RNA–Protein interactions for RNA: ENST00000430029.1

PTCD1-203, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-203ENST00000430029 COL5A3P25940 1745 aaPredicted RBP25.01■■□□□ 1.59
PTCD1-203ENST00000430029 TCERG1O14776 1098 aaKnown RBP25.01■■□□□ 1.59
PTCD1-203ENST00000430029 EZH2Q15910 746 aaKnown RBP25.01■■□□□ 1.59
PTCD1-203ENST00000430029 SLC27A3Q5K4L6 730 aa25.01■■□□□ 1.59
PTCD1-203ENST00000430029 TAF1LQ8IZX4 1826 aa25■■□□□ 1.59
PTCD1-203ENST00000430029 BAG6P46379 1132 aa25■■□□□ 1.59
PTCD1-203ENST00000430029 A1BGP04217 495 aa24.98■■□□□ 1.59
PTCD1-203ENST00000430029 RARSP54136 660 aaKnown RBP24.98■■□□□ 1.59
PTCD1-203ENST00000430029 PDIA6Q15084 440 aa24.98■■□□□ 1.59
PTCD1-203ENST00000430029 SSH1Q8WYL5 1049 aa24.98■■□□□ 1.59
PTCD1-203ENST00000430029 MYH14Q7Z406 1995 aaKnown RBP24.97■■□□□ 1.59
PTCD1-203ENST00000430029 STARD3NLO95772 234 aa24.97■■□□□ 1.59
PTCD1-203ENST00000430029 PIP4K2AP48426 406 aaPredicted RBP24.97■■□□□ 1.59
PTCD1-203ENST00000430029 CCDC30Q5VVM6 783 aa24.97■■□□□ 1.59
PTCD1-203ENST00000430029 ZNF428Q96B54 188 aa24.97■■□□□ 1.59
PTCD1-203ENST00000430029 NBPF26B4DH59 902 aa24.96■■□□□ 1.59
PTCD1-203ENST00000430029 PROSER3Q2NL68 480 aa24.96■■□□□ 1.59
PTCD1-203ENST00000430029 NBPF14Q5TI25 921 aa24.96■■□□□ 1.59
PTCD1-203ENST00000430029 NBPF10Q6P3W6 841 aaKnown RBP24.96■■□□□ 1.59
PTCD1-203ENST00000430029 INTS5Q6P9B9 1019 aaKnown RBP24.96■■□□□ 1.59
PTCD1-203ENST00000430029 NBPF15Q8N660 670 aa24.96■■□□□ 1.59
PTCD1-203ENST00000430029 BCL2L13Q9BXK5 485 aa24.96■■□□□ 1.59
PTCD1-203ENST00000430029 CHPF2Q9P2E5 772 aa24.96■■□□□ 1.59
PTCD1-203ENST00000430029 ANXA1P04083 346 aa24.95■■□□□ 1.58
PTCD1-203ENST00000430029 CRKLP46109 303 aaKnown RBP24.95■■□□□ 1.58
PTCD1-203ENST00000430029 ALDH1L2Q3SY69 923 aa24.95■■□□□ 1.58
PTCD1-203ENST00000430029 RCAN3Q9UKA8 241 aa24.95■■□□□ 1.58
PTCD1-203ENST00000430029 ZBTB1Q9Y2K1 713 aa24.95■■□□□ 1.58
PTCD1-203ENST00000430029 RREB1Q92766 1687 aa24.94■■□□□ 1.58
PTCD1-203ENST00000430029 CNTNAP4Q9C0A0 1308 aa24.94■■□□□ 1.58
PTCD1-203ENST00000430029 MRPL50Q8N5N7 158 aaKnown RBP24.94■■□□□ 1.58
PTCD1-203ENST00000430029 ERBB4Q15303 1308 aa24.93■■□□□ 1.58
PTCD1-203ENST00000430029 C4BP0C0L5 1744 aa24.93■■□□□ 1.58
PTCD1-203ENST00000430029 BCAR3O75815 825 aa24.93■■□□□ 1.58
PTCD1-203ENST00000430029 LRP10Q7Z4F1 713 aa24.93■■□□□ 1.58
PTCD1-203ENST00000430029 DDX21Q9NR30 783 aaKnown RBP eCLIP24.93■■□□□ 1.58
PTCD1-203ENST00000430029 CCDC87Q9NVE4 849 aa24.93■■□□□ 1.58
PTCD1-203ENST00000430029 CHMP4AQ9BY43 222 aa24.92■■□□□ 1.58
PTCD1-203ENST00000430029 DBF4Q9UBU7 674 aaPredicted RBP24.92■■□□□ 1.58
PTCD1-203ENST00000430029 SLC4A2P04920 1241 aa24.91■■□□□ 1.58
PTCD1-203ENST00000430029 MYL6BP14649 208 aa24.91■■□□□ 1.58
PTCD1-203ENST00000430029 CANXP27824 592 aaKnown RBP24.91■■□□□ 1.58
PTCD1-203ENST00000430029 RC3H1Q5TC82 1133 aaKnown RBP24.91■■□□□ 1.58
PTCD1-203ENST00000430029 STK31Q9BXU1 1019 aa24.91■■□□□ 1.58
PTCD1-203ENST00000430029 SMC4Q9NTJ3 1288 aa24.91■■□□□ 1.58
PTCD1-203ENST00000430029 G2E3Q7L622 706 aa24.9■■□□□ 1.58
PTCD1-203ENST00000430029 NUP188Q5SRE5 1749 aa24.89■■□□□ 1.58
PTCD1-203ENST00000430029 PHAXQ9H814 394 aaKnown RBP24.89■■□□□ 1.58
PTCD1-203ENST00000430029 CACNA1FO60840 1977 aa24.88■■□□□ 1.57
PTCD1-203ENST00000430029 CENPBP07199 599 aaPredicted RBP24.88■■□□□ 1.57
PTCD1-203ENST00000430029 AMIGO3Q86WK7 504 aa24.88■■□□□ 1.57
PTCD1-203ENST00000430029 AKT1S1Q96B36 256 aa24.88■■□□□ 1.57
PTCD1-203ENST00000430029 BRPF1P55201 1214 aaPredicted RBP24.87■■□□□ 1.57
PTCD1-203ENST00000430029 ZNF827Q17R98 1081 aa24.87■■□□□ 1.57
PTCD1-203ENST00000430029 SMIM5Q71RC9 77 aa24.87■■□□□ 1.57
PTCD1-203ENST00000430029 HYPKQ9NX55 129 aa24.87■■□□□ 1.57
PTCD1-203ENST00000430029 RPS6KA4O75676 772 aa24.86■■□□□ 1.57
PTCD1-203ENST00000430029 IL6STP40189 918 aaPredicted RBP24.86■■□□□ 1.57
PTCD1-203ENST00000430029 EIF5P55010 431 aaKnown RBP24.86■■□□□ 1.57
PTCD1-203ENST00000430029 AK7Q96M32 723 aa24.86■■□□□ 1.57
PTCD1-203ENST00000430029 GNPATO15228 680 aa24.85■■□□□ 1.57
PTCD1-203ENST00000430029 ANO8Q9HCE9 1232 aaPredicted RBP24.85■■□□□ 1.57
PTCD1-203ENST00000430029 UBR3Q6ZT12 1888 aa24.84■■□□□ 1.57
PTCD1-203ENST00000430029 XAGE3Q8WTP9 111 aa24.84■■□□□ 1.57
PTCD1-203ENST00000430029 NOB1Q9ULX3 412 aaKnown RBP24.84■■□□□ 1.57
PTCD1-203ENST00000430029 ZNF330Q9Y3S2 320 aaPredicted RBP24.84■■□□□ 1.57
PTCD1-203ENST00000430029 HMGB2P26583 209 aaKnown RBP24.83■■□□□ 1.57
PTCD1-203ENST00000430029 FLIIQ13045 1269 aa24.83■■□□□ 1.57
PTCD1-203ENST00000430029 COPS6Q7L5N1 327 aa24.83■■□□□ 1.57
PTCD1-203ENST00000430029 AIMP1Q12904 312 aaKnown RBP24.82■■□□□ 1.56
PTCD1-203ENST00000430029 TTLL7Q6ZT98 887 aa24.82■■□□□ 1.56
PTCD1-203ENST00000430029 RTCBQ9Y3I0 505 aaKnown RBP24.82■■□□□ 1.56
PTCD1-203ENST00000430029 TUBGCP6Q96RT7 1819 aa24.81■■□□□ 1.56
PTCD1-203ENST00000430029 COL15A1P39059 1388 aa24.8■■□□□ 1.56
PTCD1-203ENST00000430029 KIF16BQ96L93 1317 aa24.8■■□□□ 1.56
PTCD1-203ENST00000430029 SLC15A2Q16348 729 aa24.79■■□□□ 1.56
PTCD1-203ENST00000430029 FRAT1Q92837 279 aaPredicted RBP24.79■■□□□ 1.56
PTCD1-203ENST00000430029 PLIN1O60240 522 aa24.78■■□□□ 1.56
PTCD1-203ENST00000430029 PHF14O94880 888 aa24.78■■□□□ 1.56
PTCD1-203ENST00000430029 ARHGEF1Q92888 912 aaKnown RBP24.78■■□□□ 1.56
PTCD1-203ENST00000430029 STK32BQ9NY57 414 aa24.78■■□□□ 1.56
PTCD1-203ENST00000430029 TBC1D2BQ9UPU7 963 aa24.78■■□□□ 1.56
PTCD1-203ENST00000430029 TNNQ9UQP3 1299 aa24.78■■□□□ 1.56
PTCD1-203ENST00000430029 SUPT16HQ9Y5B9 1047 aaKnown RBP24.78■■□□□ 1.56
PTCD1-203ENST00000430029 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.77■■□□□ 1.56
PTCD1-203ENST00000430029 SSFA2P28290 1259 aa24.77■■□□□ 1.56
PTCD1-203ENST00000430029 FKBP5Q13451 457 aaPredicted RBP24.77■■□□□ 1.56
PTCD1-203ENST00000430029 DZIP3Q86Y13 1208 aaKnown RBP24.77■■□□□ 1.56
PTCD1-203ENST00000430029 TFCP2L1Q9NZI6 479 aa24.77■■□□□ 1.56
PTCD1-203ENST00000430029 PTPRCP08575 1304 aa24.77■■□□□ 1.56
PTCD1-203ENST00000430029 RNF123Q5XPI4 1314 aa24.76■■□□□ 1.55
PTCD1-203ENST00000430029 ADCY9O60503 1353 aa24.76■■□□□ 1.55
PTCD1-203ENST00000430029 C4AP0C0L4 1744 aa24.75■■□□□ 1.55
PTCD1-203ENST00000430029 A0A087WZG4 1122 aa24.75■■□□□ 1.55
PTCD1-203ENST00000430029 RRP1P56182 461 aaKnown RBP24.75■■□□□ 1.55
PTCD1-203ENST00000430029 TRAPPC3LQ5T215 181 aa24.75■■□□□ 1.55
PTCD1-203ENST00000430029 ZKSCAN2Q63HK3 967 aa24.75■■□□□ 1.55
PTCD1-203ENST00000430029 ARHGAP45Q92619 1136 aa24.75■■□□□ 1.55
PTCD1-203ENST00000430029 ARXQ96QS3 562 aa24.75■■□□□ 1.55
PTCD1-203ENST00000430029 ZBTB3Q9H5J0 574 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms