RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 ANKRD36CQ5JPF3 1778 aa11.38□□□□□ -0.59
SMC6-204ENST00000428868 NUP98P52948 1817 aa11.37□□□□□ -0.59
SMC6-204ENST00000428868 ATF7IPQ6VMQ6 1270 aa11.37□□□□□ -0.59
SMC6-204ENST00000428868 PTF1AQ7RTS3 328 aa11.37□□□□□ -0.59
SMC6-204ENST00000428868 TNS1Q9HBL0 1735 aaKnown RBP11.36□□□□□ -0.59
SMC6-204ENST00000428868 KCNQ2O43526 872 aa11.36□□□□□ -0.59
SMC6-204ENST00000428868 SLC4A2P04920 1241 aa11.36□□□□□ -0.59
SMC6-204ENST00000428868 PIP4K2AP48426 406 aaPredicted RBP11.36□□□□□ -0.59
SMC6-204ENST00000428868 PRIM1P49642 420 aaKnown RBP11.36□□□□□ -0.59
SMC6-204ENST00000428868 PDE3AQ14432 1141 aa11.36□□□□□ -0.59
SMC6-204ENST00000428868 B4GALNT3Q6L9W6 998 aa11.36□□□□□ -0.59
SMC6-204ENST00000428868 TTC5Q8N0Z6 440 aa11.36□□□□□ -0.59
SMC6-204ENST00000428868 TMEM57Q8N5G2 664 aa11.36□□□□□ -0.59
SMC6-204ENST00000428868 SYTL4Q96C24 671 aaPredicted RBP11.36□□□□□ -0.59
SMC6-204ENST00000428868 PHAXQ9H814 394 aaKnown RBP11.36□□□□□ -0.59
SMC6-204ENST00000428868 ATG3Q9NT62 314 aa11.36□□□□□ -0.59
SMC6-204ENST00000428868 CHPF2Q9P2E5 772 aa11.36□□□□□ -0.59
SMC6-204ENST00000428868 EP400Q96L91 3159 aa11.36□□□□□ -0.59
SMC6-204ENST00000428868 CASZ1Q86V15 1759 aa11.36□□□□□ -0.59
SMC6-204ENST00000428868 ABCC4O15439 1325 aa11.35□□□□□ -0.59
SMC6-204ENST00000428868 SOS1Q07889 1333 aaPredicted RBP11.35□□□□□ -0.59
SMC6-204ENST00000428868 PTCD1O75127 700 aaKnown RBP11.35□□□□□ -0.59
SMC6-204ENST00000428868 HOXB7P09629 217 aa11.35□□□□□ -0.59
SMC6-204ENST00000428868 CCDC30Q5VVM6 783 aa11.35□□□□□ -0.59
SMC6-204ENST00000428868 SEPT12Q8IYM1 358 aa11.35□□□□□ -0.59
SMC6-204ENST00000428868 DZIP1LQ8IYY4 767 aaKnown RBP11.35□□□□□ -0.59
SMC6-204ENST00000428868 FMNL2Q96PY5 1086 aa11.35□□□□□ -0.59
SMC6-204ENST00000428868 SLC4A9Q96Q91 983 aa11.35□□□□□ -0.59
SMC6-204ENST00000428868 PPP4R2Q9NY27 417 aa11.35□□□□□ -0.59
SMC6-204ENST00000428868 USP16Q9Y5T5 823 aa11.35□□□□□ -0.59
SMC6-204ENST00000428868 ONECUT3O60422 494 aaPredicted RBP11.34□□□□□ -0.59
SMC6-204ENST00000428868 PDIA6Q15084 440 aa11.34□□□□□ -0.59
SMC6-204ENST00000428868 ERICH6BQ5W0A0 696 aa11.34□□□□□ -0.59
SMC6-204ENST00000428868 BCORQ6W2J9 1755 aa11.33□□□□□ -0.59
SMC6-204ENST00000428868 TUBGCP6Q96RT7 1819 aa11.33□□□□□ -0.6
SMC6-204ENST00000428868 SRCAPQ6ZRS2 3230 aa11.33□□□□□ -0.6
SMC6-204ENST00000428868 F6X3S4 739 aa11.33□□□□□ -0.6
SMC6-204ENST00000428868 FLIIQ13045 1269 aa11.33□□□□□ -0.6
SMC6-204ENST00000428868 MVPQ14764 893 aaKnown RBP11.33□□□□□ -0.6
SMC6-204ENST00000428868 FTSJ3Q8IY81 847 aaKnown RBP11.33□□□□□ -0.6
SMC6-204ENST00000428868 STK31Q9BXU1 1019 aa11.33□□□□□ -0.6
SMC6-204ENST00000428868 ADCY9O60503 1353 aa11.32□□□□□ -0.6
SMC6-204ENST00000428868 IPO8O15397 1037 aaKnown RBP11.32□□□□□ -0.6
SMC6-204ENST00000428868 SNRPA1P09661 255 aaKnown RBP11.32□□□□□ -0.6
SMC6-204ENST00000428868 LRP10Q7Z4F1 713 aa11.32□□□□□ -0.6
SMC6-204ENST00000428868 ITPRIPQ8IWB1 547 aa11.32□□□□□ -0.6
SMC6-204ENST00000428868 DNAJC10Q8IXB1 793 aa11.32□□□□□ -0.6
SMC6-204ENST00000428868 ARHGAP45Q92619 1136 aa11.32□□□□□ -0.6
SMC6-204ENST00000428868 PTPRCP08575 1304 aa11.32□□□□□ -0.6
SMC6-204ENST00000428868 C4AP0C0L4 1744 aa11.32□□□□□ -0.6
SMC6-204ENST00000428868 C4BP0C0L5 1744 aa11.32□□□□□ -0.6
SMC6-204ENST00000428868 PXDNLA1KZ92 1463 aa11.32□□□□□ -0.6
SMC6-204ENST00000428868 NBPF26B4DH59 902 aa11.31□□□□□ -0.6
SMC6-204ENST00000428868 NBPF14Q5TI25 921 aa11.31□□□□□ -0.6
SMC6-204ENST00000428868 NBPF10Q6P3W6 841 aaKnown RBP11.31□□□□□ -0.6
SMC6-204ENST00000428868 NBPF15Q8N660 670 aa11.31□□□□□ -0.6
SMC6-204ENST00000428868 RBM42Q9BTD8 480 aaKnown RBP11.31□□□□□ -0.6
SMC6-204ENST00000428868 API5Q9BZZ5 524 aaKnown RBP11.31□□□□□ -0.6
SMC6-204ENST00000428868 UBR3Q6ZT12 1888 aa11.3□□□□□ -0.6
SMC6-204ENST00000428868 MYL6BP14649 208 aa11.3□□□□□ -0.6
SMC6-204ENST00000428868 RBM6P78332 1123 aaKnown RBP11.3□□□□□ -0.6
SMC6-204ENST00000428868 FKBP5Q13451 457 aaPredicted RBP11.3□□□□□ -0.6
SMC6-204ENST00000428868 DBF4Q9UBU7 674 aaPredicted RBP11.3□□□□□ -0.6
SMC6-204ENST00000428868 PALLDQ8WX93 1383 aa11.29□□□□□ -0.6
SMC6-204ENST00000428868 A1BGP04217 495 aa11.29□□□□□ -0.6
SMC6-204ENST00000428868 DDX21Q9NR30 783 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMC6-204ENST00000428868 MYH3P11055 1940 aa11.29□□□□□ -0.6
SMC6-204ENST00000428868 SCN7AQ01118 1682 aa11.28□□□□□ -0.6
SMC6-204ENST00000428868 MS4A1P11836 297 aa11.28□□□□□ -0.6
SMC6-204ENST00000428868 AIMP1Q12904 312 aaKnown RBP11.28□□□□□ -0.6
SMC6-204ENST00000428868 ITPK1Q13572 414 aa11.28□□□□□ -0.6
SMC6-204ENST00000428868 INTS3Q68E01 1043 aaKnown RBP11.28□□□□□ -0.6
SMC6-204ENST00000428868 SLC4A10Q6U841 1118 aa11.28□□□□□ -0.6
SMC6-204ENST00000428868 XAGE3Q8WTP9 111 aa11.28□□□□□ -0.6
SMC6-204ENST00000428868 C1orf115Q9H7X2 142 aa11.28□□□□□ -0.6
SMC6-204ENST00000428868 PCDHB15Q9Y5E8 787 aa11.28□□□□□ -0.6
SMC6-204ENST00000428868 KCNQ4P56696 695 aa11.27□□□□□ -0.61
SMC6-204ENST00000428868 KRT27Q7Z3Y8 459 aa11.27□□□□□ -0.61
SMC6-204ENST00000428868 CCDC136Q96JN2 1154 aa11.27□□□□□ -0.61
SMC6-204ENST00000428868 DDX19BQ9UMR2 479 aa11.27□□□□□ -0.61
SMC6-204ENST00000428868 RGPD3A6NKT7 1758 aaPredicted RBP11.26□□□□□ -0.61
SMC6-204ENST00000428868 RGPD4Q7Z3J3 1758 aa11.26□□□□□ -0.61
SMC6-204ENST00000428868 PI4KAP2A4QPH2 592 aa11.26□□□□□ -0.61
SMC6-204ENST00000428868 ZBTB7BO15156 539 aaPredicted RBP11.26□□□□□ -0.61
SMC6-204ENST00000428868 CYP19A1P11511 503 aaPredicted RBP11.26□□□□□ -0.61
SMC6-204ENST00000428868 TTLL7Q6ZT98 887 aa11.26□□□□□ -0.61
SMC6-204ENST00000428868 COPS6Q7L5N1 327 aa11.26□□□□□ -0.61
SMC6-204ENST00000428868 VSIG10Q8N0Z9 540 aa11.26□□□□□ -0.61
SMC6-204ENST00000428868 PI4KAP1Q8N8J0 262 aa11.26□□□□□ -0.61
SMC6-204ENST00000428868 MEIS3Q99687 375 aa11.26□□□□□ -0.61
SMC6-204ENST00000428868 ZBTB40Q9NUA8 1239 aa11.26□□□□□ -0.61
SMC6-204ENST00000428868 HYPKQ9NX55 129 aa11.26□□□□□ -0.61
SMC6-204ENST00000428868 MAP3K2Q9Y2U5 619 aa11.26□□□□□ -0.61
SMC6-204ENST00000428868 KDM2BQ8NHM5 1336 aa11.26□□□□□ -0.61
SMC6-204ENST00000428868 ATP10DQ9P241 1426 aa11.26□□□□□ -0.61
SMC6-204ENST00000428868 LOC102724428A0A0B4J2F2 783 aa11.25□□□□□ -0.61
SMC6-204ENST00000428868 IGHDP01880 384 aa11.25□□□□□ -0.61
SMC6-204ENST00000428868 SIK1P57059 783 aa11.25□□□□□ -0.61
SMC6-204ENST00000428868 SKAP1Q86WV1 359 aa11.25□□□□□ -0.61
SMC6-204ENST00000428868 DNAAF4Q8WXU2 420 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms