RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 TRAPPC3LQ5T215 181 aa18.91■□□□□ 0.62
SGCE-204ENST00000428696 RC3H1Q5TC82 1133 aaKnown RBP18.91■□□□□ 0.62
SGCE-204ENST00000428696 INTS5Q6P9B9 1019 aaKnown RBP18.91■□□□□ 0.62
SGCE-204ENST00000428696 COL23A1Q86Y22 540 aaPredicted RBP18.91■□□□□ 0.62
SGCE-204ENST00000428696 WDR63Q8IWG1 891 aa18.91■□□□□ 0.62
SGCE-204ENST00000428696 NGEFQ8N5V2 710 aa18.91■□□□□ 0.62
SGCE-204ENST00000428696 GIGYF1O75420 1035 aaPredicted RBP18.9■□□□□ 0.62
SGCE-204ENST00000428696 ATF5Q9Y2D1 282 aaPredicted RBP18.9■□□□□ 0.62
SGCE-204ENST00000428696 PNPLA7Q6ZV29 1317 aa18.89■□□□□ 0.61
SGCE-204ENST00000428696 RPS6KA4O75676 772 aa18.89■□□□□ 0.61
SGCE-204ENST00000428696 RFC4P35249 363 aa18.89■□□□□ 0.61
SGCE-204ENST00000428696 AMIGO3Q86WK7 504 aa18.89■□□□□ 0.61
SGCE-204ENST00000428696 FLAD1Q8NFF5 587 aa18.89■□□□□ 0.61
SGCE-204ENST00000428696 SIPA1L3O60292 1781 aaPredicted RBP18.88■□□□□ 0.61
SGCE-204ENST00000428696 CNTNAP4Q9C0A0 1308 aa18.88■□□□□ 0.61
SGCE-204ENST00000428696 ZNF853P0CG23 659 aa18.88■□□□□ 0.61
SGCE-204ENST00000428696 NCBP3Q53F19 620 aaKnown RBP18.88■□□□□ 0.61
SGCE-204ENST00000428696 ZBTB1Q9Y2K1 713 aa18.88■□□□□ 0.61
SGCE-204ENST00000428696 C5P01031 1676 aa18.87■□□□□ 0.61
SGCE-204ENST00000428696 PAPPAQ13219 1627 aa18.86■□□□□ 0.61
SGCE-204ENST00000428696 C4BP0C0L5 1744 aa18.86■□□□□ 0.61
SGCE-204ENST00000428696 MYL6BP14649 208 aa18.86■□□□□ 0.61
SGCE-204ENST00000428696 SSFA2P28290 1259 aa18.86■□□□□ 0.61
SGCE-204ENST00000428696 GOLGA2Q08379 1002 aa18.86■□□□□ 0.61
SGCE-204ENST00000428696 DUSP27Q5VZP5 1158 aa18.86■□□□□ 0.61
SGCE-204ENST00000428696 MSL1Q68DK7 614 aa18.86■□□□□ 0.61
SGCE-204ENST00000428696 ARHGEF1Q92888 912 aaKnown RBP18.86■□□□□ 0.61
SGCE-204ENST00000428696 IL16Q14005 1332 aa18.86■□□□□ 0.61
SGCE-204ENST00000428696 MYH16Q9H6N6 1097 aa18.85■□□□□ 0.61
SGCE-204ENST00000428696 C8orf58Q8NAV2 365 aa18.84■□□□□ 0.61
SGCE-204ENST00000428696 SPINK5Q9NQ38 1064 aaPredicted RBP18.84■□□□□ 0.61
SGCE-204ENST00000428696 ZPR1O75312 459 aa18.83■□□□□ 0.61
SGCE-204ENST00000428696 HDGFL1Q5TGJ6 251 aa18.83■□□□□ 0.6
SGCE-204ENST00000428696 SPON1Q9HCB6 807 aa18.83■□□□□ 0.6
SGCE-204ENST00000428696 SRP68Q9UHB9 627 aaKnown RBP18.83■□□□□ 0.6
SGCE-204ENST00000428696 TBC1D2BQ9UPU7 963 aa18.83■□□□□ 0.6
SGCE-204ENST00000428696 CDCA7LQ96GN5 454 aa18.82■□□□□ 0.6
SGCE-204ENST00000428696 MTFR1LQ9H019 292 aa18.82■□□□□ 0.6
SGCE-204ENST00000428696 TAF1LQ8IZX4 1826 aa18.82■□□□□ 0.6
SGCE-204ENST00000428696 SOS1Q07889 1333 aaPredicted RBP18.81■□□□□ 0.6
SGCE-204ENST00000428696 FANCIQ9NVI1 1328 aa18.81■□□□□ 0.6
SGCE-204ENST00000428696 UBR2Q8IWV8 1755 aa18.81■□□□□ 0.6
SGCE-204ENST00000428696 TJP1Q07157 1748 aa18.81■□□□□ 0.6
SGCE-204ENST00000428696 A0A087WZG4 1122 aa18.81■□□□□ 0.6
SGCE-204ENST00000428696 NBPF26B4DH59 902 aa18.81■□□□□ 0.6
SGCE-204ENST00000428696 TCERG1O14776 1098 aaKnown RBP18.81■□□□□ 0.6
SGCE-204ENST00000428696 ANXA1P04083 346 aa18.81■□□□□ 0.6
SGCE-204ENST00000428696 IL6STP40189 918 aaPredicted RBP18.81■□□□□ 0.6
SGCE-204ENST00000428696 EXOSC9Q06265 439 aaKnown RBP18.81■□□□□ 0.6
SGCE-204ENST00000428696 NBPF10Q6P3W6 841 aaKnown RBP18.81■□□□□ 0.6
SGCE-204ENST00000428696 NBPF15Q8N660 670 aa18.81■□□□□ 0.6
SGCE-204ENST00000428696 TSPYL6Q8N831 410 aa18.81■□□□□ 0.6
SGCE-204ENST00000428696 SLC16A10Q8TF71 515 aa18.81■□□□□ 0.6
SGCE-204ENST00000428696 PPP1R1BQ9UD71 204 aaPredicted RBP18.8■□□□□ 0.6
SGCE-204ENST00000428696 KDM3BQ7LBC6 1761 aa18.79■□□□□ 0.6
SGCE-204ENST00000428696 E9PSI1 815 aa18.79■□□□□ 0.6
SGCE-204ENST00000428696 POLD1P28340 1107 aa18.79■□□□□ 0.6
SGCE-204ENST00000428696 EIF5P55010 431 aaKnown RBP18.79■□□□□ 0.6
SGCE-204ENST00000428696 AIMP1Q12904 312 aaKnown RBP18.79■□□□□ 0.6
SGCE-204ENST00000428696 TWISTNBQ3B726 338 aaPredicted RBP18.79■□□□□ 0.6
SGCE-204ENST00000428696 USPL1Q5W0Q7 1092 aa18.79■□□□□ 0.6
SGCE-204ENST00000428696 DZIP3Q86Y13 1208 aaKnown RBP18.79■□□□□ 0.6
SGCE-204ENST00000428696 ZNF521Q96K83 1311 aa18.79■□□□□ 0.6
SGCE-204ENST00000428696 COL15A1P39059 1388 aa18.78■□□□□ 0.6
SGCE-204ENST00000428696 YTHDC1Q96MU7 727 aaKnown RBP18.78■□□□□ 0.6
SGCE-204ENST00000428696 CHPF2Q9P2E5 772 aa18.78■□□□□ 0.6
SGCE-204ENST00000428696 ZNF831Q5JPB2 1677 aa18.78■□□□□ 0.6
SGCE-204ENST00000428696 KLHL34Q8N239 644 aa18.77■□□□□ 0.6
SGCE-204ENST00000428696 HOXB7P09629 217 aa18.76■□□□□ 0.59
SGCE-204ENST00000428696 SLFN5Q08AF3 891 aa18.76■□□□□ 0.59
SGCE-204ENST00000428696 PROSER3Q2NL68 480 aa18.76■□□□□ 0.59
SGCE-204ENST00000428696 BICDL1Q6ZP65 573 aa18.76■□□□□ 0.59
SGCE-204ENST00000428696 NARFQ9UHQ1 456 aa18.76■□□□□ 0.59
SGCE-204ENST00000428696 COL5A3P25940 1745 aaPredicted RBP18.76■□□□□ 0.59
SGCE-204ENST00000428696 MYH14Q7Z406 1995 aaKnown RBP18.76■□□□□ 0.59
SGCE-204ENST00000428696 GYS1P13807 737 aa18.75■□□□□ 0.59
SGCE-204ENST00000428696 CCDC30Q5VVM6 783 aa18.75■□□□□ 0.59
SGCE-204ENST00000428696 KIF6Q6ZMV9 814 aa18.75■□□□□ 0.59
SGCE-204ENST00000428696 NLGN1Q8N2Q7 840 aa18.75■□□□□ 0.59
SGCE-204ENST00000428696 CHMP4AQ9BY43 222 aa18.75■□□□□ 0.59
SGCE-204ENST00000428696 USP42Q9H9J4 1324 aaKnown RBP18.75■□□□□ 0.59
SGCE-204ENST00000428696 FKBP8Q14318 412 aa18.74■□□□□ 0.59
SGCE-204ENST00000428696 STK31Q9BXU1 1019 aa18.74■□□□□ 0.59
SGCE-204ENST00000428696 DDX21Q9NR30 783 aaKnown RBP eCLIP18.74■□□□□ 0.59
SGCE-204ENST00000428696 DBF4Q9UBU7 674 aaPredicted RBP18.74■□□□□ 0.59
SGCE-204ENST00000428696 PDIA6Q15084 440 aa18.74■□□□□ 0.59
SGCE-204ENST00000428696 COPS6Q7L5N1 327 aa18.74■□□□□ 0.59
SGCE-204ENST00000428696 ZBTB3Q9H5J0 574 aa18.74■□□□□ 0.59
SGCE-204ENST00000428696 SRCAPQ6ZRS2 3230 aa18.73■□□□□ 0.59
SGCE-204ENST00000428696 UBR3Q6ZT12 1888 aa18.73■□□□□ 0.59
SGCE-204ENST00000428696 MMP10P09238 476 aa18.73■□□□□ 0.59
SGCE-204ENST00000428696 CACNB1Q02641 598 aaPredicted RBP18.73■□□□□ 0.59
SGCE-204ENST00000428696 TTLL7Q6ZT98 887 aa18.73■□□□□ 0.59
SGCE-204ENST00000428696 XAGE3Q8WTP9 111 aa18.73■□□□□ 0.59
SGCE-204ENST00000428696 ERBB4Q15303 1308 aa18.73■□□□□ 0.59
SGCE-204ENST00000428696 TUBGCP6Q96RT7 1819 aa18.72■□□□□ 0.59
SGCE-204ENST00000428696 VAMP4O75379 141 aa18.72■□□□□ 0.59
SGCE-204ENST00000428696 HYPKQ9NX55 129 aa18.72■□□□□ 0.59
SGCE-204ENST00000428696 SLC4A2P04920 1241 aa18.71■□□□□ 0.59
SGCE-204ENST00000428696 PTGER2P43116 358 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms