RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 RRP7AQ9Y3A4 280 aaKnown RBP22.02■■□□□ 1.12
VRK2-204ENST00000428021 STARD3NLO95772 234 aa22.01■■□□□ 1.11
VRK2-204ENST00000428021 RFC4P35249 363 aa22.01■■□□□ 1.11
VRK2-204ENST00000428021 TEX13AQ9BXU3 409 aaPredicted RBP22.01■■□□□ 1.11
VRK2-204ENST00000428021 KDM3BQ7LBC6 1761 aa22■■□□□ 1.11
VRK2-204ENST00000428021 GYS1P13807 737 aa22■■□□□ 1.11
VRK2-204ENST00000428021 PRAMEF22A3QJZ6 481 aa21.99■■□□□ 1.11
VRK2-204ENST00000428021 SRP68Q9UHB9 627 aaKnown RBP21.99■■□□□ 1.11
VRK2-204ENST00000428021 NEUROD2Q15784 382 aa21.98■■□□□ 1.11
VRK2-204ENST00000428021 PNISRQ8TF01 805 aaKnown RBP21.98■■□□□ 1.11
VRK2-204ENST00000428021 TRIM35Q9UPQ4 493 aa21.98■■□□□ 1.11
VRK2-204ENST00000428021 USP16Q9Y5T5 823 aa21.98■■□□□ 1.11
VRK2-204ENST00000428021 SNRPA1P09661 255 aaKnown RBP21.97■■□□□ 1.11
VRK2-204ENST00000428021 CANXP27824 592 aaKnown RBP21.97■■□□□ 1.11
VRK2-204ENST00000428021 LMOD3Q0VAK6 560 aa21.97■■□□□ 1.11
VRK2-204ENST00000428021 NLGN1Q8N2Q7 840 aa21.97■■□□□ 1.11
VRK2-204ENST00000428021 USP42Q9H9J4 1324 aaKnown RBP21.97■■□□□ 1.11
VRK2-204ENST00000428021 A1BGP04217 495 aa21.96■■□□□ 1.11
VRK2-204ENST00000428021 EIF5P55010 431 aaKnown RBP21.96■■□□□ 1.11
VRK2-204ENST00000428021 COL15A1P39059 1388 aa21.96■■□□□ 1.11
VRK2-204ENST00000428021 MMP10P09238 476 aa21.95■■□□□ 1.1
VRK2-204ENST00000428021 EIF4A1P60842 406 aaKnown RBP21.95■■□□□ 1.1
VRK2-204ENST00000428021 KLHL34Q8N239 644 aa21.95■■□□□ 1.1
VRK2-204ENST00000428021 APAF1O14727 1248 aa21.94■■□□□ 1.1
VRK2-204ENST00000428021 FKBP8Q14318 412 aa21.94■■□□□ 1.1
VRK2-204ENST00000428021 MRS2Q9HD23 443 aa21.94■■□□□ 1.1
VRK2-204ENST00000428021 NLGN2Q8NFZ4 835 aa21.93■■□□□ 1.1
VRK2-204ENST00000428021 NARFQ9UHQ1 456 aa21.93■■□□□ 1.1
VRK2-204ENST00000428021 IL6STP40189 918 aaPredicted RBP21.92■■□□□ 1.1
VRK2-204ENST00000428021 USPL1Q5W0Q7 1092 aa21.92■■□□□ 1.1
VRK2-204ENST00000428021 CD2APQ9Y5K6 639 aa21.92■■□□□ 1.1
VRK2-204ENST00000428021 ZPR1O75312 459 aa21.91■■□□□ 1.1
VRK2-204ENST00000428021 GIGYF1O75420 1035 aaPredicted RBP21.91■■□□□ 1.1
VRK2-204ENST00000428021 BCL2L12Q9HB09 334 aa21.91■■□□□ 1.1
VRK2-204ENST00000428021 BABAM1Q9NWV8 329 aa21.91■■□□□ 1.1
VRK2-204ENST00000428021 TSPYL4Q9UJ04 414 aa21.91■■□□□ 1.1
VRK2-204ENST00000428021 NBPF26B4DH59 902 aa21.89■■□□□ 1.09
VRK2-204ENST00000428021 TM4SF1P30408 202 aa21.89■■□□□ 1.09
VRK2-204ENST00000428021 PIP4K2AP48426 406 aaPredicted RBP21.89■■□□□ 1.09
VRK2-204ENST00000428021 NBPF10Q6P3W6 841 aaKnown RBP21.89■■□□□ 1.09
VRK2-204ENST00000428021 NBPF15Q8N660 670 aa21.89■■□□□ 1.09
VRK2-204ENST00000428021 LAMB4A4D0S4 1761 aa21.89■■□□□ 1.09
VRK2-204ENST00000428021 A0A087WZG4 1122 aa21.88■■□□□ 1.09
VRK2-204ENST00000428021 CHL1O00533 1208 aa21.88■■□□□ 1.09
VRK2-204ENST00000428021 DDR1Q08345 913 aa21.88■■□□□ 1.09
VRK2-204ENST00000428021 TBC1D2BQ9UPU7 963 aa21.86■■□□□ 1.09
VRK2-204ENST00000428021 ZNF330Q9Y3S2 320 aaPredicted RBP21.86■■□□□ 1.09
VRK2-204ENST00000428021 PARP3Q9Y6F1 533 aa21.86■■□□□ 1.09
VRK2-204ENST00000428021 GOLGB1Q14789 3259 aaKnown RBP21.86■■□□□ 1.09
VRK2-204ENST00000428021 KIF13BQ9NQT8 1826 aa21.85■■□□□ 1.09
VRK2-204ENST00000428021 NFIXQ14938 502 aa21.85■■□□□ 1.09
VRK2-204ENST00000428021 C10orf71Q711Q0 1435 aa21.84■■□□□ 1.09
VRK2-204ENST00000428021 POLRMTO00411 1230 aaKnown RBP21.84■■□□□ 1.09
VRK2-204ENST00000428021 CAMTA2O94983 1202 aa21.84■■□□□ 1.09
VRK2-204ENST00000428021 SCN7AQ01118 1682 aa21.84■■□□□ 1.09
VRK2-204ENST00000428021 UTRNP46939 3433 aa21.83■■□□□ 1.09
VRK2-204ENST00000428021 DCAF8L1A6NGE4 600 aa21.83■■□□□ 1.09
VRK2-204ENST00000428021 LAS1LQ9Y4W2 734 aaKnown RBP21.83■■□□□ 1.09
VRK2-204ENST00000428021 ZNF853P0CG23 659 aa21.82■■□□□ 1.08
VRK2-204ENST00000428021 DZIP3Q86Y13 1208 aaKnown RBP21.82■■□□□ 1.08
VRK2-204ENST00000428021 CFAP44Q96MT7 982 aa21.82■■□□□ 1.08
VRK2-204ENST00000428021 KIAA1551Q9HCM1 1747 aa21.81■■□□□ 1.08
VRK2-204ENST00000428021 SENP3-EIF4A1A0A087X0R7 540 aa21.81■■□□□ 1.08
VRK2-204ENST00000428021 KRT24Q2M2I5 525 aa21.81■■□□□ 1.08
VRK2-204ENST00000428021 BCORQ6W2J9 1755 aa21.81■■□□□ 1.08
VRK2-204ENST00000428021 AFDNP55196 1824 aaKnown RBP21.8■■□□□ 1.08
VRK2-204ENST00000428021 TBC1D9BQ66K14 1250 aa21.8■■□□□ 1.08
VRK2-204ENST00000428021 NPM2Q86SE8 214 aaKnown RBP21.8■■□□□ 1.08
VRK2-204ENST00000428021 GPR162Q16538 588 aa21.79■■□□□ 1.08
VRK2-204ENST00000428021 MBIPQ9NS73 344 aa21.79■■□□□ 1.08
VRK2-204ENST00000428021 NRXN2Q9P2S2 1712 aa21.79■■□□□ 1.08
VRK2-204ENST00000428021 PXDNLA1KZ92 1463 aa21.78■■□□□ 1.08
VRK2-204ENST00000428021 YBX3P16989 372 aaKnown RBP eCLIP21.78■■□□□ 1.08
VRK2-204ENST00000428021 CCDC27Q2M243 656 aa21.78■■□□□ 1.08
VRK2-204ENST00000428021 BICDL1Q6ZP65 573 aa21.78■■□□□ 1.08
VRK2-204ENST00000428021 IFT57Q9NWB7 429 aa21.78■■□□□ 1.08
VRK2-204ENST00000428021 N4BP2Q86UW6 1770 aaPredicted RBP21.77■■□□□ 1.08
VRK2-204ENST00000428021 SERPINB2P05120 415 aa21.77■■□□□ 1.08
VRK2-204ENST00000428021 EIF2S2P20042 333 aaKnown RBP21.77■■□□□ 1.08
VRK2-204ENST00000428021 TGFB2P61812 414 aa21.77■■□□□ 1.08
VRK2-204ENST00000428021 CALD1Q05682 793 aaKnown RBP21.77■■□□□ 1.08
VRK2-204ENST00000428021 PDIA6Q15084 440 aa21.77■■□□□ 1.08
VRK2-204ENST00000428021 ERBB4Q15303 1308 aa21.77■■□□□ 1.07
VRK2-204ENST00000428021 NCBP3Q53F19 620 aaKnown RBP21.76■■□□□ 1.07
VRK2-204ENST00000428021 LRP10Q7Z4F1 713 aa21.76■■□□□ 1.07
VRK2-204ENST00000428021 WWC1Q8IX03 1113 aa21.76■■□□□ 1.07
VRK2-204ENST00000428021 PELP1Q8IZL8 1130 aaKnown RBP21.76■■□□□ 1.07
VRK2-204ENST00000428021 FAM9BQ8IZU0 186 aa21.76■■□□□ 1.07
VRK2-204ENST00000428021 A0A0G2JLW4 131 aa21.75■■□□□ 1.07
VRK2-204ENST00000428021 MYL6BP14649 208 aa21.75■■□□□ 1.07
VRK2-204ENST00000428021 GNAI1P63096 354 aa21.75■■□□□ 1.07
VRK2-204ENST00000428021 CLEC4GQ6UXB4 293 aa21.75■■□□□ 1.07
VRK2-204ENST00000428021 NGEFQ8N5V2 710 aa21.75■■□□□ 1.07
VRK2-204ENST00000428021 RGL2O15211 777 aa21.74■■□□□ 1.07
VRK2-204ENST00000428021 DPEP1P16444 411 aa21.74■■□□□ 1.07
VRK2-204ENST00000428021 PROSER3Q2NL68 480 aa21.74■■□□□ 1.07
VRK2-204ENST00000428021 TTLL7Q6ZT98 887 aa21.74■■□□□ 1.07
VRK2-204ENST00000428021 KCNA3P22001 575 aa21.73■■□□□ 1.07
VRK2-204ENST00000428021 HLFQ16534 295 aa21.73■■□□□ 1.07
VRK2-204ENST00000428021 NECTIN2Q92692 538 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 177.4 ms