP54-201ENST00000432657 EIF2S2P20042 333 aaKnown RBP13.79□□□□□ -0.2
GAPDHP54-201ENST00000432657 IL6STP40189 918 aaPredicted RBP13.79□□□□□ -0.2
GAPDHP54-201ENST00000432657 PIP4K2AP48426 406 aaPredicted RBP13.79□□□□□ -0.2
GAPDHP54-201ENST00000432657 EIF5P55010 431 aaKnown RBP13.79□□□□□ -0.2
GAPDHP54-201ENST00000432657 PDIA6Q15084 440 aa13.79□□□□□ -0.2
GAPDHP54-201ENST00000432657 TWISTNBQ3B726 338 aaPredicted RBP13.79□□□□□ -0.2
GAPDHP54-201ENST00000432657 COL23A1Q86Y22 540 aaPredicted RBP13.79□□□□□ -0.2
GAPDHP54-201ENST00000432657 VAMP4O75379 141 aa13.78□□□□□ -0.2
GAPDHP54-201ENST00000432657 TRAPPC3LQ5T215 181 aa13.78□□□□□ -0.2
GAPDHP54-201ENST00000432657 LRP10Q7Z4F1 713 aa13.78□□□□□ -0.2
GAPDHP54-201ENST00000432657 FLAD1Q8NFF5 587 aa13.78□□□□□ -0.2
GAPDHP54-201ENST00000432657 ARHGEF1Q92888 912 aaKnown RBP13.78□□□□□ -0.2
GAPDHP54-201ENST00000432657 ERBB4Q15303 1308 aa13.78□□□□□ -0.2
GAPDHP54-201ENST00000432657 CACNA1FO60840 1977 aa13.78□□□□□ -0.2
GAPDHP54-201ENST00000432657 PHF14O94880 888 aa13.77□□□□□ -0.21
GAPDHP54-201ENST00000432657 ADRA2BP18089 450 aa13.77□□□□□ -0.21
GAPDHP54-201ENST00000432657 COL24A1Q17RW2 1714 aa13.77□□□□□ -0.21
GAPDHP54-201ENST00000432657 PROSER3Q2NL68 480 aa13.77□□□□□ -0.21
GAPDHP54-201ENST00000432657 HDGFL1Q5TGJ6 251 aa13.77□□□□□ -0.21
GAPDHP54-201ENST00000432657 NECTIN2Q92692 538 aa13.77□□□□□ -0.21
GAPDHP54-201ENST00000432657 COL15A1P39059 1388 aa13.76□□□□□ -0.21
GAPDHP54-201ENST00000432657 ANXA1P04083 346 aa13.76□□□□□ -0.21
GAPDHP54-201ENST00000432657 MYL6BP14649 208 aa13.75□□□□□ -0.21
GAPDHP54-201ENST00000432657 DDX21Q9NR30 783 aaKnown RBP eCLIP13.75□□□□□ -0.21
GAPDHP54-201ENST00000432657 CHPF2Q9P2E5 772 aa13.75□□□□□ -0.21
GAPDHP54-201ENST00000432657 BCORQ6W2J9 1755 aa13.74□□□□□ -0.21
GAPDHP54-201ENST00000432657 CCDC30Q5VVM6 783 aa13.74□□□□□ -0.21
GAPDHP54-201ENST00000432657 YTHDC1Q96MU7 727 aaKnown RBP13.74□□□□□ -0.21
GAPDHP54-201ENST00000432657 DBF4Q9UBU7 674 aaPredicted RBP13.74□□□□□ -0.21
GAPDHP54-201ENST00000432657 SCN7AQ01118 1682 aa13.73□□□□□ -0.21
GAPDHP54-201ENST00000432657 USP42Q9H9J4 1324 aaKnown RBP13.73□□□□□ -0.21
GAPDHP54-201ENST00000432657 RFC4P35249 363 aa13.73□□□□□ -0.21
GAPDHP54-201ENST00000432657 SLC16A10Q8TF71 515 aa13.73□□□□□ -0.21
GAPDHP54-201ENST00000432657 CHMP4AQ9BY43 222 aa13.73□□□□□ -0.21
GAPDHP54-201ENST00000432657 BCL2L12Q9HB09 334 aa13.73□□□□□ -0.21
GAPDHP54-201ENST00000432657 SRP68Q9UHB9 627 aaKnown RBP13.73□□□□□ -0.21
GAPDHP54-201ENST00000432657 NARFQ9UHQ1 456 aa13.73□□□□□ -0.21
GAPDHP54-201ENST00000432657 TBC1D2BQ9UPU7 963 aa13.73□□□□□ -0.21
GAPDHP54-201ENST00000432657 ZNF330Q9Y3S2 320 aaPredicted RBP13.73□□□□□ -0.21
GAPDHP54-201ENST00000432657 NUP98P52948 1817 aa13.73□□□□□ -0.21
GAPDHP54-201ENST00000432657 A0A087WZG4 1122 aa13.72□□□□□ -0.21
GAPDHP54-201ENST00000432657 TCERG1O14776 1098 aaKnown RBP13.72□□□□□ -0.21
GAPDHP54-201ENST00000432657 MSH5O43196 834 aa13.72□□□□□ -0.21
GAPDHP54-201ENST00000432657 GYS1P13807 737 aa13.72□□□□□ -0.21
GAPDHP54-201ENST00000432657 TTLL7Q6ZT98 887 aa13.72□□□□□ -0.21
GAPDHP54-201ENST00000432657 CAMTA2O94983 1202 aa13.71□□□□□ -0.21
GAPDHP54-201ENST00000432657 ZBTB7AO95365 584 aa13.71□□□□□ -0.21
GAPDHP54-201ENST00000432657 USPL1Q5W0Q7 1092 aa13.71□□□□□ -0.21
GAPDHP54-201ENST00000432657 COPS6Q7L5N1 327 aa13.71□□□□□ -0.21
GAPDHP54-201ENST00000432657 DZIP3Q86Y13 1208 aaKnown RBP13.71□□□□□ -0.21
GAPDHP54-201ENST00000432657 HYPKQ9NX55 129 aa13.71□□□□□ -0.21
GAPDHP54-201ENST00000432657 DCAF8L1A6NGE4 600 aa13.7□□□□□ -0.22
GAPDHP54-201ENST00000432657 ZPR1O75312 459 aa13.7□□□□□ -0.22
GAPDHP54-201ENST00000432657 SLC4A2P04920 1241 aa13.7□□□□□ -0.22
GAPDHP54-201ENST00000432657 CT47B1P0C2W7 299 aaPredicted RBP13.7□□□□□ -0.22
GAPDHP54-201ENST00000432657 G2E3Q7L622 706 aa13.7□□□□□ -0.22
GAPDHP54-201ENST00000432657 XAGE3Q8WTP9 111 aa13.7□□□□□ -0.22
GAPDHP54-201ENST00000432657 MTFR1LQ9H019 292 aa13.7□□□□□ -0.22
GAPDHP54-201ENST00000432657 PHAXQ9H814 394 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms