RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 DNAJC5GQ8N7S2 189 aa9.03□□□□□ -0.96
NIF3L1-207ENST00000426253 SNRKQ9NRH2 765 aa9.03□□□□□ -0.96
NIF3L1-207ENST00000426253 SPATA31A5Q5VU36 1347 aa9.03□□□□□ -0.96
NIF3L1-207ENST00000426253 SPATA31A7Q8IWB4 1347 aa9.03□□□□□ -0.96
NIF3L1-207ENST00000426253 ABCA3Q99758 1704 aa9.02□□□□□ -0.96
NIF3L1-207ENST00000426253 RAB3GAP2Q9H2M9 1393 aa9.02□□□□□ -0.97
NIF3L1-207ENST00000426253 FDX1P10109 184 aa9.02□□□□□ -0.97
NIF3L1-207ENST00000426253 PDE3BQ13370 1112 aa9.02□□□□□ -0.97
NIF3L1-207ENST00000426253 CSPP1Q1MSJ5 1256 aa9.02□□□□□ -0.97
NIF3L1-207ENST00000426253 GRIPAP1Q4V328 841 aa9.02□□□□□ -0.97
NIF3L1-207ENST00000426253 SAMD7Q7Z3H4 446 aa9.02□□□□□ -0.97
NIF3L1-207ENST00000426253 FAM163AQ96GL9 167 aaPredicted RBP9.02□□□□□ -0.97
NIF3L1-207ENST00000426253 HS3ST6Q96QI5 342 aa9.02□□□□□ -0.97
NIF3L1-207ENST00000426253 CLTCL1P53675 1640 aa9.02□□□□□ -0.97
NIF3L1-207ENST00000426253 CCDC144AA2RUR9 1427 aa9.01□□□□□ -0.97
NIF3L1-207ENST00000426253 RTL5Q5HYW3 569 aaPredicted RBP9.01□□□□□ -0.97
NIF3L1-207ENST00000426253 MTFR1LQ9H019 292 aa9.01□□□□□ -0.97
NIF3L1-207ENST00000426253 ZBTB3Q9H5J0 574 aa9.01□□□□□ -0.97
NIF3L1-207ENST00000426253 POTEB3A0JP26 581 aa9□□□□□ -0.97
NIF3L1-207ENST00000426253 APBB1O00213 710 aa9□□□□□ -0.97
NIF3L1-207ENST00000426253 POTEBQ6S5H4 581 aa9□□□□□ -0.97
NIF3L1-207ENST00000426253 KRT28Q7Z3Y7 464 aa9□□□□□ -0.97
NIF3L1-207ENST00000426253 NECTIN2Q92692 538 aa9□□□□□ -0.97
NIF3L1-207ENST00000426253 ZFRQ96KR1 1074 aaKnown RBP9□□□□□ -0.97
NIF3L1-207ENST00000426253 KIF1BO60333 1816 aa9□□□□□ -0.97
NIF3L1-207ENST00000426253 AATKQ6ZMQ8 1374 aa8.99□□□□□ -0.97
NIF3L1-207ENST00000426253 MAP3K5Q99683 1374 aa8.99□□□□□ -0.97
NIF3L1-207ENST00000426253 ROBO2Q9HCK4 1378 aa8.99□□□□□ -0.97
NIF3L1-207ENST00000426253 TNS3Q68CZ2 1445 aa8.99□□□□□ -0.97
NIF3L1-207ENST00000426253 MRPL50Q8N5N7 158 aaKnown RBP8.99□□□□□ -0.97
NIF3L1-207ENST00000426253 C1orf115Q9H7X2 142 aa8.99□□□□□ -0.97
NIF3L1-207ENST00000426253 STK32BQ9NY57 414 aa8.99□□□□□ -0.97
NIF3L1-207ENST00000426253 PCDHGC3Q9UN70 934 aa8.99□□□□□ -0.97
NIF3L1-207ENST00000426253 COG6Q9Y2V7 657 aa8.99□□□□□ -0.97
NIF3L1-207ENST00000426253 ADGRF5Q8IZF2 1346 aa8.99□□□□□ -0.97
NIF3L1-207ENST00000426253 COL14A1Q05707 1796 aaKnown RBP8.99□□□□□ -0.97
NIF3L1-207ENST00000426253 ATP6V1AP38606 617 aa8.98□□□□□ -0.97
NIF3L1-207ENST00000426253 POM121Q96HA1 1249 aa8.98□□□□□ -0.97
NIF3L1-207ENST00000426253 CDC42BPGQ6DT37 1551 aa8.98□□□□□ -0.97
NIF3L1-207ENST00000426253 RGPD3A6NKT7 1758 aaPredicted RBP8.97□□□□□ -0.97
NIF3L1-207ENST00000426253 RGPD4Q7Z3J3 1758 aa8.97□□□□□ -0.97
NIF3L1-207ENST00000426253 GRIN3BO60391 1043 aa8.97□□□□□ -0.97
NIF3L1-207ENST00000426253 AP1G2O75843 785 aa8.97□□□□□ -0.97
NIF3L1-207ENST00000426253 LSM11P83369 360 aaKnown RBP eCLIP8.97□□□□□ -0.97
NIF3L1-207ENST00000426253 FUT2Q10981 343 aa8.97□□□□□ -0.97
NIF3L1-207ENST00000426253 ADGRD1Q6QNK2 874 aa8.97□□□□□ -0.97
NIF3L1-207ENST00000426253 MTMR14Q8NCE2 650 aa8.97□□□□□ -0.97
NIF3L1-207ENST00000426253 KLRG1Q96E93 195 aa8.97□□□□□ -0.97
NIF3L1-207ENST00000426253 PRM3Q9NNZ6 103 aa8.97□□□□□ -0.97
NIF3L1-207ENST00000426253 USP35Q9P2H5 1018 aa8.97□□□□□ -0.97
NIF3L1-207ENST00000426253 KIF1AQ12756 1690 aa8.97□□□□□ -0.97
NIF3L1-207ENST00000426253 ANKRD30BQ9BXX2 1392 aa8.97□□□□□ -0.97
NIF3L1-207ENST00000426253 WDR90Q96KV7 1748 aa8.97□□□□□ -0.97
NIF3L1-207ENST00000426253 HRO43593 1189 aa8.96□□□□□ -0.98
NIF3L1-207ENST00000426253 CFHP08603 1231 aa8.96□□□□□ -0.98
NIF3L1-207ENST00000426253 PSME1Q06323 249 aa8.96□□□□□ -0.98
NIF3L1-207ENST00000426253 MTMR2Q13614 643 aa8.96□□□□□ -0.98
NIF3L1-207ENST00000426253 KMT5BQ4FZB7 885 aa8.96□□□□□ -0.98
NIF3L1-207ENST00000426253 TMEM132EQ6IEE7 984 aa8.96□□□□□ -0.98
NIF3L1-207ENST00000426253 STK26Q9P289 416 aa8.96□□□□□ -0.98
NIF3L1-207ENST00000426253 SPATA31A1Q5TZJ5 1347 aa8.96□□□□□ -0.98
NIF3L1-207ENST00000426253 SPATA31E1Q6ZUB1 1445 aa8.96□□□□□ -0.98
NIF3L1-207ENST00000426253 GOLGB1Q14789 3259 aaKnown RBP8.95□□□□□ -0.98
NIF3L1-207ENST00000426253 JMYQ8N9B5 988 aa8.95□□□□□ -0.98
NIF3L1-207ENST00000426253 STRN4Q9NRL3 753 aa8.95□□□□□ -0.98
NIF3L1-207ENST00000426253 ARHGEF10O15013 1369 aa8.95□□□□□ -0.98
NIF3L1-207ENST00000426253 PLSCR1O15162 318 aa8.94□□□□□ -0.98
NIF3L1-207ENST00000426253 YBX3P16989 372 aaKnown RBP eCLIP8.94□□□□□ -0.984e-6■□□□□ 11.2
NIF3L1-207ENST00000426253 HTRA3P83110 453 aa8.94□□□□□ -0.98
NIF3L1-207ENST00000426253 GUCA2AQ02747 115 aa8.94□□□□□ -0.98
NIF3L1-207ENST00000426253 SLC15A2Q16348 729 aa8.94□□□□□ -0.98
NIF3L1-207ENST00000426253 HLA-CQ95604 372 aa8.94□□□□□ -0.98
NIF3L1-207ENST00000426253 LRCH3Q96II8 777 aa8.94□□□□□ -0.98
NIF3L1-207ENST00000426253 C14orf93Q9H972 538 aaKnown RBP8.94□□□□□ -0.98
NIF3L1-207ENST00000426253 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.94□□□□□ -0.98
NIF3L1-207ENST00000426253 TNS2Q63HR2 1409 aa8.94□□□□□ -0.98
NIF3L1-207ENST00000426253 ACTN4O43707 911 aaKnown RBP8.93□□□□□ -0.98
NIF3L1-207ENST00000426253 USP17L8P0C7I0 530 aa8.93□□□□□ -0.98
NIF3L1-207ENST00000426253 CFAP70Q5T0N1 1121 aa8.93□□□□□ -0.98
NIF3L1-207ENST00000426253 WAPLQ7Z5K2 1190 aa8.93□□□□□ -0.98
NIF3L1-207ENST00000426253 NLGN2Q8NFZ4 835 aa8.93□□□□□ -0.98
NIF3L1-207ENST00000426253 DCAF11Q8TEB1 546 aa8.93□□□□□ -0.98
NIF3L1-207ENST00000426253 PRR14Q9BWN1 585 aa8.93□□□□□ -0.98
NIF3L1-207ENST00000426253 TECPR2O15040 1411 aa8.93□□□□□ -0.98
NIF3L1-207ENST00000426253 RNF40O75150 1001 aa8.92□□□□□ -0.98
NIF3L1-207ENST00000426253 LCE2DQ5TA82 110 aaPredicted RBP8.92□□□□□ -0.98
NIF3L1-207ENST00000426253 WWC1Q8IX03 1113 aa8.92□□□□□ -0.98
NIF3L1-207ENST00000426253 STAC3Q96MF2 364 aa8.92□□□□□ -0.98
NIF3L1-207ENST00000426253 PPLO60437 1756 aa8.91□□□□□ -0.98
NIF3L1-207ENST00000426253 ADCY9O60503 1353 aa8.91□□□□□ -0.98
NIF3L1-207ENST00000426253 C6orf229H3BNL8 230 aa8.91□□□□□ -0.98
NIF3L1-207ENST00000426253 HSPA1AP0DMV8 641 aaKnown RBP8.91□□□□□ -0.98
NIF3L1-207ENST00000426253 HSPA1BP0DMV9 641 aaKnown RBP8.91□□□□□ -0.98
NIF3L1-207ENST00000426253 POLD1P28340 1107 aa8.91□□□□□ -0.98
NIF3L1-207ENST00000426253 HELBQ8NG08 1087 aaPredicted RBP8.91□□□□□ -0.98
NIF3L1-207ENST00000426253 SIRT1Q96EB6 747 aa8.91□□□□□ -0.98
NIF3L1-207ENST00000426253 GDPD2Q9HCC8 539 aa8.91□□□□□ -0.98
NIF3L1-207ENST00000426253 PRDM11Q9NQV5 511 aa8.91□□□□□ -0.98
NIF3L1-207ENST00000426253 SBNO1A3KN83 1393 aa8.9□□□□□ -0.98
NIF3L1-207ENST00000426253 DHX57Q6P158 1386 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms