RNA–Protein interactions for RNA: ENST00000425793.1

NEK2P4-201, Transcript of NEK2 pseudogene 4, humanhuman

BASIC

Gene NEK2P4, Length 1,329 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2P4-201ENST00000425793 NKX2-3Q8TAU0 364 aa9.17□□□□□ -0.94
NEK2P4-201ENST00000425793 CCDC97Q96F63 343 aaPredicted RBP9.17□□□□□ -0.94
NEK2P4-201ENST00000425793 NUDT12Q9BQG2 462 aa9.17□□□□□ -0.94
NEK2P4-201ENST00000425793 C14orf93Q9H972 538 aaKnown RBP9.17□□□□□ -0.94
NEK2P4-201ENST00000425793 ADGRB1O14514 1584 aa9.17□□□□□ -0.94
NEK2P4-201ENST00000425793 AGLP35573 1532 aa9.16□□□□□ -0.94
NEK2P4-201ENST00000425793 KCNH2Q12809 1159 aa9.16□□□□□ -0.94
NEK2P4-201ENST00000425793 CC2D1BQ5T0F9 858 aaKnown RBP9.16□□□□□ -0.94
NEK2P4-201ENST00000425793 NUDCQ9Y266 331 aa9.16□□□□□ -0.94
NEK2P4-201ENST00000425793 ASXL1Q8IXJ9 1541 aa9.16□□□□□ -0.94
NEK2P4-201ENST00000425793 ZFYVE9O95405 1425 aa9.15□□□□□ -0.94
NEK2P4-201ENST00000425793 CTHP32929 405 aa9.15□□□□□ -0.94
NEK2P4-201ENST00000425793 SLC52A1Q9NWF4 448 aa9.15□□□□□ -0.94
NEK2P4-201ENST00000425793 KNSTRNQ9Y448 316 aa9.15□□□□□ -0.94
NEK2P4-201ENST00000425793 NEXMIFQ5QGS0 1516 aa9.15□□□□□ -0.95
NEK2P4-201ENST00000425793 PPLO60437 1756 aa9.14□□□□□ -0.95
NEK2P4-201ENST00000425793 BLMP54132 1417 aaPredicted RBP9.14□□□□□ -0.95
NEK2P4-201ENST00000425793 FBXO45P0C2W1 286 aa9.14□□□□□ -0.95
NEK2P4-201ENST00000425793 PTCRAQ6ISU1 281 aaPredicted RBP9.14□□□□□ -0.95
NEK2P4-201ENST00000425793 PLA2G2EQ9NZK7 142 aa9.14□□□□□ -0.95
NEK2P4-201ENST00000425793 SIGLEC1Q9BZZ2 1709 aa9.14□□□□□ -0.95
NEK2P4-201ENST00000425793 CENPJQ9HC77 1338 aaPredicted RBP9.14□□□□□ -0.95
NEK2P4-201ENST00000425793 KDM5AP29375 1690 aaKnown RBP9.13□□□□□ -0.95
NEK2P4-201ENST00000425793 MYOM1P52179 1685 aa9.13□□□□□ -0.95
NEK2P4-201ENST00000425793 NR1H3Q13133 447 aa9.13□□□□□ -0.95
NEK2P4-201ENST00000425793 OCSTAMPQ9BR26 566 aa9.13□□□□□ -0.95
NEK2P4-201ENST00000425793 SLC6A16Q9GZN6 736 aa9.13□□□□□ -0.95
NEK2P4-201ENST00000425793 PNMA1Q8ND90 353 aa9.12□□□□□ -0.95
NEK2P4-201ENST00000425793 RNF123Q5XPI4 1314 aa9.12□□□□□ -0.95
NEK2P4-201ENST00000425793 ZC3H4Q9UPT8 1303 aaKnown RBP9.12□□□□□ -0.95
NEK2P4-201ENST00000425793 ZBBXA8MT70 800 aa9.11□□□□□ -0.95
NEK2P4-201ENST00000425793 PPP2R1AP30153 589 aa9.11□□□□□ -0.95
NEK2P4-201ENST00000425793 IDI1Q13907 227 aa9.11□□□□□ -0.95
NEK2P4-201ENST00000425793 UCN2Q96RP3 112 aa9.11□□□□□ -0.95
NEK2P4-201ENST00000425793 S1PR4O95977 384 aa9.1□□□□□ -0.95
NEK2P4-201ENST00000425793 SOX11P35716 441 aa9.1□□□□□ -0.95
NEK2P4-201ENST00000425793 IRX6P78412 446 aaPredicted RBP9.1□□□□□ -0.95
NEK2P4-201ENST00000425793 PDE3BQ13370 1112 aa9.1□□□□□ -0.95
NEK2P4-201ENST00000425793 ARHGEF40Q8TER5 1519 aa9.1□□□□□ -0.95
NEK2P4-201ENST00000425793 PREX1Q8TCU6 1659 aa9.1□□□□□ -0.95
NEK2P4-201ENST00000425793 PDXDC2PQ6P474 469 aa9.09□□□□□ -0.95
NEK2P4-201ENST00000425793 PUS7Q96PZ0 661 aaKnown RBP9.09□□□□□ -0.95
NEK2P4-201ENST00000425793 UNC93B1Q9H1C4 597 aa9.09□□□□□ -0.95
NEK2P4-201ENST00000425793 PPP4R2Q9NY27 417 aa9.09□□□□□ -0.95
NEK2P4-201ENST00000425793 TRAK1Q9UPV9 953 aa9.09□□□□□ -0.95
NEK2P4-201ENST00000425793 TMEM131LA2VDJ0 1609 aa9.09□□□□□ -0.95
NEK2P4-201ENST00000425793 TMEM132EQ6IEE7 984 aa9.08□□□□□ -0.96
NEK2P4-201ENST00000425793 CCDC24Q8N4L8 307 aa9.08□□□□□ -0.96
NEK2P4-201ENST00000425793 ARMC2Q8NEN0 867 aa9.08□□□□□ -0.96
NEK2P4-201ENST00000425793 PPP1R12CQ9BZL4 782 aa9.08□□□□□ -0.96
NEK2P4-201ENST00000425793 QRICH2Q9H0J4 1663 aa9.08□□□□□ -0.96
NEK2P4-201ENST00000425793 SPATA31D1Q6ZQQ2 1576 aa9.08□□□□□ -0.96
NEK2P4-201ENST00000425793 ITGBL1O95965 494 aaPredicted RBP9.07□□□□□ -0.96
NEK2P4-201ENST00000425793 SRPK2P78362 688 aaKnown RBP9.07□□□□□ -0.96
NEK2P4-201ENST00000425793 SEMA3FQ13275 785 aa9.07□□□□□ -0.96
NEK2P4-201ENST00000425793 GPKOWQ92917 476 aaPredicted RBP eCLIP9.07□□□□□ -0.96
NEK2P4-201ENST00000425793 CARD14Q9BXL6 1004 aa9.07□□□□□ -0.96
NEK2P4-201ENST00000425793 GPSM3Q9Y4H4 160 aa9.07□□□□□ -0.96
NEK2P4-201ENST00000425793 TULP4Q9NRJ4 1543 aa9.07□□□□□ -0.96
NEK2P4-201ENST00000425793 FCF1Q9Y324 198 aaKnown RBP9.06□□□□□ -0.96
NEK2P4-201ENST00000425793 EVC2Q86UK5 1308 aa9.06□□□□□ -0.96
NEK2P4-201ENST00000425793 PALM3A6NDB9 673 aaPredicted RBP9.05□□□□□ -0.96
NEK2P4-201ENST00000425793 WDR43Q15061 677 aaKnown RBP eCLIP9.05□□□□□ -0.96
NEK2P4-201ENST00000425793 SH3BP5LQ7L8J4 393 aa9.05□□□□□ -0.96
NEK2P4-201ENST00000425793 USP32Q8NFA0 1604 aa9.05□□□□□ -0.96
NEK2P4-201ENST00000425793 NSD3Q9BZ95 1437 aa9.05□□□□□ -0.96
NEK2P4-201ENST00000425793 NINLQ9Y2I6 1382 aa9.05□□□□□ -0.96
NEK2P4-201ENST00000425793 ARHGEF28Q8N1W1 1705 aaKnown RBP9.05□□□□□ -0.96
NEK2P4-201ENST00000425793 PPEF1O14829 653 aaPredicted RBP9.05□□□□□ -0.96
NEK2P4-201ENST00000425793 KCNC4Q03721 635 aa9.05□□□□□ -0.96
NEK2P4-201ENST00000425793 PTK2Q05397 1052 aa9.05□□□□□ -0.96
NEK2P4-201ENST00000425793 IFFO2Q5TF58 517 aa9.05□□□□□ -0.96
NEK2P4-201ENST00000425793 NBPF14Q5TI25 921 aa9.05□□□□□ -0.96
NEK2P4-201ENST00000425793 TFIP11Q9UBB9 837 aaKnown RBP9.05□□□□□ -0.96
NEK2P4-201ENST00000425793 ADAMTS8Q9UP79 889 aa9.05□□□□□ -0.96
NEK2P4-201ENST00000425793 A2ML1A8K2U0 1454 aa9.04□□□□□ -0.96
NEK2P4-201ENST00000425793 PTPRMP28827 1452 aa9.04□□□□□ -0.96
NEK2P4-201ENST00000425793 SENP3-EIF4A1A0A087X0R7 540 aa9.04□□□□□ -0.96
NEK2P4-201ENST00000425793 TBC1D9Q6ZT07 1266 aa9.04□□□□□ -0.96
NEK2P4-201ENST00000425793 SH3RF1Q7Z6J0 888 aa9.04□□□□□ -0.96
NEK2P4-201ENST00000425793 BAP1Q92560 729 aa9.04□□□□□ -0.96
NEK2P4-201ENST00000425793 YTHDC2Q9H6S0 1430 aaKnown RBP9.03□□□□□ -0.96
NEK2P4-201ENST00000425793 NSD2O96028 1365 aa9.03□□□□□ -0.96
NEK2P4-201ENST00000425793 ANKRD36BQ8N2N9 1353 aa9.03□□□□□ -0.96
NEK2P4-201ENST00000425793 PIK3CDO00329 1044 aa9.03□□□□□ -0.96
NEK2P4-201ENST00000425793 RFX1P22670 979 aa9.03□□□□□ -0.96
NEK2P4-201ENST00000425793 ADAM32Q8TC27 787 aa9.03□□□□□ -0.96
NEK2P4-201ENST00000425793 SLC12A5Q9H2X9 1139 aa9.03□□□□□ -0.96
NEK2P4-201ENST00000425793 RCAN3Q9UKA8 241 aa9.03□□□□□ -0.96
NEK2P4-201ENST00000425793 CLTCQ00610 1675 aaKnown RBP9.02□□□□□ -0.96
NEK2P4-201ENST00000425793 TSPOAP1O95153 1857 aa9.02□□□□□ -0.96
NEK2P4-201ENST00000425793 POLR3AO14802 1390 aaPredicted RBP9.02□□□□□ -0.97
NEK2P4-201ENST00000425793 CGNL1Q0VF96 1302 aa9.02□□□□□ -0.97
NEK2P4-201ENST00000425793 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.02□□□□□ -0.97
NEK2P4-201ENST00000425793 RNF223E7ERA6 249 aa9.02□□□□□ -0.97
NEK2P4-201ENST00000425793 RRP1P56182 461 aaKnown RBP9.02□□□□□ -0.97
NEK2P4-201ENST00000425793 C4orf48Q5BLP8 95 aa9.02□□□□□ -0.97
NEK2P4-201ENST00000425793 ALKQ9UM73 1620 aa9.01□□□□□ -0.97
NEK2P4-201ENST00000425793 RIMS2Q9UQ26 1411 aa9.01□□□□□ -0.97
NEK2P4-201ENST00000425793 ATAD2Q6PL18 1390 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms