RNA–Protein interactions for RNA: ENST00000425254.2

LINC01534-201, Transcript of long intergenic non-protein coding RNA 1534, humanhuman

TSL 2 BASIC

Gene LINC01534, Length 815 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01534-201ENST00000425254 INTS5Q6P9B9 1019 aaKnown RBP20.2■□□□□ 0.82
LINC01534-201ENST00000425254 ANO8Q9HCE9 1232 aaPredicted RBP20.2■□□□□ 0.82
LINC01534-201ENST00000425254 RREB1Q92766 1687 aa20.19■□□□□ 0.82
LINC01534-201ENST00000425254 A1BGP04217 495 aa20.19■□□□□ 0.82
LINC01534-201ENST00000425254 EIF2S2P20042 333 aaKnown RBP20.19■□□□□ 0.82
LINC01534-201ENST00000425254 ZNF827Q17R98 1081 aa20.19■□□□□ 0.82
LINC01534-201ENST00000425254 AMIGO3Q86WK7 504 aa20.19■□□□□ 0.82
LINC01534-201ENST00000425254 NECTIN2Q92692 538 aa20.19■□□□□ 0.82
LINC01534-201ENST00000425254 NBPF26B4DH59 902 aa20.18■□□□□ 0.82
LINC01534-201ENST00000425254 STARD3NLO95772 234 aa20.18■□□□□ 0.82
LINC01534-201ENST00000425254 PIP4K2AP48426 406 aaPredicted RBP20.18■□□□□ 0.82
LINC01534-201ENST00000425254 NBPF14Q5TI25 921 aa20.18■□□□□ 0.82
LINC01534-201ENST00000425254 NBPF10Q6P3W6 841 aaKnown RBP20.18■□□□□ 0.82
LINC01534-201ENST00000425254 NBPF15Q8N660 670 aa20.18■□□□□ 0.82
LINC01534-201ENST00000425254 AKT1S1Q96B36 256 aa20.18■□□□□ 0.82
LINC01534-201ENST00000425254 ZBTB1Q9Y2K1 713 aa20.18■□□□□ 0.82
LINC01534-201ENST00000425254 CNTNAP4Q9C0A0 1308 aa20.18■□□□□ 0.82
LINC01534-201ENST00000425254 PDIA6Q15084 440 aa20.17■□□□□ 0.82
LINC01534-201ENST00000425254 RC3H1Q5TC82 1133 aaKnown RBP20.17■□□□□ 0.82
LINC01534-201ENST00000425254 HDGFL1Q5TGJ6 251 aa20.17■□□□□ 0.82
LINC01534-201ENST00000425254 SMIM5Q71RC9 77 aa20.17■□□□□ 0.82
LINC01534-201ENST00000425254 CCDC87Q9NVE4 849 aa20.17■□□□□ 0.82
LINC01534-201ENST00000425254 SOS1Q07889 1333 aaPredicted RBP20.16■□□□□ 0.82
LINC01534-201ENST00000425254 COL5A3P25940 1745 aaPredicted RBP20.16■□□□□ 0.82
LINC01534-201ENST00000425254 NUP188Q5SRE5 1749 aa20.16■□□□□ 0.82
LINC01534-201ENST00000425254 TCERG1O14776 1098 aaKnown RBP20.15■□□□□ 0.82
LINC01534-201ENST00000425254 PROSER3Q2NL68 480 aa20.15■□□□□ 0.82
LINC01534-201ENST00000425254 C4BP0C0L5 1744 aa20.15■□□□□ 0.82
LINC01534-201ENST00000425254 ANXA1P04083 346 aa20.14■□□□□ 0.81
LINC01534-201ENST00000425254 CANXP27824 592 aaKnown RBP20.14■□□□□ 0.81
LINC01534-201ENST00000425254 LRP10Q7Z4F1 713 aa20.14■□□□□ 0.81
LINC01534-201ENST00000425254 TAF1LQ8IZX4 1826 aa20.13■□□□□ 0.81
LINC01534-201ENST00000425254 GNPATO15228 680 aa20.13■□□□□ 0.81
LINC01534-201ENST00000425254 RPS6KA4O75676 772 aa20.13■□□□□ 0.81
LINC01534-201ENST00000425254 SLC15A2Q16348 729 aa20.13■□□□□ 0.81
LINC01534-201ENST00000425254 AK7Q96M32 723 aa20.13■□□□□ 0.81
LINC01534-201ENST00000425254 CHPF2Q9P2E5 772 aa20.13■□□□□ 0.81
LINC01534-201ENST00000425254 LAMB4A4D0S4 1761 aa20.12■□□□□ 0.81
LINC01534-201ENST00000425254 ERBB4Q15303 1308 aa20.11■□□□□ 0.81
LINC01534-201ENST00000425254 MYL6BP14649 208 aa20.11■□□□□ 0.81
LINC01534-201ENST00000425254 EIF5P55010 431 aaKnown RBP20.11■□□□□ 0.81
LINC01534-201ENST00000425254 CCDC30Q5VVM6 783 aa20.11■□□□□ 0.81
LINC01534-201ENST00000425254 STK32BQ9NY57 414 aa20.11■□□□□ 0.81
LINC01534-201ENST00000425254 MYH14Q7Z406 1995 aaKnown RBP20.11■□□□□ 0.81
LINC01534-201ENST00000425254 CT47B1P0C2W7 299 aaPredicted RBP20.1■□□□□ 0.81
LINC01534-201ENST00000425254 IL6STP40189 918 aaPredicted RBP20.1■□□□□ 0.81
LINC01534-201ENST00000425254 DDX21Q9NR30 783 aaKnown RBP eCLIP20.1■□□□□ 0.81
LINC01534-201ENST00000425254 MSH5O43196 834 aa20.09■□□□□ 0.81
LINC01534-201ENST00000425254 HMGB2P26583 209 aaKnown RBP20.09■□□□□ 0.81
LINC01534-201ENST00000425254 SSH1Q8WYL5 1049 aa20.09■□□□□ 0.81
LINC01534-201ENST00000425254 TFCP2L1Q9NZI6 479 aa20.09■□□□□ 0.81
LINC01534-201ENST00000425254 DBF4Q9UBU7 674 aaPredicted RBP20.09■□□□□ 0.81
LINC01534-201ENST00000425254 RTCBQ9Y3I0 505 aaKnown RBP20.09■□□□□ 0.81
LINC01534-201ENST00000425254 PNPLA7Q6ZV29 1317 aa20.08■□□□□ 0.81
LINC01534-201ENST00000425254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.08■□□□□ 0.81
LINC01534-201ENST00000425254 PHF14O94880 888 aa20.08■□□□□ 0.81
LINC01534-201ENST00000425254 SLC4A2P04920 1241 aa20.07■□□□□ 0.8
LINC01534-201ENST00000425254 RARSP54136 660 aaKnown RBP20.07■□□□□ 0.8
LINC01534-201ENST00000425254 G2E3Q7L622 706 aa20.07■□□□□ 0.8
LINC01534-201ENST00000425254 ARHGEF1Q92888 912 aaKnown RBP20.07■□□□□ 0.8
LINC01534-201ENST00000425254 ZNF428Q96B54 188 aa20.07■□□□□ 0.8
LINC01534-201ENST00000425254 BCL2L13Q9BXK5 485 aa20.07■□□□□ 0.8
LINC01534-201ENST00000425254 PHAXQ9H814 394 aaKnown RBP20.07■□□□□ 0.8
LINC01534-201ENST00000425254 ZNF330Q9Y3S2 320 aaPredicted RBP20.07■□□□□ 0.8
LINC01534-201ENST00000425254 SSFA2P28290 1259 aa20.06■□□□□ 0.8
LINC01534-201ENST00000425254 TTLL7Q6ZT98 887 aa20.06■□□□□ 0.8
LINC01534-201ENST00000425254 COL23A1Q86Y22 540 aaPredicted RBP20.06■□□□□ 0.8
LINC01534-201ENST00000425254 MRPL50Q8N5N7 158 aaKnown RBP20.06■□□□□ 0.8
LINC01534-201ENST00000425254 PDGFDQ9GZP0 370 aaPredicted RBP20.06■□□□□ 0.8
LINC01534-201ENST00000425254 COL15A1P39059 1388 aa20.06■□□□□ 0.8
LINC01534-201ENST00000425254 ALDH1L2Q3SY69 923 aa20.05■□□□□ 0.8
LINC01534-201ENST00000425254 XAGE3Q8WTP9 111 aa20.05■□□□□ 0.8
LINC01534-201ENST00000425254 STK31Q9BXU1 1019 aa20.05■□□□□ 0.8
LINC01534-201ENST00000425254 CHMP4AQ9BY43 222 aa20.05■□□□□ 0.8
LINC01534-201ENST00000425254 HYPKQ9NX55 129 aa20.05■□□□□ 0.8
LINC01534-201ENST00000425254 R3HDM1Q15032 1099 aaKnown RBP20.04■□□□□ 0.8
LINC01534-201ENST00000425254 TRAPPC3LQ5T215 181 aa20.04■□□□□ 0.8
LINC01534-201ENST00000425254 COPS6Q7L5N1 327 aa20.04■□□□□ 0.8
LINC01534-201ENST00000425254 TBC1D2BQ9UPU7 963 aa20.04■□□□□ 0.8
LINC01534-201ENST00000425254 UBR3Q6ZT12 1888 aa20.03■□□□□ 0.8
LINC01534-201ENST00000425254 BCAR3O75815 825 aa20.03■□□□□ 0.8
LINC01534-201ENST00000425254 SRP68Q9UHB9 627 aaKnown RBP20.03■□□□□ 0.8
LINC01534-201ENST00000425254 PSDA5PKW4 1024 aaPredicted RBP20.02■□□□□ 0.8
LINC01534-201ENST00000425254 AIMP1Q12904 312 aaKnown RBP20.02■□□□□ 0.8
LINC01534-201ENST00000425254 DZIP3Q86Y13 1208 aaKnown RBP20.02■□□□□ 0.8
LINC01534-201ENST00000425254 SMC4Q9NTJ3 1288 aa20.02■□□□□ 0.8
LINC01534-201ENST00000425254 FLAD1Q8NFF5 587 aa20.01■□□□□ 0.79
LINC01534-201ENST00000425254 BCL2L12Q9HB09 334 aa20.01■□□□□ 0.79
LINC01534-201ENST00000425254 TUBGCP6Q96RT7 1819 aa20.01■□□□□ 0.79
LINC01534-201ENST00000425254 A0A087WZG4 1122 aa20■□□□□ 0.79
LINC01534-201ENST00000425254 CAMTA2O94983 1202 aa20■□□□□ 0.79
LINC01534-201ENST00000425254 RFC4P35249 363 aa20■□□□□ 0.79
LINC01534-201ENST00000425254 BRPF1P55201 1214 aaPredicted RBP20■□□□□ 0.79
LINC01534-201ENST00000425254 FLIIQ13045 1269 aa20■□□□□ 0.79
LINC01534-201ENST00000425254 ARXQ96QS3 562 aa20■□□□□ 0.79
LINC01534-201ENST00000425254 NARFQ9UHQ1 456 aa20■□□□□ 0.79
LINC01534-201ENST00000425254 RCAN3Q9UKA8 241 aa20■□□□□ 0.79
LINC01534-201ENST00000425254 USP42Q9H9J4 1324 aaKnown RBP20■□□□□ 0.79
LINC01534-201ENST00000425254 HLFQ16534 295 aa19.98■□□□□ 0.79
LINC01534-201ENST00000425254 USPL1Q5W0Q7 1092 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms