RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 CCDC30Q5VVM6 783 aa21.91■■□□□ 1.1
LINC00887-203ENST00000429578 COL5A3P25940 1745 aaPredicted RBP21.91■■□□□ 1.1
LINC00887-203ENST00000429578 TAF1LQ8IZX4 1826 aa21.9■■□□□ 1.1
LINC00887-203ENST00000429578 BCAR3O75815 825 aa21.9■■□□□ 1.1
LINC00887-203ENST00000429578 SMC4Q9NTJ3 1288 aa21.9■■□□□ 1.1
LINC00887-203ENST00000429578 SUPT16HQ9Y5B9 1047 aaKnown RBP21.9■■□□□ 1.1
LINC00887-203ENST00000429578 EIF2S2P20042 333 aaKnown RBP21.89■■□□□ 1.1
LINC00887-203ENST00000429578 BCL2L13Q9BXK5 485 aa21.89■■□□□ 1.1
LINC00887-203ENST00000429578 SLC4A9Q96Q91 983 aa21.89■■□□□ 1.09
LINC00887-203ENST00000429578 TEX13AQ9BXU3 409 aaPredicted RBP21.89■■□□□ 1.09
LINC00887-203ENST00000429578 USP16Q9Y5T5 823 aa21.89■■□□□ 1.09
LINC00887-203ENST00000429578 LOC102724428A0A0B4J2F2 783 aa21.88■■□□□ 1.09
LINC00887-203ENST00000429578 BRPF1P55201 1214 aaPredicted RBP21.88■■□□□ 1.09
LINC00887-203ENST00000429578 SIK1P57059 783 aa21.88■■□□□ 1.09
LINC00887-203ENST00000429578 TCERG1O14776 1098 aaKnown RBP21.87■■□□□ 1.09
LINC00887-203ENST00000429578 NECTIN2Q92692 538 aa21.87■■□□□ 1.09
LINC00887-203ENST00000429578 STK31Q9BXU1 1019 aa21.87■■□□□ 1.09
LINC00887-203ENST00000429578 RNF123Q5XPI4 1314 aa21.87■■□□□ 1.09
LINC00887-203ENST00000429578 MRPL50Q8N5N7 158 aaKnown RBP21.86■■□□□ 1.09
LINC00887-203ENST00000429578 MYH14Q7Z406 1995 aaKnown RBP21.85■■□□□ 1.09
LINC00887-203ENST00000429578 ATP6V1AP38606 617 aa21.85■■□□□ 1.09
LINC00887-203ENST00000429578 DNAJC10Q8IXB1 793 aa21.85■■□□□ 1.09
LINC00887-203ENST00000429578 PROM2Q8N271 834 aa21.85■■□□□ 1.09
LINC00887-203ENST00000429578 DBF4Q9UBU7 674 aaPredicted RBP21.85■■□□□ 1.09
LINC00887-203ENST00000429578 SLC4A2P04920 1241 aa21.84■■□□□ 1.09
LINC00887-203ENST00000429578 CHPF2Q9P2E5 772 aa21.84■■□□□ 1.09
LINC00887-203ENST00000429578 KIF16BQ96L93 1317 aa21.84■■□□□ 1.09
LINC00887-203ENST00000429578 STARD3NLO95772 234 aa21.83■■□□□ 1.09
LINC00887-203ENST00000429578 RRP1P56182 461 aaKnown RBP21.83■■□□□ 1.09
LINC00887-203ENST00000429578 TXNRD1Q16881 649 aa21.83■■□□□ 1.09
LINC00887-203ENST00000429578 ANO8Q9HCE9 1232 aaPredicted RBP21.83■■□□□ 1.09
LINC00887-203ENST00000429578 ERBB4Q15303 1308 aa21.83■■□□□ 1.08
LINC00887-203ENST00000429578 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.83■■□□□ 1.08
LINC00887-203ENST00000429578 DDX21Q9NR30 783 aaKnown RBP eCLIP21.82■■□□□ 1.08
LINC00887-203ENST00000429578 CYP19A1P11511 503 aaPredicted RBP21.81■■□□□ 1.08
LINC00887-203ENST00000429578 ITPK1Q13572 414 aa21.81■■□□□ 1.08
LINC00887-203ENST00000429578 PDIA6Q15084 440 aa21.81■■□□□ 1.08
LINC00887-203ENST00000429578 FRAT1Q92837 279 aaPredicted RBP21.81■■□□□ 1.08
LINC00887-203ENST00000429578 NOB1Q9ULX3 412 aaKnown RBP21.8■■□□□ 1.08
LINC00887-203ENST00000429578 CCNL1Q9UK58 526 aaPredicted RBP21.8■■□□□ 1.08
LINC00887-203ENST00000429578 IPO8O15397 1037 aaKnown RBP21.79■■□□□ 1.08
LINC00887-203ENST00000429578 PLIN1O60240 522 aa21.79■■□□□ 1.08
LINC00887-203ENST00000429578 HYPKQ9NX55 129 aa21.79■■□□□ 1.08
LINC00887-203ENST00000429578 A1BGP04217 495 aa21.78■■□□□ 1.08
LINC00887-203ENST00000429578 CANXP27824 592 aaKnown RBP21.78■■□□□ 1.08
LINC00887-203ENST00000429578 PROSER3Q2NL68 480 aa21.78■■□□□ 1.08
LINC00887-203ENST00000429578 ZKSCAN2Q63HK3 967 aa21.78■■□□□ 1.08
LINC00887-203ENST00000429578 G2E3Q7L622 706 aa21.78■■□□□ 1.08
LINC00887-203ENST00000429578 ARHGAP45Q92619 1136 aa21.78■■□□□ 1.08
LINC00887-203ENST00000429578 NBPF26B4DH59 902 aa21.77■■□□□ 1.08
LINC00887-203ENST00000429578 ANXA1P04083 346 aa21.77■■□□□ 1.08
LINC00887-203ENST00000429578 NBPF10Q6P3W6 841 aaKnown RBP21.77■■□□□ 1.08
LINC00887-203ENST00000429578 NBPF15Q8N660 670 aa21.77■■□□□ 1.08
LINC00887-203ENST00000429578 STK32BQ9NY57 414 aa21.77■■□□□ 1.08
LINC00887-203ENST00000429578 PTPRCP08575 1304 aa21.77■■□□□ 1.08
LINC00887-203ENST00000429578 C4BP0C0L5 1744 aa21.77■■□□□ 1.08
LINC00887-203ENST00000429578 MYL6BP14649 208 aa21.77■■□□□ 1.08
LINC00887-203ENST00000429578 FLIIQ13045 1269 aa21.77■■□□□ 1.08
LINC00887-203ENST00000429578 SLC27A3Q5K4L6 730 aa21.77■■□□□ 1.08
LINC00887-203ENST00000429578 PHAXQ9H814 394 aaKnown RBP21.77■■□□□ 1.08
LINC00887-203ENST00000429578 SPON1Q9HCB6 807 aa21.77■■□□□ 1.08
LINC00887-203ENST00000429578 KCNQ4P56696 695 aa21.76■■□□□ 1.07
LINC00887-203ENST00000429578 ATF7IPQ6VMQ6 1270 aa21.76■■□□□ 1.07
LINC00887-203ENST00000429578 LRP10Q7Z4F1 713 aa21.76■■□□□ 1.07
LINC00887-203ENST00000429578 PIP4K2AP48426 406 aaPredicted RBP21.75■■□□□ 1.07
LINC00887-203ENST00000429578 N4BP2Q86UW6 1770 aaPredicted RBP21.75■■□□□ 1.07
LINC00887-203ENST00000429578 TRIM27P14373 513 aa21.75■■□□□ 1.07
LINC00887-203ENST00000429578 CRKLP46109 303 aaKnown RBP21.75■■□□□ 1.07
LINC00887-203ENST00000429578 LINC00116Q8NCU8 138 aa21.75■■□□□ 1.07
LINC00887-203ENST00000429578 SLC15A2Q16348 729 aa21.74■■□□□ 1.07
LINC00887-203ENST00000429578 INTS5Q6P9B9 1019 aaKnown RBP21.74■■□□□ 1.07
LINC00887-203ENST00000429578 LRRC4BQ9NT99 713 aa21.74■■□□□ 1.07
LINC00887-203ENST00000429578 CCDC87Q9NVE4 849 aa21.74■■□□□ 1.07
LINC00887-203ENST00000429578 ARFGEF2Q9Y6D5 1785 aa21.74■■□□□ 1.07
LINC00887-203ENST00000429578 CNTNAP4Q9C0A0 1308 aa21.74■■□□□ 1.07
LINC00887-203ENST00000429578 API5Q9BZZ5 524 aaKnown RBP21.73■■□□□ 1.07
LINC00887-203ENST00000429578 PPP1R1BQ9UD71 204 aaPredicted RBP21.73■■□□□ 1.07
LINC00887-203ENST00000429578 ZBTB1Q9Y2K1 713 aa21.73■■□□□ 1.07
LINC00887-203ENST00000429578 HMGB2P26583 209 aaKnown RBP21.72■■□□□ 1.07
LINC00887-203ENST00000429578 FKBP5Q13451 457 aaPredicted RBP21.72■■□□□ 1.07
LINC00887-203ENST00000429578 PDE3AQ14432 1141 aa21.72■■□□□ 1.07
LINC00887-203ENST00000429578 UBR3Q6ZT12 1888 aa21.72■■□□□ 1.07
LINC00887-203ENST00000429578 MS4A1P11836 297 aa21.72■■□□□ 1.07
LINC00887-203ENST00000429578 IL6STP40189 918 aaPredicted RBP21.72■■□□□ 1.07
LINC00887-203ENST00000429578 RC3H1Q5TC82 1133 aaKnown RBP21.72■■□□□ 1.07
LINC00887-203ENST00000429578 PDGFDQ9GZP0 370 aaPredicted RBP21.72■■□□□ 1.07
LINC00887-203ENST00000429578 CASZ1Q86V15 1759 aa21.71■■□□□ 1.07
LINC00887-203ENST00000429578 COPS6Q7L5N1 327 aa21.71■■□□□ 1.07
LINC00887-203ENST00000429578 C20orf194Q5TEA3 1177 aa21.7■■□□□ 1.06
LINC00887-203ENST00000429578 DZIP1LQ8IYY4 767 aaKnown RBP21.7■■□□□ 1.06
LINC00887-203ENST00000429578 XAGE3Q8WTP9 111 aa21.7■■□□□ 1.06
LINC00887-203ENST00000429578 CLUAP1Q96AJ1 413 aa21.7■■□□□ 1.06
LINC00887-203ENST00000429578 TNNQ9UQP3 1299 aa21.7■■□□□ 1.06
LINC00887-203ENST00000429578 AIMP1Q12904 312 aaKnown RBP21.69■■□□□ 1.06
LINC00887-203ENST00000429578 NUP98P52948 1817 aa21.69■■□□□ 1.06
LINC00887-203ENST00000429578 ZBTB7AO95365 584 aa21.69■■□□□ 1.06
LINC00887-203ENST00000429578 DDX58O95786 925 aaKnown RBP21.69■■□□□ 1.06
LINC00887-203ENST00000429578 NEFLP07196 543 aa21.69■■□□□ 1.06
LINC00887-203ENST00000429578 FTSJ3Q8IY81 847 aaKnown RBP21.69■■□□□ 1.06
LINC00887-203ENST00000429578 ABCC4O15439 1325 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms