RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 NEK4P51957 841 aa8.74□□□□□ -1.01
SYNPO2-202ENST00000429713 NEDD9Q14511 834 aa8.74□□□□□ -1.01
SYNPO2-202ENST00000429713 TXLNAP40222 546 aa8.74□□□□□ -1.01
SYNPO2-202ENST00000429713 NBPF9Q3BBW0 867 aa8.74□□□□□ -1.01
SYNPO2-202ENST00000429713 ANAPC15P60006 121 aa8.74□□□□□ -1.01
SYNPO2-202ENST00000429713 INTS4Q96HW7 963 aaKnown RBP8.74□□□□□ -1.01
SYNPO2-202ENST00000429713 KIAA0556O60303 1618 aa8.74□□□□□ -1.01
SYNPO2-202ENST00000429713 PTPRCP08575 1304 aa8.74□□□□□ -1.01
SYNPO2-202ENST00000429713 ZNF396Q96N95 335 aaPredicted RBP8.74□□□□□ -1.01
SYNPO2-202ENST00000429713 LRRFIP2Q9Y608 721 aaKnown RBP8.74□□□□□ -1.01
SYNPO2-202ENST00000429713 EXOSC9Q06265 439 aaKnown RBP8.74□□□□□ -1.01
SYNPO2-202ENST00000429713 UBE2HP62256 183 aa8.74□□□□□ -1.01
SYNPO2-202ENST00000429713 IFFO1Q0D2I5 559 aa8.74□□□□□ -1.01
SYNPO2-202ENST00000429713 KLHL10Q6JEL2 608 aa8.74□□□□□ -1.01
SYNPO2-202ENST00000429713 MAP2P11137 1827 aaKnown RBP8.74□□□□□ -1.01
SYNPO2-202ENST00000429713 ERC2O15083 957 aa8.74□□□□□ -1.01
SYNPO2-202ENST00000429713 FKBP5Q13451 457 aaPredicted RBP8.74□□□□□ -1.01
SYNPO2-202ENST00000429713 CABP2Q9NPB3 220 aa8.74□□□□□ -1.01
SYNPO2-202ENST00000429713 PTPRKQ15262 1439 aa8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 CNTROBQ8N137 903 aa8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 NGDNQ8NEJ9 315 aaKnown RBP8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 TBC1D2Q9BYX2 928 aa8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 AEBP2Q6ZN18 517 aaPredicted RBP8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 RPAP2Q8IXW5 612 aaPredicted RBP8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 NECTIN2Q92692 538 aa8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 DDX12PQ92771 950 aa8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 CCDC27Q2M243 656 aa8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 CROCCP2Q86T23 111 aa8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 TCOF1Q13428 1488 aaKnown RBP8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 BCORL1Q5H9F3 1711 aa8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 FAM69CQ0P6D2 419 aa8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 HSP90AB4PQ58FF6 505 aa8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 IFIT2P09913 472 aaKnown RBP8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 PIP4K2BP78356 416 aa8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 TNPO1Q92973 898 aaKnown RBP8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 ANKRD27Q96NW4 1050 aa8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 PPP1R1BQ9UD71 204 aaPredicted RBP8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 SH3GL3Q99963 347 aa8.73□□□□□ -1.01
SYNPO2-202ENST00000429713 SKILP12757 684 aa8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 SEPT6Q14141 434 aa8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 HDXQ7Z353 690 aa8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 RRAGDQ9NQL2 400 aaPredicted RBP8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 OPA1O60313 960 aa8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 DNAJC8O75937 253 aaPredicted RBP8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 IMMTQ16891 758 aaKnown RBP8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 NBPF11Q86T75 865 aa8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 CCDC65Q8IXS2 484 aa8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 SMARCC1Q92922 1105 aaPredicted RBP8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 PPP6R1Q9UPN7 881 aa8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 SCAF11Q99590 1463 aaKnown RBP8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 ERICH4A6NGS2 130 aa8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 RLBP1P12271 317 aa8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 MPHOSPH6Q99547 160 aaKnown RBP8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 XPCQ01831 940 aaPredicted RBP8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 MUM1L1Q5H9M0 696 aa8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 OLFM4Q6UX06 510 aa8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 JRKLQ9Y4A0 524 aa8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 GGNBP2Q9H3C7 697 aa8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 KIAA0586Q9BVV6 1533 aa8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 DHX16O60231 1041 aaKnown RBP8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 CFAP70Q5T0N1 1121 aa8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 TSPYL4Q9UJ04 414 aa8.72□□□□□ -1.01
SYNPO2-202ENST00000429713 NUTM2FA1L443 756 aa8.71□□□□□ -1.01
SYNPO2-202ENST00000429713 HOXA7P31268 230 aaPredicted RBP8.71□□□□□ -1.01
SYNPO2-202ENST00000429713 ATL3Q6DD88 541 aa8.71□□□□□ -1.01
SYNPO2-202ENST00000429713 TMEM132EQ6IEE7 984 aa8.71□□□□□ -1.01
SYNPO2-202ENST00000429713 CPLX2Q6PUV4 134 aaKnown RBP8.71□□□□□ -1.01
SYNPO2-202ENST00000429713 SETDB1Q15047 1291 aa8.71□□□□□ -1.01
SYNPO2-202ENST00000429713 STMN4Q9H169 189 aaPredicted RBP8.71□□□□□ -1.01
SYNPO2-202ENST00000429713 NPHP1O15259 732 aa8.71□□□□□ -1.01
SYNPO2-202ENST00000429713 RARSP54136 660 aaKnown RBP8.71□□□□□ -1.01
SYNPO2-202ENST00000429713 MAP2K1Q02750 393 aaPredicted RBP8.71□□□□□ -1.01
SYNPO2-202ENST00000429713 BRD3Q15059 726 aa8.71□□□□□ -1.01
SYNPO2-202ENST00000429713 CCDC40Q4G0X9 1142 aa8.71□□□□□ -1.01
SYNPO2-202ENST00000429713 LTV1Q96GA3 475 aaPredicted RBP8.71□□□□□ -1.01
SYNPO2-202ENST00000429713 VEZTQ9HBM0 779 aa8.71□□□□□ -1.01
SYNPO2-202ENST00000429713 PLXNC1O60486 1568 aa8.71□□□□□ -1.01
SYNPO2-202ENST00000429713 TNNT1P13805 278 aa8.71□□□□□ -1.01
SYNPO2-202ENST00000429713 CEP135Q66GS9 1140 aa8.71□□□□□ -1.02
SYNPO2-202ENST00000429713 GDAP1L1Q96MZ0 367 aa8.71□□□□□ -1.02
SYNPO2-202ENST00000429713 MAGEA9P43362 315 aa8.71□□□□□ -1.02
SYNPO2-202ENST00000429713 WWC2Q6AWC2 1192 aa8.71□□□□□ -1.02
SYNPO2-202ENST00000429713 CNKSR2Q8WXI2 1034 aa8.71□□□□□ -1.02
SYNPO2-202ENST00000429713 DISP3Q9P2K9 1392 aa8.71□□□□□ -1.02
SYNPO2-202ENST00000429713 CKAP4Q07065 602 aaKnown RBP8.71□□□□□ -1.02
SYNPO2-202ENST00000429713 TCP11Q8WWU5 503 aa8.71□□□□□ -1.02
SYNPO2-202ENST00000429713 SLC12A5Q9H2X9 1139 aa8.71□□□□□ -1.02
SYNPO2-202ENST00000429713 SYCE3A1L190 88 aa8.71□□□□□ -1.02
SYNPO2-202ENST00000429713 ENOX2Q16206 610 aaKnown RBP8.71□□□□□ -1.02
SYNPO2-202ENST00000429713 IFT74Q96LB3 600 aa8.7□□□□□ -1.02
SYNPO2-202ENST00000429713 SHROOM2Q13796 1616 aa8.7□□□□□ -1.02
SYNPO2-202ENST00000429713 KIF4BQ2VIQ3 1234 aa8.7□□□□□ -1.02
SYNPO2-202ENST00000429713 TWISTNBQ3B726 338 aaPredicted RBP8.7□□□□□ -1.02
SYNPO2-202ENST00000429713 TMEM57Q8N5G2 664 aa8.7□□□□□ -1.02
SYNPO2-202ENST00000429713 GFM2Q969S9 779 aaKnown RBP8.7□□□□□ -1.02
SYNPO2-202ENST00000429713 TCHPQ9BT92 498 aa8.7□□□□□ -1.02
SYNPO2-202ENST00000429713 SPHKAPQ2M3C7 1700 aa8.7□□□□□ -1.02
SYNPO2-202ENST00000429713 CEP104O60308 925 aa8.7□□□□□ -1.02
SYNPO2-202ENST00000429713 WHAMMP3Q1A5X7 153 aa8.7□□□□□ -1.02
SYNPO2-202ENST00000429713 MCTP2Q6DN12 878 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms