RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 NBPF1Q3BBV0 1214 aa5.09□□□□□ -1.6
PMS1-209ENST00000424059 DCAF5Q96JK2 942 aa5.09□□□□□ -1.6
PMS1-209ENST00000424059 RUBCNLQ9H714 662 aa5.09□□□□□ -1.6
PMS1-209ENST00000424059 AVENQ9NQS1 362 aaPredicted RBP5.09□□□□□ -1.6
PMS1-209ENST00000424059 CNTNAP5Q8WYK1 1306 aa5.08□□□□□ -1.6
PMS1-209ENST00000424059 EML3Q32P44 896 aa5.08□□□□□ -1.6
PMS1-209ENST00000424059 TSGA10IPQ3SY00 556 aa5.08□□□□□ -1.6
PMS1-209ENST00000424059 FAM182BQ5T319 152 aa5.08□□□□□ -1.6
PMS1-209ENST00000424059 PCDHGC4Q9Y5F7 938 aa5.08□□□□□ -1.6
PMS1-209ENST00000424059 GPC6Q9Y625 555 aaPredicted RBP5.08□□□□□ -1.6
PMS1-209ENST00000424059 MSTNO14793 375 aa5.07□□□□□ -1.6
PMS1-209ENST00000424059 BACH1O14867 736 aa5.07□□□□□ -1.6
PMS1-209ENST00000424059 TATP17735 454 aaPredicted RBP5.07□□□□□ -1.6
PMS1-209ENST00000424059 EDARADDQ8WWZ3 215 aa5.07□□□□□ -1.6
PMS1-209ENST00000424059 NOD1Q9Y239 953 aa5.07□□□□□ -1.6
PMS1-209ENST00000424059 COG6Q9Y2V7 657 aa5.07□□□□□ -1.6
PMS1-209ENST00000424059 ATP4AP20648 1035 aa5.07□□□□□ -1.6
PMS1-209ENST00000424059 SAMD5Q5TGI4 173 aa5.07□□□□□ -1.6
PMS1-209ENST00000424059 DNAAF2Q9NVR5 837 aaKnown RBP5.07□□□□□ -1.6
PMS1-209ENST00000424059 A6NJY4 79 aa5.06□□□□□ -1.6
PMS1-209ENST00000424059 BNIP3LO60238 219 aa5.06□□□□□ -1.6
PMS1-209ENST00000424059 FAM157BP0CG42 384 aa5.06□□□□□ -1.6
PMS1-209ENST00000424059 LAMC2Q13753 1193 aa5.06□□□□□ -1.6
PMS1-209ENST00000424059 PLA2G4EQ3MJ16 856 aa5.06□□□□□ -1.6
PMS1-209ENST00000424059 ZNF295-AS1Q8N0V1 137 aa5.06□□□□□ -1.6
PMS1-209ENST00000424059 ABHD17AQ96GS6 310 aa5.06□□□□□ -1.6
PMS1-209ENST00000424059 TMEM229AB2RXF0 380 aa5.06□□□□□ -1.6
PMS1-209ENST00000424059 ATXN7O15265 892 aaPredicted RBP5.06□□□□□ -1.6
PMS1-209ENST00000424059 FLIIQ13045 1269 aa5.06□□□□□ -1.6
PMS1-209ENST00000424059 GALNT6Q8NCL4 622 aa5.06□□□□□ -1.6
PMS1-209ENST00000424059 ZCCHC2Q9C0B9 1178 aaKnown RBP5.06□□□□□ -1.6
PMS1-209ENST00000424059 ALG2Q9H553 416 aa5.06□□□□□ -1.6
PMS1-209ENST00000424059 IQSEC3Q9UPP2 1182 aaPredicted RBP5.06□□□□□ -1.6
PMS1-209ENST00000424059 SHISA8B8ZZ34 492 aa5.05□□□□□ -1.6
PMS1-209ENST00000424059 TRIM50Q86XT4 487 aa5.05□□□□□ -1.6
PMS1-209ENST00000424059 PCDHGA11Q9Y5H2 935 aa5.05□□□□□ -1.6
PMS1-209ENST00000424059 A0A1W2PNR3 127 aa5.04□□□□□ -1.6
PMS1-209ENST00000424059 RAD21O60216 631 aa5.04□□□□□ -1.6
PMS1-209ENST00000424059 EPXP11678 715 aa5.04□□□□□ -1.6
PMS1-209ENST00000424059 SKIP12755 728 aa5.04□□□□□ -1.6
PMS1-209ENST00000424059 GGA1Q9UJY5 639 aa5.04□□□□□ -1.6
PMS1-209ENST00000424059 STAU1O95793 577 aaKnown RBP5.04□□□□□ -1.6
PMS1-209ENST00000424059 GTF2IP78347 998 aa5.04□□□□□ -1.6
PMS1-209ENST00000424059 PLEKHM2Q8IWE5 1019 aa5.04□□□□□ -1.6
PMS1-209ENST00000424059 SPOCK3Q9BQ16 436 aa5.04□□□□□ -1.6
PMS1-209ENST00000424059 NOP53Q9NZM5 478 aaKnown RBP5.04□□□□□ -1.6
PMS1-209ENST00000424059 SERTAD1Q9UHV2 236 aa5.04□□□□□ -1.6
PMS1-209ENST00000424059 C2CD2LO14523 706 aa5.03□□□□□ -1.6
PMS1-209ENST00000424059 GNB5O14775 395 aa5.03□□□□□ -1.6
PMS1-209ENST00000424059 ADH6P28332 368 aa5.03□□□□□ -1.6
PMS1-209ENST00000424059 CTBSQ01459 385 aa5.03□□□□□ -1.6
PMS1-209ENST00000424059 TNP2Q05952 138 aa5.03□□□□□ -1.6
PMS1-209ENST00000424059 TEAD4Q15561 434 aa5.03□□□□□ -1.6
PMS1-209ENST00000424059 ZIC5Q96T25 663 aa5.03□□□□□ -1.6
PMS1-209ENST00000424059 CABP1Q9NZU7 370 aa5.03□□□□□ -1.6
PMS1-209ENST00000424059 GJA3Q9Y6H8 435 aa5.03□□□□□ -1.6
PMS1-209ENST00000424059 AMPD1P23109 780 aa5.02□□□□□ -1.61
PMS1-209ENST00000424059 SNRPNP63162 240 aaKnown RBP5.02□□□□□ -1.61
PMS1-209ENST00000424059 LINC00114Q6XXX2 140 aa5.02□□□□□ -1.61
PMS1-209ENST00000424059 C1orf229Q6ZS94 237 aaPredicted RBP5.02□□□□□ -1.61
PMS1-209ENST00000424059 ERICH6Q7L0X2 663 aa5.02□□□□□ -1.61
PMS1-209ENST00000424059 AIDAQ96BJ3 306 aa5.02□□□□□ -1.61
PMS1-209ENST00000424059 BTBD6Q96KE9 485 aa5.02□□□□□ -1.61
PMS1-209ENST00000424059 RRAGCQ9HB90 399 aa5.02□□□□□ -1.61
PMS1-209ENST00000424059 ZNF358Q9NW07 568 aa5.02□□□□□ -1.61
PMS1-209ENST00000424059 SCHIP1Q9P0W5 487 aaPredicted RBP5.02□□□□□ -1.61
PMS1-209ENST00000424059 USP17L5A8MUK1 530 aa5.02□□□□□ -1.61
PMS1-209ENST00000424059 PIK3CDO00329 1044 aa5.02□□□□□ -1.61
PMS1-209ENST00000424059 PROCP04070 461 aa5.02□□□□□ -1.61
PMS1-209ENST00000424059 MAPTP10636 758 aaKnown RBP5.02□□□□□ -1.61
PMS1-209ENST00000424059 ATP1A2P50993 1020 aa5.02□□□□□ -1.61
PMS1-209ENST00000424059 ARSJQ5FYB0 599 aaPredicted RBP5.02□□□□□ -1.61
PMS1-209ENST00000424059 M0R2N6 131 aa5.01□□□□□ -1.61
PMS1-209ENST00000424059 ITGB2P05107 769 aa5.01□□□□□ -1.61
PMS1-209ENST00000424059 HOXB4P17483 251 aaPredicted RBP5.01□□□□□ -1.61
PMS1-209ENST00000424059 PSME1Q06323 249 aa5.01□□□□□ -1.61
PMS1-209ENST00000424059 KHNYNO15037 678 aaKnown RBP5.01□□□□□ -1.61
PMS1-209ENST00000424059 EFSO43281 561 aa5.01□□□□□ -1.61
PMS1-209ENST00000424059 DGKGP49619 791 aa5.01□□□□□ -1.61
PMS1-209ENST00000424059 EPHA4P54764 986 aa5.01□□□□□ -1.61
PMS1-209ENST00000424059 NCOA4Q13772 614 aa5.01□□□□□ -1.61
PMS1-209ENST00000424059 ZNF468Q5VIY5 522 aaPredicted RBP5.01□□□□□ -1.61
PMS1-209ENST00000424059 EML1O00423 815 aa5□□□□□ -1.61
PMS1-209ENST00000424059 HIRAP54198 1017 aaPredicted RBP5□□□□□ -1.61
PMS1-209ENST00000424059 DCDC2BA2VCK2 349 aa4.99□□□□□ -1.61
PMS1-209ENST00000424059 KRBA1A5PL33 1030 aa4.99□□□□□ -1.61
PMS1-209ENST00000424059 NEURL1BA8MQ27 555 aa4.99□□□□□ -1.61
PMS1-209ENST00000424059 ADAM23O75077 832 aa4.99□□□□□ -1.61
PMS1-209ENST00000424059 UBTFP17480 764 aaKnown RBP4.99□□□□□ -1.61
PMS1-209ENST00000424059 C1orf53Q5VUE5 145 aa4.99□□□□□ -1.61
PMS1-209ENST00000424059 BICDL1Q6ZP65 573 aa4.99□□□□□ -1.61
PMS1-209ENST00000424059 SLC9A9Q8IVB4 645 aa4.99□□□□□ -1.61
PMS1-209ENST00000424059 MARK1Q9P0L2 795 aa4.99□□□□□ -1.61
PMS1-209ENST00000424059 CHMP3Q9Y3E7 222 aa4.99□□□□□ -1.61
PMS1-209ENST00000424059 USP3Q9Y6I4 520 aa4.99□□□□□ -1.61
PMS1-209ENST00000424059 CD33P20138 364 aa4.99□□□□□ -1.61
PMS1-209ENST00000424059 COL8A1P27658 744 aa4.99□□□□□ -1.61
PMS1-209ENST00000424059 NOS2P35228 1153 aa4.99□□□□□ -1.61
PMS1-209ENST00000424059 POTEAQ6S8J7 498 aa4.99□□□□□ -1.61
PMS1-209ENST00000424059 CHSY3Q70JA7 882 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms