RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 CCER2I3L3R5 266 aa15.71■□□□□ 0.11
TRERNA1-201ENST00000431460 CANXP27824 592 aaKnown RBP15.71■□□□□ 0.11
TRERNA1-201ENST00000431460 PNISRQ8TF01 805 aaKnown RBP15.71■□□□□ 0.11
TRERNA1-201ENST00000431460 ZNF330Q9Y3S2 320 aaPredicted RBP15.71■□□□□ 0.11
TRERNA1-201ENST00000431460 SOS1Q07889 1333 aaPredicted RBP15.7■□□□□ 0.1
TRERNA1-201ENST00000431460 USP42Q9H9J4 1324 aaKnown RBP15.7■□□□□ 0.1
TRERNA1-201ENST00000431460 VSIG10Q8N0Z9 540 aa15.7■□□□□ 0.1
TRERNA1-201ENST00000431460 NLGN1Q8N2Q7 840 aa15.7■□□□□ 0.1
TRERNA1-201ENST00000431460 FMNL2Q96PY5 1086 aa15.7■□□□□ 0.1
TRERNA1-201ENST00000431460 THUMPD2Q9BTF0 503 aaKnown RBP15.7■□□□□ 0.1
TRERNA1-201ENST00000431460 COL15A1P39059 1388 aa15.7■□□□□ 0.1
TRERNA1-201ENST00000431460 UTRNP46939 3433 aa15.7■□□□□ 0.1
TRERNA1-201ENST00000431460 STARD3NLO95772 234 aa15.69■□□□□ 0.1
TRERNA1-201ENST00000431460 FKBP8Q14318 412 aa15.69■□□□□ 0.1
TRERNA1-201ENST00000431460 NFE2L2Q16236 605 aa15.69■□□□□ 0.1
TRERNA1-201ENST00000431460 CCDC146Q8IYE0 955 aa15.69■□□□□ 0.1
TRERNA1-201ENST00000431460 MIS18AQ9NYP9 233 aa15.69■□□□□ 0.1
TRERNA1-201ENST00000431460 CD2APQ9Y5K6 639 aa15.69■□□□□ 0.1
TRERNA1-201ENST00000431460 ZPR1O75312 459 aa15.68■□□□□ 0.1
TRERNA1-201ENST00000431460 USPL1Q5W0Q7 1092 aa15.68■□□□□ 0.1
TRERNA1-201ENST00000431460 PARP3Q9Y6F1 533 aa15.68■□□□□ 0.1
TRERNA1-201ENST00000431460 DLG5Q8TDM6 1919 aa15.68■□□□□ 0.1
TRERNA1-201ENST00000431460 GOLGB1Q14789 3259 aaKnown RBP15.67■□□□□ 0.1
TRERNA1-201ENST00000431460 PRAMEF22A3QJZ6 481 aa15.67■□□□□ 0.1
TRERNA1-201ENST00000431460 HTATSF1O43719 755 aaKnown RBP15.67■□□□□ 0.1
TRERNA1-201ENST00000431460 YBX3P16989 372 aaKnown RBP eCLIP15.67■□□□□ 0.1
TRERNA1-201ENST00000431460 PIP4K2AP48426 406 aaPredicted RBP15.67■□□□□ 0.1
TRERNA1-201ENST00000431460 MIER1Q8N108 512 aa15.67■□□□□ 0.1
TRERNA1-201ENST00000431460 RUNDC1Q96C34 613 aa15.67■□□□□ 0.1
TRERNA1-201ENST00000431460 RRP7AQ9Y3A4 280 aaKnown RBP15.66■□□□□ 0.1
TRERNA1-201ENST00000431460 A1BGP04217 495 aa15.65■□□□□ 0.1
TRERNA1-201ENST00000431460 DDR1Q08345 913 aa15.65■□□□□ 0.1
TRERNA1-201ENST00000431460 TAF7Q15545 349 aaPredicted RBP15.65■□□□□ 0.1
TRERNA1-201ENST00000431460 NEUROD2Q15784 382 aa15.65■□□□□ 0.1
TRERNA1-201ENST00000431460 TEX13AQ9BXU3 409 aaPredicted RBP15.65■□□□□ 0.1
TRERNA1-201ENST00000431460 RIPK4P57078 832 aa15.64■□□□□ 0.09
TRERNA1-201ENST00000431460 C10orf71Q711Q0 1435 aa15.64■□□□□ 0.09
TRERNA1-201ENST00000431460 NARFQ9UHQ1 456 aa15.64■□□□□ 0.09
TRERNA1-201ENST00000431460 BICDL1Q6ZP65 573 aa15.63■□□□□ 0.09
TRERNA1-201ENST00000431460 NPM2Q86SE8 214 aaKnown RBP15.63■□□□□ 0.09
TRERNA1-201ENST00000431460 TBC1D2BQ9UPU7 963 aa15.63■□□□□ 0.09
TRERNA1-201ENST00000431460 USP16Q9Y5T5 823 aa15.63■□□□□ 0.09
TRERNA1-201ENST00000431460 PXDNLA1KZ92 1463 aa15.63■□□□□ 0.09
TRERNA1-201ENST00000431460 SNRPA1P09661 255 aaKnown RBP15.62■□□□□ 0.09
TRERNA1-201ENST00000431460 TMPOP42166 694 aaKnown RBP15.62■□□□□ 0.09
TRERNA1-201ENST00000431460 EIF5P55010 431 aaKnown RBP15.62■□□□□ 0.09
TRERNA1-201ENST00000431460 N4BP2Q86UW6 1770 aaPredicted RBP15.62■□□□□ 0.09
TRERNA1-201ENST00000431460 A0A0G2JLW4 131 aa15.61■□□□□ 0.09
TRERNA1-201ENST00000431460 POLRMTO00411 1230 aaKnown RBP15.61■□□□□ 0.09
TRERNA1-201ENST00000431460 NFIXQ14938 502 aa15.61■□□□□ 0.09
TRERNA1-201ENST00000431460 FAM9BQ8IZU0 186 aa15.61■□□□□ 0.09
TRERNA1-201ENST00000431460 BCL2L12Q9HB09 334 aa15.61■□□□□ 0.09
TRERNA1-201ENST00000431460 KDM3BQ7LBC6 1761 aa15.61■□□□□ 0.09
TRERNA1-201ENST00000431460 A0A087WZG4 1122 aa15.6■□□□□ 0.09
TRERNA1-201ENST00000431460 GRIN3BO60391 1043 aa15.6■□□□□ 0.09
TRERNA1-201ENST00000431460 IL6STP40189 918 aaPredicted RBP15.6■□□□□ 0.09
TRERNA1-201ENST00000431460 SCN7AQ01118 1682 aa15.6■□□□□ 0.09
TRERNA1-201ENST00000431460 KIAA1551Q9HCM1 1747 aa15.6■□□□□ 0.09
TRERNA1-201ENST00000431460 KIF13BQ9NQT8 1826 aa15.59■□□□□ 0.09
TRERNA1-201ENST00000431460 DPEP1P16444 411 aa15.59■□□□□ 0.09
TRERNA1-201ENST00000431460 TM4SF1P30408 202 aa15.59■□□□□ 0.09
TRERNA1-201ENST00000431460 TSPYL4Q9UJ04 414 aa15.59■□□□□ 0.09
TRERNA1-201ENST00000431460 APAF1O14727 1248 aa15.58■□□□□ 0.08
TRERNA1-201ENST00000431460 LMOD3Q0VAK6 560 aa15.58■□□□□ 0.08
TRERNA1-201ENST00000431460 TBC1D9BQ66K14 1250 aa15.58■□□□□ 0.08
TRERNA1-201ENST00000431460 DZIP3Q86Y13 1208 aaKnown RBP15.58■□□□□ 0.08
TRERNA1-201ENST00000431460 BCS1LQ9Y276 419 aa15.58■□□□□ 0.08
TRERNA1-201ENST00000431460 LAMB4A4D0S4 1761 aa15.57■□□□□ 0.08
TRERNA1-201ENST00000431460 CHRNA5P30532 468 aa15.57■□□□□ 0.08
TRERNA1-201ENST00000431460 EIF4A1P60842 406 aaKnown RBP15.57■□□□□ 0.08
TRERNA1-201ENST00000431460 TGFB2P61812 414 aa15.57■□□□□ 0.08
TRERNA1-201ENST00000431460 NGEFQ8N5V2 710 aa15.57■□□□□ 0.08
TRERNA1-201ENST00000431460 LAS1LQ9Y4W2 734 aaKnown RBP15.57■□□□□ 0.08
TRERNA1-201ENST00000431460 CHD4Q14839 1912 aa15.56■□□□□ 0.08
TRERNA1-201ENST00000431460 NBPF26B4DH59 902 aa15.56■□□□□ 0.08
TRERNA1-201ENST00000431460 SERPINB2P05120 415 aa15.56■□□□□ 0.08
TRERNA1-201ENST00000431460 NCBP3Q53F19 620 aaKnown RBP15.56■□□□□ 0.08
TRERNA1-201ENST00000431460 NBPF10Q6P3W6 841 aaKnown RBP15.56■□□□□ 0.08
TRERNA1-201ENST00000431460 NBPF15Q8N660 670 aa15.56■□□□□ 0.08
TRERNA1-201ENST00000431460 CARMIL3Q8ND23 1372 aa15.55■□□□□ 0.08
TRERNA1-201ENST00000431460 SENP3-EIF4A1A0A087X0R7 540 aa15.55■□□□□ 0.08
TRERNA1-201ENST00000431460 GIGYF1O75420 1035 aaPredicted RBP15.55■□□□□ 0.08
TRERNA1-201ENST00000431460 CAMTA2O94983 1202 aa15.55■□□□□ 0.08
TRERNA1-201ENST00000431460 CCDC24Q8N4L8 307 aa15.55■□□□□ 0.08
TRERNA1-201ENST00000431460 ZNF784Q8NCA9 323 aaPredicted RBP15.55■□□□□ 0.08
TRERNA1-201ENST00000431460 TRIM35Q9UPQ4 493 aa15.55■□□□□ 0.08
TRERNA1-201ENST00000431460 AFDNP55196 1824 aaKnown RBP15.54■□□□□ 0.08
TRERNA1-201ENST00000431460 BCORQ6W2J9 1755 aa15.54■□□□□ 0.08
TRERNA1-201ENST00000431460 NPHP1O15259 732 aa15.54■□□□□ 0.08
TRERNA1-201ENST00000431460 MYL6BP14649 208 aa15.54■□□□□ 0.08
TRERNA1-201ENST00000431460 NRXN2Q9P2S2 1712 aa15.52■□□□□ 0.08
TRERNA1-201ENST00000431460 EIF2S2P20042 333 aaKnown RBP15.52■□□□□ 0.08
TRERNA1-201ENST00000431460 KCNA3P22001 575 aa15.52■□□□□ 0.08
TRERNA1-201ENST00000431460 CCDC27Q2M243 656 aa15.52■□□□□ 0.08
TRERNA1-201ENST00000431460 NECTIN2Q92692 538 aa15.52■□□□□ 0.08
TRERNA1-201ENST00000431460 SETDB2Q96T68 719 aa15.52■□□□□ 0.08
TRERNA1-201ENST00000431460 PIM2Q9P1W9 311 aa15.52■□□□□ 0.08
TRERNA1-201ENST00000431460 FAM177BA6PVY3 158 aa15.51■□□□□ 0.07
TRERNA1-201ENST00000431460 ARHGAP27Q6ZUM4 889 aa15.51■□□□□ 0.07
TRERNA1-201ENST00000431460 ZNF652Q9Y2D9 606 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms