RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 CDK11BP21127 795 aaKnown RBP10.31□□□□□ -0.76
HDAC9-212ENST00000432645 PRDM4Q9UKN5 801 aa10.31□□□□□ -0.76
HDAC9-212ENST00000432645 FAM208AQ9UK61 1670 aaKnown RBP10.31□□□□□ -0.76
HDAC9-212ENST00000432645 UBTFL1P0CB47 393 aaPredicted RBP10.31□□□□□ -0.76
HDAC9-212ENST00000432645 AIMP1Q12904 312 aaKnown RBP10.31□□□□□ -0.76
HDAC9-212ENST00000432645 TEX2Q8IWB9 1127 aa10.31□□□□□ -0.76
HDAC9-212ENST00000432645 SRCIN1Q9C0H9 1055 aa10.31□□□□□ -0.76
HDAC9-212ENST00000432645 STRCQ7RTU9 1775 aa10.31□□□□□ -0.76
HDAC9-212ENST00000432645 CYP27B1O15528 508 aa10.3□□□□□ -0.76
HDAC9-212ENST00000432645 HOXB7P09629 217 aa10.3□□□□□ -0.76
HDAC9-212ENST00000432645 HSP90AA2PQ14568 343 aaPredicted RBP10.3□□□□□ -0.76
HDAC9-212ENST00000432645 TBC1D9Q6ZT07 1266 aa10.3□□□□□ -0.76
HDAC9-212ENST00000432645 TOM1L2Q6ZVM7 507 aa10.3□□□□□ -0.76
HDAC9-212ENST00000432645 DBF4Q9UBU7 674 aaPredicted RBP10.3□□□□□ -0.76
HDAC9-212ENST00000432645 LMO7Q8WWI1 1683 aa10.3□□□□□ -0.76
HDAC9-212ENST00000432645 NBPF7P0C2Y1 421 aaPredicted RBP10.3□□□□□ -0.76
HDAC9-212ENST00000432645 ZNF790Q6PG37 636 aa10.3□□□□□ -0.76
HDAC9-212ENST00000432645 IFNL2Q8IZJ0 200 aa10.3□□□□□ -0.76
HDAC9-212ENST00000432645 SPRYD3Q8NCJ5 442 aa10.3□□□□□ -0.76
HDAC9-212ENST00000432645 DNAAF4Q8WXU2 420 aa10.3□□□□□ -0.76
HDAC9-212ENST00000432645 SLC52A2Q9HAB3 445 aa10.3□□□□□ -0.76
HDAC9-212ENST00000432645 TSHZ3Q63HK5 1081 aa10.3□□□□□ -0.76
HDAC9-212ENST00000432645 SLKQ9H2G2 1235 aaPredicted RBP10.3□□□□□ -0.76
HDAC9-212ENST00000432645 STRN4Q9NRL3 753 aa10.3□□□□□ -0.76
HDAC9-212ENST00000432645 XIRP1Q702N8 1843 aaKnown RBP10.29□□□□□ -0.76
HDAC9-212ENST00000432645 PIP4K2AP48426 406 aaPredicted RBP10.29□□□□□ -0.76
HDAC9-212ENST00000432645 BECN1Q14457 450 aa10.29□□□□□ -0.76
HDAC9-212ENST00000432645 USP35Q9P2H5 1018 aa10.29□□□□□ -0.76
HDAC9-212ENST00000432645 KDM6AO15550 1401 aaPredicted RBP10.29□□□□□ -0.76
HDAC9-212ENST00000432645 MYL6BP14649 208 aa10.29□□□□□ -0.76
HDAC9-212ENST00000432645 NFKBIBQ15653 356 aa10.29□□□□□ -0.76
HDAC9-212ENST00000432645 MAP3K2Q9Y2U5 619 aa10.29□□□□□ -0.76
HDAC9-212ENST00000432645 ATP8B2P98198 1209 aa10.28□□□□□ -0.76
HDAC9-212ENST00000432645 TPRNQ4KMQ1 711 aa10.28□□□□□ -0.76
HDAC9-212ENST00000432645 BEND3Q5T5X7 828 aa10.28□□□□□ -0.76
HDAC9-212ENST00000432645 TTC22Q5TAA0 569 aa10.28□□□□□ -0.76
HDAC9-212ENST00000432645 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.28□□□□□ -0.76
HDAC9-212ENST00000432645 TBC1D2Q9BYX2 928 aa10.28□□□□□ -0.76
HDAC9-212ENST00000432645 SOS2Q07890 1332 aaPredicted RBP10.28□□□□□ -0.76
HDAC9-212ENST00000432645 ZNF496Q96IT1 587 aaPredicted RBP10.28□□□□□ -0.76
HDAC9-212ENST00000432645 ADCY9O60503 1353 aa10.28□□□□□ -0.76
HDAC9-212ENST00000432645 KDM3BQ7LBC6 1761 aa10.28□□□□□ -0.76
HDAC9-212ENST00000432645 CWF19L2Q2TBE0 894 aaKnown RBP10.27□□□□□ -0.76
HDAC9-212ENST00000432645 CAMTA1Q9Y6Y1 1673 aa10.27□□□□□ -0.77
HDAC9-212ENST00000432645 CPDO75976 1380 aa10.27□□□□□ -0.77
HDAC9-212ENST00000432645 CDC45O75419 566 aa10.27□□□□□ -0.77
HDAC9-212ENST00000432645 PPP1R42Q7Z4L9 355 aa10.27□□□□□ -0.77
HDAC9-212ENST00000432645 TTC5Q8N0Z6 440 aa10.27□□□□□ -0.77
HDAC9-212ENST00000432645 DCAF5Q96JK2 942 aa10.27□□□□□ -0.77
HDAC9-212ENST00000432645 LRRCC1Q9C099 1032 aa10.27□□□□□ -0.77
HDAC9-212ENST00000432645 IL1RAPL2Q9NP60 686 aa10.27□□□□□ -0.77
HDAC9-212ENST00000432645 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.27□□□□□ -0.77
HDAC9-212ENST00000432645 COL18A1P39060 1754 aa10.26□□□□□ -0.77
HDAC9-212ENST00000432645 SRGAP3O43295 1099 aa10.26□□□□□ -0.77
HDAC9-212ENST00000432645 SDSP20132 328 aa10.26□□□□□ -0.77
HDAC9-212ENST00000432645 CABP4P57796 275 aa10.26□□□□□ -0.77
HDAC9-212ENST00000432645 EVA1CP58658 441 aa10.26□□□□□ -0.77
HDAC9-212ENST00000432645 PPP4R3CPQ6ZMV5 832 aa10.26□□□□□ -0.77
HDAC9-212ENST00000432645 DDX54Q8TDD1 881 aaKnown RBP10.26□□□□□ -0.77
HDAC9-212ENST00000432645 HEG1Q9ULI3 1381 aa10.26□□□□□ -0.77
HDAC9-212ENST00000432645 C9orf78Q9NZ63 289 aaPredicted RBP10.26□□□□□ -0.77
HDAC9-212ENST00000432645 USP16Q9Y5T5 823 aa10.26□□□□□ -0.77
HDAC9-212ENST00000432645 WDR17Q8IZU2 1322 aa10.26□□□□□ -0.77
HDAC9-212ENST00000432645 OVOS2A0A0G2JMS6 1433 aa10.25□□□□□ -0.77
HDAC9-212ENST00000432645 SURF6O75683 361 aaKnown RBP10.25□□□□□ -0.77
HDAC9-212ENST00000432645 PDIA6Q15084 440 aa10.25□□□□□ -0.77
HDAC9-212ENST00000432645 LARP1Q6PKG0 1096 aaKnown RBP10.25□□□□□ -0.77
HDAC9-212ENST00000432645 KSR2Q6VAB6 950 aa10.25□□□□□ -0.77
HDAC9-212ENST00000432645 FAM43AQ8N2R8 423 aa10.25□□□□□ -0.77
HDAC9-212ENST00000432645 PDE1AP54750 535 aa10.25□□□□□ -0.77
HDAC9-212ENST00000432645 DDX21Q9NR30 783 aaKnown RBP eCLIP10.25□□□□□ -0.77
HDAC9-212ENST00000432645 HYPKQ9NX55 129 aa10.25□□□□□ -0.77
HDAC9-212ENST00000432645 FRAT2O75474 233 aaPredicted RBP10.25□□□□□ -0.77
HDAC9-212ENST00000432645 ZCRB1Q8TBF4 217 aaKnown RBP10.25□□□□□ -0.77
HDAC9-212ENST00000432645 PXDNLA1KZ92 1463 aa10.24□□□□□ -0.77
HDAC9-212ENST00000432645 RIC3Q7Z5B4 369 aa10.24□□□□□ -0.77
HDAC9-212ENST00000432645 RBM25P49756 843 aaKnown RBP10.24□□□□□ -0.77
HDAC9-212ENST00000432645 COPS6Q7L5N1 327 aa10.24□□□□□ -0.77
HDAC9-212ENST00000432645 SSH3Q8TE77 659 aa10.24□□□□□ -0.77
HDAC9-212ENST00000432645 SECISBP2LQ93073 1101 aaKnown RBP10.24□□□□□ -0.77
HDAC9-212ENST00000432645 IBTKQ9P2D0 1353 aaPredicted RBP10.23□□□□□ -0.77
HDAC9-212ENST00000432645 NUTM1Q86Y26 1132 aa10.23□□□□□ -0.77
HDAC9-212ENST00000432645 XAGE3Q8WTP9 111 aa10.23□□□□□ -0.77
HDAC9-212ENST00000432645 RBM42Q9BTD8 480 aaKnown RBP10.23□□□□□ -0.77
HDAC9-212ENST00000432645 DDX58O95786 925 aaKnown RBP10.23□□□□□ -0.77
HDAC9-212ENST00000432645 MX1P20591 662 aa10.23□□□□□ -0.77
HDAC9-212ENST00000432645 GSE1Q14687 1217 aa10.23□□□□□ -0.77
HDAC9-212ENST00000432645 CACNA1FO60840 1977 aa10.23□□□□□ -0.77
HDAC9-212ENST00000432645 HSP90AB1P08238 724 aaKnown RBP10.22□□□□□ -0.77
HDAC9-212ENST00000432645 SNRPA1P09661 255 aaKnown RBP10.22□□□□□ -0.77
HDAC9-212ENST00000432645 FMNL2Q96PY5 1086 aa10.22□□□□□ -0.77
HDAC9-212ENST00000432645 CRYBG1Q9Y4K1 1723 aa10.22□□□□□ -0.77
HDAC9-212ENST00000432645 COL5A2P05997 1499 aaPredicted RBP10.22□□□□□ -0.77
HDAC9-212ENST00000432645 TRIM6-TRIM34B2RNG4 842 aa10.22□□□□□ -0.77
HDAC9-212ENST00000432645 PTCD1O75127 700 aaKnown RBP10.22□□□□□ -0.77
HDAC9-212ENST00000432645 IL2RBP14784 551 aa10.22□□□□□ -0.77
HDAC9-212ENST00000432645 JARID2Q92833 1246 aaPredicted RBP10.22□□□□□ -0.77
HDAC9-212ENST00000432645 RILPL2Q969X0 211 aa10.22□□□□□ -0.77
HDAC9-212ENST00000432645 OS9Q13438 667 aaPredicted RBP10.22□□□□□ -0.77
HDAC9-212ENST00000432645 KIF2CQ99661 725 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms