RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 CFHR5Q9BXR6 569 aa9.74□□□□□ -0.85
LINC00458-201ENST00000423442 FHDC1Q9C0D6 1143 aaPredicted RBP9.74□□□□□ -0.85
LINC00458-201ENST00000423442 LRRC4BQ9NT99 713 aa9.74□□□□□ -0.85
LINC00458-201ENST00000423442 PRG4Q92954 1404 aaPredicted RBP9.73□□□□□ -0.85
LINC00458-201ENST00000423442 A0A1B0GTH6 734 aa9.73□□□□□ -0.85
LINC00458-201ENST00000423442 UBAP2LQ14157 1087 aaKnown RBP9.73□□□□□ -0.85
LINC00458-201ENST00000423442 C4orf17Q53FE4 359 aa9.73□□□□□ -0.85
LINC00458-201ENST00000423442 TMEM214Q6NUQ4 689 aaKnown RBP9.73□□□□□ -0.85
LINC00458-201ENST00000423442 C1orf229Q6ZS94 237 aaPredicted RBP9.73□□□□□ -0.85
LINC00458-201ENST00000423442 RUBCNLQ9H714 662 aa9.73□□□□□ -0.85
LINC00458-201ENST00000423442 KDM6BO15054 1643 aa9.73□□□□□ -0.85
LINC00458-201ENST00000423442 SHISA8B8ZZ34 492 aa9.72□□□□□ -0.85
LINC00458-201ENST00000423442 MAP2K3P46734 347 aa9.72□□□□□ -0.85
LINC00458-201ENST00000423442 KLRG1Q96E93 195 aa9.72□□□□□ -0.85
LINC00458-201ENST00000423442 TBC1D2BQ9UPU7 963 aa9.72□□□□□ -0.85
LINC00458-201ENST00000423442 DIP2BQ9P265 1576 aa9.71□□□□□ -0.85
LINC00458-201ENST00000423442 APBB1O00213 710 aa9.71□□□□□ -0.86
LINC00458-201ENST00000423442 MSX1P28360 303 aa9.71□□□□□ -0.86
LINC00458-201ENST00000423442 GNASQ5JWF2 1037 aa9.71□□□□□ -0.86
LINC00458-201ENST00000423442 XP32Q5T750 250 aa9.71□□□□□ -0.86
LINC00458-201ENST00000423442 FHAD1B1AJZ9 1412 aa9.71□□□□□ -0.86
LINC00458-201ENST00000423442 TSPOAP1O95153 1857 aa9.7□□□□□ -0.86
LINC00458-201ENST00000423442 PHTF2Q8N3S3 785 aa9.7□□□□□ -0.86
LINC00458-201ENST00000423442 GALNT6Q8NCL4 622 aa9.7□□□□□ -0.86
LINC00458-201ENST00000423442 ETNK1Q9HBU6 452 aa9.7□□□□□ -0.86
LINC00458-201ENST00000423442 MAPKBP1O60336 1514 aa9.69□□□□□ -0.86
LINC00458-201ENST00000423442 PROCP04070 461 aa9.69□□□□□ -0.86
LINC00458-201ENST00000423442 GTF2E1P29083 439 aaPredicted RBP9.69□□□□□ -0.86
LINC00458-201ENST00000423442 DOLKQ9UPQ8 538 aa9.69□□□□□ -0.86
LINC00458-201ENST00000423442 PHF24Q9UPV7 400 aa9.69□□□□□ -0.86
LINC00458-201ENST00000423442 C2CD2LO14523 706 aa9.68□□□□□ -0.86
LINC00458-201ENST00000423442 CSB-PGBD3P0DP91 1061 aa9.68□□□□□ -0.86
LINC00458-201ENST00000423442 ESCO1Q5FWF5 840 aa9.68□□□□□ -0.86
LINC00458-201ENST00000423442 PGBD3Q8N328 593 aa9.68□□□□□ -0.86
LINC00458-201ENST00000423442 ABHD17AQ96GS6 310 aa9.68□□□□□ -0.86
LINC00458-201ENST00000423442 WRNQ14191 1432 aaPredicted RBP eCLIP9.67□□□□□ -0.86
LINC00458-201ENST00000423442 USP4Q13107 963 aa9.67□□□□□ -0.86
LINC00458-201ENST00000423442 IRF5Q13568 498 aa9.67□□□□□ -0.86
LINC00458-201ENST00000423442 ADCY10Q96PN6 1610 aa9.67□□□□□ -0.86
LINC00458-201ENST00000423442 EIF4G2P78344 907 aaKnown RBP eCLIP9.66□□□□□ -0.86
LINC00458-201ENST00000423442 LBRQ14739 615 aaKnown RBP9.66□□□□□ -0.86
LINC00458-201ENST00000423442 TLR1Q15399 786 aa9.66□□□□□ -0.86
LINC00458-201ENST00000423442 SLFNL1Q499Z3 407 aa9.66□□□□□ -0.86
LINC00458-201ENST00000423442 OXLD1Q5BKU9 147 aa9.66□□□□□ -0.86
LINC00458-201ENST00000423442 PPARGC1BQ86YN6 1023 aaKnown RBP9.66□□□□□ -0.86
LINC00458-201ENST00000423442 RHBDD1Q8TEB9 315 aa9.66□□□□□ -0.86
LINC00458-201ENST00000423442 EDARADDQ8WWZ3 215 aa9.66□□□□□ -0.86
LINC00458-201ENST00000423442 RRAGCQ9HB90 399 aa9.66□□□□□ -0.86
LINC00458-201ENST00000423442 KRBA1A5PL33 1030 aa9.65□□□□□ -0.86
LINC00458-201ENST00000423442 BNIP3LO60238 219 aa9.65□□□□□ -0.86
LINC00458-201ENST00000423442 CTBSQ01459 385 aa9.65□□□□□ -0.86
LINC00458-201ENST00000423442 EFHC2Q5JST6 749 aa9.65□□□□□ -0.86
LINC00458-201ENST00000423442 RNF135Q8IUD6 432 aa9.65□□□□□ -0.86
LINC00458-201ENST00000423442 GDF2Q9UK05 429 aaPredicted RBP9.65□□□□□ -0.86
LINC00458-201ENST00000423442 ATXN7L1Q9ULK2 861 aaPredicted RBP9.65□□□□□ -0.86
LINC00458-201ENST00000423442 ERICH3Q5RHP9 1530 aa9.65□□□□□ -0.86
LINC00458-201ENST00000423442 BMP4P12644 408 aa9.64□□□□□ -0.87
LINC00458-201ENST00000423442 COL8A1P27658 744 aa9.64□□□□□ -0.87
LINC00458-201ENST00000423442 NDFIP2Q9NV92 336 aa9.64□□□□□ -0.87
LINC00458-201ENST00000423442 MKL2Q9ULH7 1088 aa9.64□□□□□ -0.87
LINC00458-201ENST00000423442 FGFR3P22607 806 aa9.63□□□□□ -0.87
LINC00458-201ENST00000423442 PLA2G4AP47712 749 aa9.63□□□□□ -0.87
LINC00458-201ENST00000423442 VAC14Q08AM6 782 aa9.63□□□□□ -0.87
LINC00458-201ENST00000423442 GOLGA6L1Q8N7Z2 621 aa9.63□□□□□ -0.87
LINC00458-201ENST00000423442 GGA1Q9UJY5 639 aa9.63□□□□□ -0.87
LINC00458-201ENST00000423442 RUSC2Q8N2Y8 1516 aa9.62□□□□□ -0.87
LINC00458-201ENST00000423442 ADGRL1O94910 1474 aa9.62□□□□□ -0.87
LINC00458-201ENST00000423442 HOXB4P17483 251 aaPredicted RBP9.62□□□□□ -0.87
LINC00458-201ENST00000423442 SCNN1DP51172 638 aa9.62□□□□□ -0.87
LINC00458-201ENST00000423442 CRISPLD1Q9H336 500 aa9.62□□□□□ -0.87
LINC00458-201ENST00000423442 CHIC2Q9UKJ5 165 aa9.62□□□□□ -0.87
LINC00458-201ENST00000423442 BIVM-ERCC5R4GMW8 1640 aa9.61□□□□□ -0.87
LINC00458-201ENST00000423442 HECW2Q9P2P5 1572 aa9.61□□□□□ -0.87
LINC00458-201ENST00000423442 TOP2BQ02880 1626 aa9.6□□□□□ -0.87
LINC00458-201ENST00000423442 AMPD1P23109 780 aa9.6□□□□□ -0.87
LINC00458-201ENST00000423442 GDF10P55107 478 aa9.6□□□□□ -0.87
LINC00458-201ENST00000423442 LINC00114Q6XXX2 140 aa9.6□□□□□ -0.87
LINC00458-201ENST00000423442 TBC1D9Q6ZT07 1266 aa9.6□□□□□ -0.87
LINC00458-201ENST00000423442 SUV39H2Q9H5I1 410 aa9.6□□□□□ -0.87
LINC00458-201ENST00000423442 DNAAF2Q9NVR5 837 aaKnown RBP9.6□□□□□ -0.87
LINC00458-201ENST00000423442 K7ELQ4 463 aaPredicted RBP9.59□□□□□ -0.87
LINC00458-201ENST00000423442 INHAP05111 366 aa9.59□□□□□ -0.87
LINC00458-201ENST00000423442 ATP4AP20648 1035 aa9.59□□□□□ -0.87
LINC00458-201ENST00000423442 SLCO4C1Q6ZQN7 724 aa9.59□□□□□ -0.87
LINC00458-201ENST00000423442 AIDAQ96BJ3 306 aa9.59□□□□□ -0.87
LINC00458-201ENST00000423442 ZCCHC2Q9C0B9 1178 aaKnown RBP9.59□□□□□ -0.87
LINC00458-201ENST00000423442 GDPD2Q9HCC8 539 aa9.59□□□□□ -0.87
LINC00458-201ENST00000423442 PRM3Q9NNZ6 103 aa9.59□□□□□ -0.87
LINC00458-201ENST00000423442 GRIN2CQ14957 1233 aa9.58□□□□□ -0.88
LINC00458-201ENST00000423442 SIRT1Q96EB6 747 aa9.58□□□□□ -0.88
LINC00458-201ENST00000423442 HCN2Q9UL51 889 aa9.58□□□□□ -0.88
LINC00458-201ENST00000423442 ABL2P42684 1182 aa9.57□□□□□ -0.88
LINC00458-201ENST00000423442 BAG6P46379 1132 aa9.57□□□□□ -0.88
LINC00458-201ENST00000423442 ALYREFQ86V81 257 aaKnown RBP9.57□□□□□ -0.88
LINC00458-201ENST00000423442 BTBD6Q96KE9 485 aa9.57□□□□□ -0.88
LINC00458-201ENST00000423442 SERTAD1Q9UHV2 236 aa9.57□□□□□ -0.88
LINC00458-201ENST00000423442 PCDHGC4Q9Y5F7 938 aa9.57□□□□□ -0.88
LINC00458-201ENST00000423442 PPRC1Q5VV67 1664 aaKnown RBP9.57□□□□□ -0.88
LINC00458-201ENST00000423442 NEURL1BA8MQ27 555 aa9.56□□□□□ -0.88
LINC00458-201ENST00000423442 EPXP11678 715 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms